Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05650 and IAI46_05655 are separated by 565 nucleotides IAI46_05655 and IAI46_05660 are separated by 137 nucleotides
IAI46_05650: IAI46_05650 - response regulator transcription factor, at 1,220,287 to 1,220,904
_05650
IAI46_05655: IAI46_05655 - AlpA family transcriptional regulator, at 1,221,470 to 1,221,676
_05655
IAI46_05660: IAI46_05660 - inovirus-type Gp2 protein, at 1,221,814 to 1,222,383
_05660
Position (kb)
1221
1222 Strain fitness (log2 ratio)
-1
0
1
2 at 1220.476 kb on - strand, within IAI46_05650 at 1220.502 kb on - strand, within IAI46_05650 at 1220.536 kb on - strand, within IAI46_05650 at 1220.640 kb on - strand, within IAI46_05650 at 1220.686 kb on + strand, within IAI46_05650 at 1220.711 kb on + strand, within IAI46_05650 at 1220.714 kb on + strand, within IAI46_05650 at 1220.715 kb on - strand, within IAI46_05650 at 1220.755 kb on - strand, within IAI46_05650 at 1220.766 kb on + strand, within IAI46_05650 at 1220.767 kb on - strand, within IAI46_05650 at 1220.787 kb on + strand, within IAI46_05650 at 1220.788 kb on - strand, within IAI46_05650 at 1220.811 kb on + strand, within IAI46_05650 at 1220.826 kb on + strand, within IAI46_05650 at 1220.868 kb on + strand at 1220.926 kb on + strand at 1220.967 kb on + strand at 1220.971 kb on + strand at 1220.972 kb on - strand at 1221.173 kb on + strand at 1221.173 kb on + strand at 1221.174 kb on - strand at 1221.191 kb on + strand at 1221.332 kb on + strand at 1221.332 kb on + strand at 1221.332 kb on + strand at 1221.332 kb on + strand at 1221.332 kb on + strand at 1221.333 kb on - strand at 1221.333 kb on - strand at 1221.334 kb on + strand at 1221.334 kb on + strand at 1221.334 kb on + strand at 1221.334 kb on + strand at 1221.335 kb on - strand at 1221.336 kb on + strand at 1221.336 kb on + strand at 1221.336 kb on + strand at 1221.336 kb on + strand at 1221.337 kb on - strand at 1221.337 kb on - strand at 1221.412 kb on - strand at 1221.420 kb on + strand at 1221.420 kb on + strand at 1221.421 kb on - strand at 1221.428 kb on - strand at 1221.485 kb on - strand at 1221.500 kb on + strand, within IAI46_05655 at 1221.511 kb on + strand, within IAI46_05655 at 1221.552 kb on - strand, within IAI46_05655 at 1221.589 kb on - strand, within IAI46_05655 at 1221.599 kb on - strand, within IAI46_05655 at 1221.657 kb on - strand at 1221.663 kb on + strand at 1221.866 kb on + strand at 1221.867 kb on - strand at 1221.883 kb on - strand, within IAI46_05660 at 1221.917 kb on + strand, within IAI46_05660 at 1221.917 kb on + strand, within IAI46_05660 at 1221.918 kb on - strand, within IAI46_05660 at 1221.918 kb on - strand, within IAI46_05660 at 1221.918 kb on - strand, within IAI46_05660 at 1221.918 kb on - strand, within IAI46_05660 at 1221.918 kb on - strand, within IAI46_05660 at 1221.918 kb on - strand, within IAI46_05660 at 1221.940 kb on + strand, within IAI46_05660 at 1221.940 kb on + strand, within IAI46_05660 at 1221.941 kb on - strand, within IAI46_05660 at 1221.958 kb on + strand, within IAI46_05660 at 1221.959 kb on - strand, within IAI46_05660 at 1221.973 kb on + strand, within IAI46_05660 at 1222.011 kb on - strand, within IAI46_05660 at 1222.026 kb on + strand, within IAI46_05660 at 1222.026 kb on + strand, within IAI46_05660 at 1222.027 kb on - strand, within IAI46_05660 at 1222.027 kb on - strand, within IAI46_05660 at 1222.043 kb on + strand, within IAI46_05660 at 1222.048 kb on + strand, within IAI46_05660 at 1222.049 kb on - strand, within IAI46_05660 at 1222.097 kb on + strand, within IAI46_05660 at 1222.097 kb on + strand, within IAI46_05660 at 1222.137 kb on - strand, within IAI46_05660 at 1222.150 kb on + strand, within IAI46_05660 at 1222.192 kb on + strand, within IAI46_05660 at 1222.193 kb on - strand, within IAI46_05660 at 1222.196 kb on + strand, within IAI46_05660 at 1222.196 kb on + strand, within IAI46_05660 at 1222.196 kb on + strand, within IAI46_05660 at 1222.348 kb on - strand at 1222.370 kb on - strand at 1222.405 kb on - strand at 1222.459 kb on - strand at 1222.459 kb on - strand at 1222.488 kb on - strand at 1222.622 kb on - strand at 1222.638 kb on - strand at 1222.638 kb on - strand at 1222.641 kb on - strand at 1222.671 kb on + strand at 1222.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,220,476 - IAI46_05650 0.31 -0.4 1,220,502 - IAI46_05650 0.35 -0.0 1,220,536 - IAI46_05650 0.40 +0.2 1,220,640 - IAI46_05650 0.57 -0.4 1,220,686 + IAI46_05650 0.65 +1.0 1,220,711 + IAI46_05650 0.69 +0.3 1,220,714 + IAI46_05650 0.69 -0.2 1,220,715 - IAI46_05650 0.69 +0.6 1,220,755 - IAI46_05650 0.76 +1.8 1,220,766 + IAI46_05650 0.78 +1.1 1,220,767 - IAI46_05650 0.78 +0.4 1,220,787 + IAI46_05650 0.81 +0.1 1,220,788 - IAI46_05650 0.81 +1.1 1,220,811 + IAI46_05650 0.85 -0.1 1,220,826 + IAI46_05650 0.87 +0.4 1,220,868 + -0.6 1,220,926 + -1.4 1,220,967 + +0.4 1,220,971 + +0.6 1,220,972 - -0.9 1,221,173 + +0.0 1,221,173 + +0.2 1,221,174 - -0.0 1,221,191 + +0.7 1,221,332 + -0.8 1,221,332 + +0.3 1,221,332 + +0.4 1,221,332 + +0.8 1,221,332 + +0.5 1,221,333 - +0.1 1,221,333 - +1.2 1,221,334 + +1.3 1,221,334 + -0.3 1,221,334 + -0.7 1,221,334 + -0.8 1,221,335 - -0.0 1,221,336 + +0.1 1,221,336 + -0.6 1,221,336 + -1.1 1,221,336 + -0.2 1,221,337 - +0.3 1,221,337 - +0.4 1,221,412 - +0.3 1,221,420 + +0.8 1,221,420 + +0.1 1,221,421 - -0.3 1,221,428 - +0.7 1,221,485 - +0.2 1,221,500 + IAI46_05655 0.14 -0.1 1,221,511 + IAI46_05655 0.20 -0.1 1,221,552 - IAI46_05655 0.40 -0.0 1,221,589 - IAI46_05655 0.57 -1.3 1,221,599 - IAI46_05655 0.62 -0.1 1,221,657 - +0.5 1,221,663 + -0.2 1,221,866 + -0.2 1,221,867 - -1.1 1,221,883 - IAI46_05660 0.12 +1.9 1,221,917 + IAI46_05660 0.18 +0.6 1,221,917 + IAI46_05660 0.18 -1.1 1,221,918 - IAI46_05660 0.18 +0.8 1,221,918 - IAI46_05660 0.18 +1.2 1,221,918 - IAI46_05660 0.18 +0.4 1,221,918 - IAI46_05660 0.18 +0.6 1,221,918 - IAI46_05660 0.18 -0.1 1,221,918 - IAI46_05660 0.18 +0.3 1,221,940 + IAI46_05660 0.22 +0.4 1,221,940 + IAI46_05660 0.22 -0.3 1,221,941 - IAI46_05660 0.22 +0.6 1,221,958 + IAI46_05660 0.25 +1.0 1,221,959 - IAI46_05660 0.25 -0.3 1,221,973 + IAI46_05660 0.28 -0.0 1,222,011 - IAI46_05660 0.35 +0.1 1,222,026 + IAI46_05660 0.37 -0.2 1,222,026 + IAI46_05660 0.37 -0.4 1,222,027 - IAI46_05660 0.37 +0.2 1,222,027 - IAI46_05660 0.37 -1.0 1,222,043 + IAI46_05660 0.40 -0.4 1,222,048 + IAI46_05660 0.41 +1.1 1,222,049 - IAI46_05660 0.41 +1.1 1,222,097 + IAI46_05660 0.50 -0.2 1,222,097 + IAI46_05660 0.50 -0.1 1,222,137 - IAI46_05660 0.57 -1.2 1,222,150 + IAI46_05660 0.59 +0.4 1,222,192 + IAI46_05660 0.66 +0.2 1,222,193 - IAI46_05660 0.66 -0.4 1,222,196 + IAI46_05660 0.67 +0.7 1,222,196 + IAI46_05660 0.67 -0.1 1,222,196 + IAI46_05660 0.67 +0.5 1,222,348 - +0.2 1,222,370 - -0.1 1,222,405 - +0.7 1,222,459 - +0.1 1,222,459 - -0.2 1,222,488 - +0.2 1,222,622 - -0.8 1,222,638 - +0.5 1,222,638 - +0.1 1,222,641 - +0.3 1,222,671 + +1.1 1,222,672 - +1.1
Or see this region's nucleotide sequence