Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10745 and IAI46_10750 overlap by 2 nucleotides IAI46_10750 and IAI46_10755 overlap by 15 nucleotides IAI46_10755 and IAI46_10760 are separated by 22 nucleotides IAI46_10760 and IAI46_10765 are separated by 5 nucleotides
IAI46_10745: IAI46_10745 - fimbrial biogenesis outer membrane usher protein, at 2,270,775 to 2,273,120
_10745
IAI46_10750: IAI46_10750 - hypothetical protein, at 2,273,119 to 2,273,286
_10750
IAI46_10755: IAI46_10755 - molecular chaperone, at 2,273,272 to 2,274,036
_10755
IAI46_10760: IAI46_10760 - spore coat protein U domain-containing protein, at 2,274,059 to 2,274,607
_10760
IAI46_10765: IAI46_10765 - spore coat protein U domain-containing protein, at 2,274,613 to 2,275,116
_10765
Position (kb)
2273
2274
2275 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2272.360 kb on + strand, within IAI46_10745 at 2272.427 kb on + strand, within IAI46_10745 at 2272.592 kb on - strand, within IAI46_10745 at 2272.592 kb on - strand, within IAI46_10745 at 2272.595 kb on + strand, within IAI46_10745 at 2272.645 kb on + strand, within IAI46_10745 at 2272.645 kb on + strand, within IAI46_10745 at 2272.698 kb on - strand, within IAI46_10745 at 2272.796 kb on - strand, within IAI46_10745 at 2272.951 kb on - strand at 2273.030 kb on - strand at 2273.033 kb on - strand at 2273.033 kb on - strand at 2273.048 kb on - strand at 2273.164 kb on + strand, within IAI46_10750 at 2273.277 kb on - strand at 2273.285 kb on - strand at 2273.390 kb on + strand, within IAI46_10755 at 2273.409 kb on + strand, within IAI46_10755 at 2273.410 kb on - strand, within IAI46_10755 at 2273.442 kb on + strand, within IAI46_10755 at 2273.452 kb on + strand, within IAI46_10755 at 2273.541 kb on - strand, within IAI46_10755 at 2273.819 kb on + strand, within IAI46_10755 at 2273.819 kb on + strand, within IAI46_10755 at 2273.868 kb on + strand, within IAI46_10755 at 2273.868 kb on + strand, within IAI46_10755 at 2273.869 kb on - strand, within IAI46_10755 at 2273.870 kb on + strand, within IAI46_10755 at 2273.870 kb on + strand, within IAI46_10755 at 2273.871 kb on - strand, within IAI46_10755 at 2274.029 kb on - strand at 2274.040 kb on + strand at 2274.057 kb on + strand at 2274.060 kb on + strand at 2274.063 kb on + strand at 2274.063 kb on + strand at 2274.077 kb on + strand at 2274.078 kb on - strand at 2274.078 kb on - strand at 2274.094 kb on - strand at 2274.227 kb on - strand, within IAI46_10760 at 2274.227 kb on - strand, within IAI46_10760 at 2274.298 kb on + strand, within IAI46_10760 at 2274.481 kb on + strand, within IAI46_10760 at 2274.511 kb on + strand, within IAI46_10760 at 2274.601 kb on + strand at 2274.602 kb on - strand at 2274.614 kb on + strand at 2274.689 kb on + strand, within IAI46_10765 at 2274.689 kb on + strand, within IAI46_10765 at 2274.690 kb on - strand, within IAI46_10765 at 2274.774 kb on + strand, within IAI46_10765 at 2274.775 kb on - strand, within IAI46_10765 at 2274.775 kb on - strand, within IAI46_10765 at 2274.777 kb on - strand, within IAI46_10765 at 2274.777 kb on - strand, within IAI46_10765 at 2274.777 kb on - strand, within IAI46_10765 at 2274.786 kb on - strand, within IAI46_10765 at 2274.867 kb on - strand, within IAI46_10765 at 2274.936 kb on + strand, within IAI46_10765 at 2274.955 kb on - strand, within IAI46_10765
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,272,360 + IAI46_10745 0.68 +0.6 2,272,427 + IAI46_10745 0.70 +0.7 2,272,592 - IAI46_10745 0.77 +1.4 2,272,592 - IAI46_10745 0.77 +0.8 2,272,595 + IAI46_10745 0.78 +0.3 2,272,645 + IAI46_10745 0.80 -0.2 2,272,645 + IAI46_10745 0.80 +0.3 2,272,698 - IAI46_10745 0.82 +0.9 2,272,796 - IAI46_10745 0.86 -0.2 2,272,951 - +0.0 2,273,030 - -0.3 2,273,033 - +0.2 2,273,033 - -0.7 2,273,048 - +1.1 2,273,164 + IAI46_10750 0.27 +0.4 2,273,277 - +0.7 2,273,285 - +0.6 2,273,390 + IAI46_10755 0.15 -0.5 2,273,409 + IAI46_10755 0.18 +0.9 2,273,410 - IAI46_10755 0.18 -0.1 2,273,442 + IAI46_10755 0.22 +0.4 2,273,452 + IAI46_10755 0.24 -0.0 2,273,541 - IAI46_10755 0.35 -0.6 2,273,819 + IAI46_10755 0.72 +1.3 2,273,819 + IAI46_10755 0.72 -0.2 2,273,868 + IAI46_10755 0.78 -0.2 2,273,868 + IAI46_10755 0.78 -0.8 2,273,869 - IAI46_10755 0.78 -0.2 2,273,870 + IAI46_10755 0.78 +0.4 2,273,870 + IAI46_10755 0.78 +0.0 2,273,871 - IAI46_10755 0.78 -0.2 2,274,029 - +0.6 2,274,040 + +1.9 2,274,057 + +0.8 2,274,060 + +0.3 2,274,063 + +0.2 2,274,063 + -1.2 2,274,077 + -0.3 2,274,078 - +0.3 2,274,078 - +0.6 2,274,094 - -0.2 2,274,227 - IAI46_10760 0.31 +1.3 2,274,227 - IAI46_10760 0.31 +0.8 2,274,298 + IAI46_10760 0.44 +2.0 2,274,481 + IAI46_10760 0.77 +0.6 2,274,511 + IAI46_10760 0.82 -1.0 2,274,601 + +0.3 2,274,602 - +1.7 2,274,614 + -2.0 2,274,689 + IAI46_10765 0.15 -0.7 2,274,689 + IAI46_10765 0.15 +1.0 2,274,690 - IAI46_10765 0.15 -0.2 2,274,774 + IAI46_10765 0.32 +0.4 2,274,775 - IAI46_10765 0.32 +0.2 2,274,775 - IAI46_10765 0.32 -1.9 2,274,777 - IAI46_10765 0.33 +1.4 2,274,777 - IAI46_10765 0.33 +0.4 2,274,777 - IAI46_10765 0.33 -1.4 2,274,786 - IAI46_10765 0.34 -1.2 2,274,867 - IAI46_10765 0.50 -0.6 2,274,936 + IAI46_10765 0.64 -0.8 2,274,955 - IAI46_10765 0.68 +1.0
Or see this region's nucleotide sequence