Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12340 and IAI46_12345 are separated by 855 nucleotides IAI46_12345 and IAI46_12350 are separated by 132 nucleotides
IAI46_12340: IAI46_12340 - glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase, at 2,619,060 to 2,621,495
_12340
IAI46_12345: IAI46_12345 - LysR family transcriptional regulator, at 2,622,351 to 2,623,238
_12345
IAI46_12350: IAI46_12350 - zinc-binding dehydrogenase, at 2,623,371 to 2,624,357
_12350
Position (kb)
2622
2623
2624 Strain fitness (log2 ratio)
-2
-1
0
1 at 2621.363 kb on - strand at 2621.466 kb on + strand at 2621.642 kb on + strand at 2621.667 kb on - strand at 2621.786 kb on - strand at 2621.811 kb on - strand at 2621.822 kb on - strand at 2621.846 kb on - strand at 2621.881 kb on - strand at 2621.906 kb on + strand at 2621.906 kb on + strand at 2622.000 kb on + strand at 2622.043 kb on + strand at 2622.043 kb on + strand at 2622.057 kb on - strand at 2622.059 kb on - strand at 2622.215 kb on + strand at 2622.240 kb on + strand at 2622.248 kb on + strand at 2622.373 kb on + strand at 2622.455 kb on + strand, within IAI46_12345 at 2622.487 kb on - strand, within IAI46_12345 at 2622.540 kb on + strand, within IAI46_12345 at 2622.580 kb on - strand, within IAI46_12345 at 2622.733 kb on - strand, within IAI46_12345 at 2622.735 kb on + strand, within IAI46_12345 at 2622.736 kb on - strand, within IAI46_12345 at 2622.767 kb on - strand, within IAI46_12345 at 2622.767 kb on - strand, within IAI46_12345 at 2622.791 kb on + strand, within IAI46_12345 at 2622.972 kb on - strand, within IAI46_12345 at 2623.045 kb on + strand, within IAI46_12345 at 2623.239 kb on - strand at 2623.331 kb on + strand at 2623.659 kb on + strand, within IAI46_12350 at 2623.660 kb on - strand, within IAI46_12350 at 2623.752 kb on + strand, within IAI46_12350 at 2623.753 kb on - strand, within IAI46_12350 at 2623.784 kb on - strand, within IAI46_12350 at 2623.795 kb on + strand, within IAI46_12350 at 2623.908 kb on - strand, within IAI46_12350 at 2624.086 kb on + strand, within IAI46_12350
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,621,363 - -0.9 2,621,466 + +0.2 2,621,642 + +0.5 2,621,667 - +0.7 2,621,786 - -1.9 2,621,811 - +0.9 2,621,822 - -0.6 2,621,846 - +1.5 2,621,881 - -0.2 2,621,906 + +0.2 2,621,906 + +0.5 2,622,000 + -0.3 2,622,043 + +0.7 2,622,043 + +0.7 2,622,057 - -1.1 2,622,059 - +0.5 2,622,215 + -0.5 2,622,240 + -0.7 2,622,248 + +1.1 2,622,373 + +1.5 2,622,455 + IAI46_12345 0.12 -0.5 2,622,487 - IAI46_12345 0.15 +0.8 2,622,540 + IAI46_12345 0.21 -0.7 2,622,580 - IAI46_12345 0.26 +0.7 2,622,733 - IAI46_12345 0.43 +1.4 2,622,735 + IAI46_12345 0.43 +0.6 2,622,736 - IAI46_12345 0.43 -0.4 2,622,767 - IAI46_12345 0.47 -0.5 2,622,767 - IAI46_12345 0.47 -0.5 2,622,791 + IAI46_12345 0.50 -0.5 2,622,972 - IAI46_12345 0.70 +0.3 2,623,045 + IAI46_12345 0.78 -0.1 2,623,239 - +0.3 2,623,331 + +0.3 2,623,659 + IAI46_12350 0.29 -0.8 2,623,660 - IAI46_12350 0.29 +0.9 2,623,752 + IAI46_12350 0.39 -0.2 2,623,753 - IAI46_12350 0.39 -0.2 2,623,784 - IAI46_12350 0.42 +0.9 2,623,795 + IAI46_12350 0.43 +0.7 2,623,908 - IAI46_12350 0.54 -0.3 2,624,086 + IAI46_12350 0.72 +0.0
Or see this region's nucleotide sequence