Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13580 and IAI46_13585 are separated by 0 nucleotides IAI46_13585 and IAI46_13590 are separated by 48 nucleotides IAI46_13590 and IAI46_13595 are separated by 75 nucleotides
IAI46_13580: IAI46_13580 - DUF1833 family protein, at 2,901,904 to 2,902,374
_13580
IAI46_13585: IAI46_13585 - hypothetical protein, at 2,902,375 to 2,902,842
_13585
IAI46_13590: IAI46_13590 - hypothetical protein, at 2,902,891 to 2,903,319
_13590
IAI46_13595: IAI46_13595 - tape measure protein, at 2,903,395 to 2,906,580
_13595
Position (kb)
2902
2903
2904 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2901.942 kb on - strand at 2902.054 kb on - strand, within IAI46_13580 at 2902.082 kb on + strand, within IAI46_13580 at 2902.082 kb on + strand, within IAI46_13580 at 2902.233 kb on + strand, within IAI46_13580 at 2902.235 kb on + strand, within IAI46_13580 at 2902.236 kb on - strand, within IAI46_13580 at 2902.236 kb on - strand, within IAI46_13580 at 2902.289 kb on + strand, within IAI46_13580 at 2902.289 kb on + strand, within IAI46_13580 at 2902.307 kb on + strand, within IAI46_13580 at 2902.435 kb on + strand, within IAI46_13585 at 2902.475 kb on + strand, within IAI46_13585 at 2902.537 kb on + strand, within IAI46_13585 at 2902.665 kb on + strand, within IAI46_13585 at 2902.834 kb on + strand at 2902.962 kb on - strand, within IAI46_13590 at 2902.962 kb on - strand, within IAI46_13590 at 2903.013 kb on - strand, within IAI46_13590 at 2903.019 kb on + strand, within IAI46_13590 at 2903.019 kb on + strand, within IAI46_13590 at 2903.072 kb on + strand, within IAI46_13590 at 2903.072 kb on + strand, within IAI46_13590 at 2903.073 kb on - strand, within IAI46_13590 at 2903.076 kb on - strand, within IAI46_13590 at 2903.076 kb on - strand, within IAI46_13590 at 2903.095 kb on - strand, within IAI46_13590 at 2903.116 kb on - strand, within IAI46_13590 at 2903.192 kb on - strand, within IAI46_13590 at 2903.197 kb on + strand, within IAI46_13590 at 2903.197 kb on + strand, within IAI46_13590 at 2903.198 kb on - strand, within IAI46_13590 at 2903.198 kb on - strand, within IAI46_13590 at 2903.203 kb on - strand, within IAI46_13590 at 2903.214 kb on + strand, within IAI46_13590 at 2903.214 kb on + strand, within IAI46_13590 at 2903.240 kb on + strand, within IAI46_13590 at 2903.241 kb on - strand, within IAI46_13590 at 2903.255 kb on + strand, within IAI46_13590 at 2903.302 kb on - strand at 2903.302 kb on - strand at 2903.324 kb on - strand at 2903.354 kb on - strand at 2903.360 kb on + strand at 2903.383 kb on - strand at 2903.384 kb on + strand at 2903.385 kb on - strand at 2903.385 kb on - strand at 2903.392 kb on + strand at 2903.427 kb on - strand at 2903.427 kb on - strand at 2903.427 kb on - strand at 2903.427 kb on - strand at 2903.446 kb on + strand at 2903.446 kb on + strand at 2903.446 kb on + strand at 2903.446 kb on + strand at 2903.446 kb on + strand at 2903.465 kb on - strand at 2903.480 kb on - strand at 2903.485 kb on + strand at 2903.486 kb on - strand at 2903.516 kb on - strand at 2903.522 kb on + strand at 2903.569 kb on + strand at 2903.636 kb on + strand at 2903.636 kb on + strand at 2903.693 kb on + strand at 2903.694 kb on - strand at 2903.694 kb on - strand at 2903.768 kb on - strand, within IAI46_13595 at 2903.768 kb on - strand, within IAI46_13595 at 2903.768 kb on - strand, within IAI46_13595 at 2903.768 kb on - strand, within IAI46_13595 at 2903.854 kb on - strand, within IAI46_13595 at 2903.854 kb on - strand, within IAI46_13595 at 2904.009 kb on + strand, within IAI46_13595 at 2904.079 kb on + strand, within IAI46_13595 at 2904.142 kb on - strand, within IAI46_13595 at 2904.221 kb on - strand, within IAI46_13595 at 2904.221 kb on - strand, within IAI46_13595 at 2904.221 kb on - strand, within IAI46_13595 at 2904.307 kb on + strand, within IAI46_13595
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,901,942 - +0.0 2,902,054 - IAI46_13580 0.32 +1.0 2,902,082 + IAI46_13580 0.38 -0.7 2,902,082 + IAI46_13580 0.38 +0.6 2,902,233 + IAI46_13580 0.70 +0.3 2,902,235 + IAI46_13580 0.70 +1.6 2,902,236 - IAI46_13580 0.70 +0.9 2,902,236 - IAI46_13580 0.70 +0.1 2,902,289 + IAI46_13580 0.82 +1.4 2,902,289 + IAI46_13580 0.82 +0.0 2,902,307 + IAI46_13580 0.86 +0.3 2,902,435 + IAI46_13585 0.13 +0.7 2,902,475 + IAI46_13585 0.21 +1.6 2,902,537 + IAI46_13585 0.35 +0.0 2,902,665 + IAI46_13585 0.62 +0.7 2,902,834 + -0.5 2,902,962 - IAI46_13590 0.17 +0.8 2,902,962 - IAI46_13590 0.17 +0.8 2,903,013 - IAI46_13590 0.28 +0.3 2,903,019 + IAI46_13590 0.30 +1.2 2,903,019 + IAI46_13590 0.30 +1.1 2,903,072 + IAI46_13590 0.42 +2.0 2,903,072 + IAI46_13590 0.42 +0.9 2,903,073 - IAI46_13590 0.42 +1.0 2,903,076 - IAI46_13590 0.43 +0.5 2,903,076 - IAI46_13590 0.43 +1.3 2,903,095 - IAI46_13590 0.48 +0.9 2,903,116 - IAI46_13590 0.52 +0.7 2,903,192 - IAI46_13590 0.70 +0.9 2,903,197 + IAI46_13590 0.71 +0.3 2,903,197 + IAI46_13590 0.71 +0.9 2,903,198 - IAI46_13590 0.72 +0.6 2,903,198 - IAI46_13590 0.72 +1.0 2,903,203 - IAI46_13590 0.73 -0.0 2,903,214 + IAI46_13590 0.75 +0.2 2,903,214 + IAI46_13590 0.75 -1.8 2,903,240 + IAI46_13590 0.81 -0.0 2,903,241 - IAI46_13590 0.82 +0.6 2,903,255 + IAI46_13590 0.85 +0.0 2,903,302 - +0.5 2,903,302 - +0.1 2,903,324 - +1.3 2,903,354 - -0.0 2,903,360 + -3.9 2,903,383 - -0.9 2,903,384 + -1.0 2,903,385 - +1.9 2,903,385 - +0.5 2,903,392 + +0.6 2,903,427 - -0.1 2,903,427 - +0.2 2,903,427 - +0.2 2,903,427 - +0.3 2,903,446 + +1.1 2,903,446 + -0.7 2,903,446 + +0.7 2,903,446 + +0.3 2,903,446 + +0.7 2,903,465 - +0.9 2,903,480 - -0.2 2,903,485 + +0.2 2,903,486 - +0.7 2,903,516 - +0.4 2,903,522 + -0.7 2,903,569 + +1.9 2,903,636 + +0.8 2,903,636 + +1.2 2,903,693 + +0.6 2,903,694 - -0.4 2,903,694 - +0.4 2,903,768 - IAI46_13595 0.12 -0.2 2,903,768 - IAI46_13595 0.12 +0.5 2,903,768 - IAI46_13595 0.12 +1.1 2,903,768 - IAI46_13595 0.12 +0.1 2,903,854 - IAI46_13595 0.14 -0.3 2,903,854 - IAI46_13595 0.14 +0.6 2,904,009 + IAI46_13595 0.19 +0.1 2,904,079 + IAI46_13595 0.21 -1.8 2,904,142 - IAI46_13595 0.23 +0.5 2,904,221 - IAI46_13595 0.26 +0.3 2,904,221 - IAI46_13595 0.26 +0.2 2,904,221 - IAI46_13595 0.26 +1.2 2,904,307 + IAI46_13595 0.29 +0.4
Or see this region's nucleotide sequence