Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15015 and IAI46_15020 are separated by 0 nucleotides IAI46_15020 and IAI46_15025 are separated by 110 nucleotides IAI46_15025 and IAI46_15030 overlap by 4 nucleotides IAI46_15030 and IAI46_15035 are separated by 57 nucleotides IAI46_15035 and IAI46_15040 are separated by 3 nucleotides
IAI46_15015: IAI46_15015 - DUF3383 domain-containing protein, at 3,168,102 to 3,169,583
_15015
IAI46_15020: IAI46_15020 - hypothetical protein, at 3,169,584 to 3,170,015
_15020
IAI46_15025: IAI46_15025 - hypothetical protein, at 3,170,126 to 3,170,494
_15025
IAI46_15030: IAI46_15030 - hypothetical protein, at 3,170,491 to 3,170,895
_15030
IAI46_15035: IAI46_15035 - DUF4054 domain-containing protein, at 3,170,953 to 3,171,396
_15035
IAI46_15040: IAI46_15040 - hypothetical protein, at 3,171,400 to 3,171,741
_15040
Position (kb)
3170
3171 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3169.148 kb on + strand, within IAI46_15015 at 3169.148 kb on + strand, within IAI46_15015 at 3169.151 kb on + strand, within IAI46_15015 at 3169.178 kb on + strand, within IAI46_15015 at 3169.188 kb on + strand, within IAI46_15015 at 3169.189 kb on - strand, within IAI46_15015 at 3169.189 kb on - strand, within IAI46_15015 at 3169.229 kb on + strand, within IAI46_15015 at 3169.230 kb on - strand, within IAI46_15015 at 3169.230 kb on - strand, within IAI46_15015 at 3169.235 kb on + strand, within IAI46_15015 at 3169.372 kb on + strand, within IAI46_15015 at 3169.373 kb on - strand, within IAI46_15015 at 3169.384 kb on + strand, within IAI46_15015 at 3169.434 kb on + strand, within IAI46_15015 at 3169.586 kb on - strand at 3169.611 kb on - strand at 3169.620 kb on + strand at 3169.624 kb on - strand at 3169.677 kb on + strand, within IAI46_15020 at 3169.715 kb on - strand, within IAI46_15020 at 3169.762 kb on + strand, within IAI46_15020 at 3169.763 kb on - strand, within IAI46_15020 at 3169.772 kb on + strand, within IAI46_15020 at 3169.827 kb on - strand, within IAI46_15020 at 3169.827 kb on - strand, within IAI46_15020 at 3169.896 kb on - strand, within IAI46_15020 at 3169.945 kb on + strand, within IAI46_15020 at 3169.946 kb on - strand, within IAI46_15020 at 3170.055 kb on + strand at 3170.056 kb on - strand at 3170.056 kb on - strand at 3170.058 kb on + strand at 3170.114 kb on + strand at 3170.127 kb on + strand at 3170.128 kb on - strand at 3170.220 kb on - strand, within IAI46_15025 at 3170.243 kb on - strand, within IAI46_15025 at 3170.277 kb on + strand, within IAI46_15025 at 3170.277 kb on + strand, within IAI46_15025 at 3170.278 kb on - strand, within IAI46_15025 at 3170.348 kb on + strand, within IAI46_15025 at 3170.376 kb on + strand, within IAI46_15025 at 3170.376 kb on + strand, within IAI46_15025 at 3170.377 kb on - strand, within IAI46_15025 at 3170.377 kb on - strand, within IAI46_15025 at 3170.407 kb on + strand, within IAI46_15025 at 3170.408 kb on - strand, within IAI46_15025 at 3170.410 kb on + strand, within IAI46_15025 at 3170.410 kb on + strand, within IAI46_15025 at 3170.411 kb on - strand, within IAI46_15025 at 3170.411 kb on - strand, within IAI46_15025 at 3170.411 kb on - strand, within IAI46_15025 at 3170.462 kb on + strand at 3170.527 kb on - strand at 3170.583 kb on - strand, within IAI46_15030 at 3170.591 kb on - strand, within IAI46_15030 at 3170.616 kb on + strand, within IAI46_15030 at 3170.711 kb on - strand, within IAI46_15030 at 3170.730 kb on + strand, within IAI46_15030 at 3170.731 kb on - strand, within IAI46_15030 at 3170.743 kb on - strand, within IAI46_15030 at 3170.819 kb on + strand, within IAI46_15030 at 3170.887 kb on - strand at 3170.981 kb on + strand at 3170.988 kb on - strand at 3170.988 kb on - strand at 3170.988 kb on - strand at 3170.993 kb on + strand at 3170.994 kb on - strand at 3170.994 kb on - strand at 3170.997 kb on + strand at 3170.997 kb on + strand at 3170.998 kb on - strand, within IAI46_15035 at 3170.998 kb on - strand, within IAI46_15035 at 3170.998 kb on - strand, within IAI46_15035 at 3171.069 kb on - strand, within IAI46_15035 at 3171.102 kb on + strand, within IAI46_15035 at 3171.102 kb on + strand, within IAI46_15035 at 3171.102 kb on + strand, within IAI46_15035 at 3171.103 kb on - strand, within IAI46_15035 at 3171.103 kb on - strand, within IAI46_15035 at 3171.103 kb on - strand, within IAI46_15035 at 3171.103 kb on - strand, within IAI46_15035 at 3171.236 kb on + strand, within IAI46_15035 at 3171.236 kb on + strand, within IAI46_15035 at 3171.237 kb on - strand, within IAI46_15035 at 3171.237 kb on - strand, within IAI46_15035 at 3171.238 kb on + strand, within IAI46_15035 at 3171.238 kb on + strand, within IAI46_15035 at 3171.239 kb on - strand, within IAI46_15035 at 3171.239 kb on - strand, within IAI46_15035 at 3171.239 kb on - strand, within IAI46_15035 at 3171.283 kb on - strand, within IAI46_15035 at 3171.287 kb on - strand, within IAI46_15035 at 3171.291 kb on - strand, within IAI46_15035 at 3171.312 kb on - strand, within IAI46_15035 at 3171.335 kb on - strand, within IAI46_15035 at 3171.390 kb on + strand at 3171.427 kb on - strand at 3171.484 kb on + strand, within IAI46_15040
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,169,148 + IAI46_15015 0.71 +0.7 3,169,148 + IAI46_15015 0.71 +0.6 3,169,151 + IAI46_15015 0.71 +0.3 3,169,178 + IAI46_15015 0.73 -0.2 3,169,188 + IAI46_15015 0.73 +0.9 3,169,189 - IAI46_15015 0.73 +0.1 3,169,189 - IAI46_15015 0.73 +1.8 3,169,229 + IAI46_15015 0.76 +1.8 3,169,230 - IAI46_15015 0.76 +1.0 3,169,230 - IAI46_15015 0.76 +1.6 3,169,235 + IAI46_15015 0.76 +0.1 3,169,372 + IAI46_15015 0.86 +1.4 3,169,373 - IAI46_15015 0.86 +0.4 3,169,384 + IAI46_15015 0.87 -1.3 3,169,434 + IAI46_15015 0.90 +0.9 3,169,586 - +1.2 3,169,611 - +0.5 3,169,620 + +0.7 3,169,624 - -0.1 3,169,677 + IAI46_15020 0.22 -0.9 3,169,715 - IAI46_15020 0.30 +1.3 3,169,762 + IAI46_15020 0.41 -0.3 3,169,763 - IAI46_15020 0.41 +2.1 3,169,772 + IAI46_15020 0.44 +0.6 3,169,827 - IAI46_15020 0.56 +1.9 3,169,827 - IAI46_15020 0.56 +1.4 3,169,896 - IAI46_15020 0.72 +0.3 3,169,945 + IAI46_15020 0.84 +0.2 3,169,946 - IAI46_15020 0.84 +0.8 3,170,055 + +1.1 3,170,056 - +2.0 3,170,056 - +0.6 3,170,058 + +1.9 3,170,114 + +1.4 3,170,127 + +2.0 3,170,128 - +1.0 3,170,220 - IAI46_15025 0.25 +0.6 3,170,243 - IAI46_15025 0.32 +0.5 3,170,277 + IAI46_15025 0.41 -0.6 3,170,277 + IAI46_15025 0.41 -0.0 3,170,278 - IAI46_15025 0.41 +0.6 3,170,348 + IAI46_15025 0.60 -0.9 3,170,376 + IAI46_15025 0.68 -0.1 3,170,376 + IAI46_15025 0.68 +0.7 3,170,377 - IAI46_15025 0.68 +0.7 3,170,377 - IAI46_15025 0.68 -0.0 3,170,407 + IAI46_15025 0.76 +0.4 3,170,408 - IAI46_15025 0.76 +1.1 3,170,410 + IAI46_15025 0.77 +0.6 3,170,410 + IAI46_15025 0.77 +2.0 3,170,411 - IAI46_15025 0.77 +1.0 3,170,411 - IAI46_15025 0.77 +1.0 3,170,411 - IAI46_15025 0.77 -0.6 3,170,462 + -0.5 3,170,527 - +0.6 3,170,583 - IAI46_15030 0.23 -1.4 3,170,591 - IAI46_15030 0.25 +2.1 3,170,616 + IAI46_15030 0.31 +0.1 3,170,711 - IAI46_15030 0.54 -0.4 3,170,730 + IAI46_15030 0.59 +1.2 3,170,731 - IAI46_15030 0.59 -1.1 3,170,743 - IAI46_15030 0.62 +0.4 3,170,819 + IAI46_15030 0.81 +0.7 3,170,887 - +0.4 3,170,981 + +0.6 3,170,988 - +0.9 3,170,988 - +1.0 3,170,988 - +1.9 3,170,993 + +0.4 3,170,994 - +1.1 3,170,994 - +1.9 3,170,997 + -0.4 3,170,997 + +1.4 3,170,998 - IAI46_15035 0.10 +1.0 3,170,998 - IAI46_15035 0.10 -0.7 3,170,998 - IAI46_15035 0.10 +0.8 3,171,069 - IAI46_15035 0.26 -0.0 3,171,102 + IAI46_15035 0.34 +0.7 3,171,102 + IAI46_15035 0.34 -0.3 3,171,102 + IAI46_15035 0.34 +0.5 3,171,103 - IAI46_15035 0.34 +1.8 3,171,103 - IAI46_15035 0.34 -0.2 3,171,103 - IAI46_15035 0.34 +0.5 3,171,103 - IAI46_15035 0.34 -0.6 3,171,236 + IAI46_15035 0.64 -2.4 3,171,236 + IAI46_15035 0.64 +0.4 3,171,237 - IAI46_15035 0.64 +0.5 3,171,237 - IAI46_15035 0.64 -0.4 3,171,238 + IAI46_15035 0.64 +0.3 3,171,238 + IAI46_15035 0.64 -0.2 3,171,239 - IAI46_15035 0.64 +0.4 3,171,239 - IAI46_15035 0.64 +0.3 3,171,239 - IAI46_15035 0.64 +0.9 3,171,283 - IAI46_15035 0.74 +0.3 3,171,287 - IAI46_15035 0.75 +0.7 3,171,291 - IAI46_15035 0.76 +0.2 3,171,312 - IAI46_15035 0.81 -0.3 3,171,335 - IAI46_15035 0.86 +0.2 3,171,390 + +2.0 3,171,427 - +0.1 3,171,484 + IAI46_15040 0.25 +1.9
Or see this region's nucleotide sequence