Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06685 and IAI46_06690 are separated by 4 nucleotides IAI46_06690 and IAI46_06695 are separated by 14 nucleotides IAI46_06695 and IAI46_06700 are separated by 14 nucleotides IAI46_06700 and IAI46_06705 overlap by 8 nucleotides
IAI46_06685: IAI46_06685 - type 1 fimbrial protein, at 1,423,725 to 1,424,381
_06685
IAI46_06690: IAI46_06690 - fimbrial protein, at 1,424,386 to 1,424,886
_06690
IAI46_06695: IAI46_06695 - fimbrial protein, at 1,424,901 to 1,425,377
_06695
IAI46_06700: IAI46_06700 - fimbrial protein, at 1,425,392 to 1,425,919
_06700
IAI46_06705: IAI46_06705 - transposase, at 1,425,912 to 1,426,493
_06705
Position (kb)
1424
1425
1426 Strain fitness (log2 ratio)
-2
-1
0
1 at 1423.983 kb on - strand, within IAI46_06685 at 1424.024 kb on - strand, within IAI46_06685 at 1424.063 kb on + strand, within IAI46_06685 at 1424.104 kb on + strand, within IAI46_06685 at 1424.104 kb on + strand, within IAI46_06685 at 1424.105 kb on - strand, within IAI46_06685 at 1424.182 kb on + strand, within IAI46_06685 at 1424.182 kb on + strand, within IAI46_06685 at 1424.183 kb on - strand, within IAI46_06685 at 1424.296 kb on - strand, within IAI46_06685 at 1424.303 kb on + strand, within IAI46_06685 at 1424.303 kb on + strand, within IAI46_06685 at 1424.373 kb on + strand at 1424.379 kb on + strand at 1424.380 kb on - strand at 1424.405 kb on + strand at 1424.453 kb on - strand, within IAI46_06690 at 1424.453 kb on - strand, within IAI46_06690 at 1424.484 kb on - strand, within IAI46_06690 at 1424.532 kb on + strand, within IAI46_06690 at 1424.532 kb on + strand, within IAI46_06690 at 1424.590 kb on + strand, within IAI46_06690 at 1424.612 kb on - strand, within IAI46_06690 at 1424.703 kb on + strand, within IAI46_06690 at 1424.776 kb on - strand, within IAI46_06690 at 1424.780 kb on - strand, within IAI46_06690 at 1424.780 kb on - strand, within IAI46_06690 at 1424.879 kb on - strand at 1425.028 kb on + strand, within IAI46_06695 at 1425.028 kb on + strand, within IAI46_06695 at 1425.028 kb on + strand, within IAI46_06695 at 1425.029 kb on - strand, within IAI46_06695 at 1425.029 kb on - strand, within IAI46_06695 at 1425.081 kb on + strand, within IAI46_06695 at 1425.082 kb on - strand, within IAI46_06695 at 1425.082 kb on - strand, within IAI46_06695 at 1425.137 kb on + strand, within IAI46_06695 at 1425.137 kb on + strand, within IAI46_06695 at 1425.137 kb on + strand, within IAI46_06695 at 1425.353 kb on + strand at 1425.369 kb on + strand at 1425.369 kb on + strand at 1425.370 kb on - strand at 1425.370 kb on - strand at 1425.387 kb on + strand at 1425.387 kb on + strand at 1425.388 kb on - strand at 1425.436 kb on - strand at 1425.466 kb on + strand, within IAI46_06700 at 1425.557 kb on - strand, within IAI46_06700 at 1425.557 kb on - strand, within IAI46_06700 at 1425.557 kb on - strand, within IAI46_06700 at 1425.560 kb on + strand, within IAI46_06700 at 1425.560 kb on + strand, within IAI46_06700 at 1425.561 kb on - strand, within IAI46_06700 at 1425.561 kb on - strand, within IAI46_06700 at 1425.566 kb on + strand, within IAI46_06700 at 1425.566 kb on + strand, within IAI46_06700 at 1425.567 kb on - strand, within IAI46_06700 at 1425.567 kb on - strand, within IAI46_06700 at 1425.568 kb on + strand, within IAI46_06700 at 1425.569 kb on - strand, within IAI46_06700 at 1425.569 kb on - strand, within IAI46_06700 at 1425.827 kb on + strand, within IAI46_06700 at 1425.827 kb on + strand, within IAI46_06700 at 1425.827 kb on + strand, within IAI46_06700 at 1425.827 kb on + strand, within IAI46_06700 at 1425.860 kb on - strand, within IAI46_06700 at 1425.860 kb on - strand, within IAI46_06700 at 1425.917 kb on + strand at 1426.038 kb on + strand, within IAI46_06705 at 1426.038 kb on + strand, within IAI46_06705 at 1426.039 kb on - strand, within IAI46_06705 at 1426.039 kb on - strand, within IAI46_06705 at 1426.039 kb on - strand, within IAI46_06705 at 1426.048 kb on + strand, within IAI46_06705 at 1426.048 kb on + strand, within IAI46_06705 at 1426.048 kb on + strand, within IAI46_06705 at 1426.138 kb on + strand, within IAI46_06705 at 1426.138 kb on + strand, within IAI46_06705 at 1426.139 kb on - strand, within IAI46_06705 at 1426.266 kb on + strand, within IAI46_06705 at 1426.267 kb on - strand, within IAI46_06705 at 1426.268 kb on + strand, within IAI46_06705 at 1426.268 kb on + strand, within IAI46_06705 at 1426.269 kb on - strand, within IAI46_06705 at 1426.269 kb on - strand, within IAI46_06705 at 1426.300 kb on - strand, within IAI46_06705 at 1426.317 kb on - strand, within IAI46_06705
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,423,983 - IAI46_06685 0.39 +0.1 1,424,024 - IAI46_06685 0.46 +0.6 1,424,063 + IAI46_06685 0.51 +0.0 1,424,104 + IAI46_06685 0.58 +0.1 1,424,104 + IAI46_06685 0.58 +0.4 1,424,105 - IAI46_06685 0.58 +0.2 1,424,182 + IAI46_06685 0.70 +0.2 1,424,182 + IAI46_06685 0.70 +1.4 1,424,183 - IAI46_06685 0.70 +0.6 1,424,296 - IAI46_06685 0.87 +0.7 1,424,303 + IAI46_06685 0.88 +0.9 1,424,303 + IAI46_06685 0.88 -0.1 1,424,373 + +0.7 1,424,379 + -0.1 1,424,380 - +0.9 1,424,405 + +0.3 1,424,453 - IAI46_06690 0.13 -2.6 1,424,453 - IAI46_06690 0.13 -0.8 1,424,484 - IAI46_06690 0.20 -0.1 1,424,532 + IAI46_06690 0.29 -0.9 1,424,532 + IAI46_06690 0.29 -0.0 1,424,590 + IAI46_06690 0.41 -1.0 1,424,612 - IAI46_06690 0.45 +0.3 1,424,703 + IAI46_06690 0.63 -1.3 1,424,776 - IAI46_06690 0.78 +0.3 1,424,780 - IAI46_06690 0.79 +0.5 1,424,780 - IAI46_06690 0.79 +1.0 1,424,879 - +0.3 1,425,028 + IAI46_06695 0.27 +0.9 1,425,028 + IAI46_06695 0.27 -0.5 1,425,028 + IAI46_06695 0.27 +0.6 1,425,029 - IAI46_06695 0.27 +0.4 1,425,029 - IAI46_06695 0.27 -0.1 1,425,081 + IAI46_06695 0.38 -2.3 1,425,082 - IAI46_06695 0.38 -0.8 1,425,082 - IAI46_06695 0.38 -0.6 1,425,137 + IAI46_06695 0.49 -0.3 1,425,137 + IAI46_06695 0.49 +1.4 1,425,137 + IAI46_06695 0.49 +0.9 1,425,353 + -0.1 1,425,369 + -0.6 1,425,369 + +0.9 1,425,370 - +0.3 1,425,370 - -0.5 1,425,387 + -0.6 1,425,387 + +0.6 1,425,388 - +0.4 1,425,436 - +0.4 1,425,466 + IAI46_06700 0.14 -1.3 1,425,557 - IAI46_06700 0.31 +0.3 1,425,557 - IAI46_06700 0.31 +0.1 1,425,557 - IAI46_06700 0.31 +1.0 1,425,560 + IAI46_06700 0.32 +0.1 1,425,560 + IAI46_06700 0.32 +1.0 1,425,561 - IAI46_06700 0.32 +0.9 1,425,561 - IAI46_06700 0.32 +0.2 1,425,566 + IAI46_06700 0.33 -2.3 1,425,566 + IAI46_06700 0.33 -0.1 1,425,567 - IAI46_06700 0.33 -0.0 1,425,567 - IAI46_06700 0.33 -0.3 1,425,568 + IAI46_06700 0.33 +0.1 1,425,569 - IAI46_06700 0.34 +0.3 1,425,569 - IAI46_06700 0.34 +0.1 1,425,827 + IAI46_06700 0.82 -0.4 1,425,827 + IAI46_06700 0.82 +0.6 1,425,827 + IAI46_06700 0.82 +1.6 1,425,827 + IAI46_06700 0.82 -0.1 1,425,860 - IAI46_06700 0.89 +0.6 1,425,860 - IAI46_06700 0.89 +0.7 1,425,917 + -0.7 1,426,038 + IAI46_06705 0.22 +0.1 1,426,038 + IAI46_06705 0.22 +0.4 1,426,039 - IAI46_06705 0.22 +0.5 1,426,039 - IAI46_06705 0.22 +0.2 1,426,039 - IAI46_06705 0.22 +0.0 1,426,048 + IAI46_06705 0.23 -0.5 1,426,048 + IAI46_06705 0.23 +0.4 1,426,048 + IAI46_06705 0.23 +0.9 1,426,138 + IAI46_06705 0.39 +0.8 1,426,138 + IAI46_06705 0.39 +0.7 1,426,139 - IAI46_06705 0.39 +1.1 1,426,266 + IAI46_06705 0.61 +0.1 1,426,267 - IAI46_06705 0.61 +0.6 1,426,268 + IAI46_06705 0.61 +0.2 1,426,268 + IAI46_06705 0.61 +0.1 1,426,269 - IAI46_06705 0.61 -0.8 1,426,269 - IAI46_06705 0.61 +0.7 1,426,300 - IAI46_06705 0.67 -1.0 1,426,317 - IAI46_06705 0.70 +0.2
Or see this region's nucleotide sequence