Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05525 and IAI46_05530 are separated by 209 nucleotides IAI46_05530 and IAI46_05535 overlap by 4 nucleotides
IAI46_05525: IAI46_05525 - hypothetical protein, at 1,189,704 to 1,190,327
_05525
IAI46_05530: IAI46_05530 - type VI secretion system contractile sheath small subunit, at 1,190,537 to 1,191,025
_05530
IAI46_05535: IAI46_05535 - type VI secretion system contractile sheath large subunit, at 1,191,022 to 1,192,503
_05535
Position (kb)
1190
1191
1192 Strain fitness (log2 ratio)
-1
0
1 at 1189.602 kb on + strand at 1189.602 kb on + strand at 1189.617 kb on - strand at 1189.627 kb on + strand at 1189.627 kb on + strand at 1189.718 kb on + strand at 1189.807 kb on - strand, within IAI46_05525 at 1189.970 kb on - strand, within IAI46_05525 at 1189.970 kb on - strand, within IAI46_05525 at 1190.036 kb on - strand, within IAI46_05525 at 1190.192 kb on + strand, within IAI46_05525 at 1190.229 kb on - strand, within IAI46_05525 at 1190.270 kb on - strand at 1190.468 kb on - strand at 1190.601 kb on + strand, within IAI46_05530 at 1190.601 kb on + strand, within IAI46_05530 at 1190.709 kb on + strand, within IAI46_05530 at 1190.709 kb on + strand, within IAI46_05530 at 1190.735 kb on - strand, within IAI46_05530 at 1190.892 kb on + strand, within IAI46_05530 at 1190.892 kb on + strand, within IAI46_05530 at 1191.138 kb on - strand at 1191.211 kb on - strand, within IAI46_05535 at 1191.215 kb on + strand, within IAI46_05535 at 1191.225 kb on + strand, within IAI46_05535 at 1191.321 kb on + strand, within IAI46_05535 at 1191.434 kb on + strand, within IAI46_05535 at 1191.434 kb on + strand, within IAI46_05535 at 1191.438 kb on + strand, within IAI46_05535 at 1191.448 kb on + strand, within IAI46_05535 at 1191.466 kb on - strand, within IAI46_05535 at 1191.543 kb on - strand, within IAI46_05535 at 1191.658 kb on - strand, within IAI46_05535 at 1191.662 kb on + strand, within IAI46_05535 at 1191.662 kb on + strand, within IAI46_05535 at 1191.822 kb on + strand, within IAI46_05535 at 1191.822 kb on + strand, within IAI46_05535 at 1191.838 kb on + strand, within IAI46_05535 at 1191.838 kb on + strand, within IAI46_05535 at 1191.839 kb on - strand, within IAI46_05535 at 1191.839 kb on - strand, within IAI46_05535 at 1191.926 kb on + strand, within IAI46_05535 at 1191.926 kb on + strand, within IAI46_05535 at 1191.927 kb on - strand, within IAI46_05535 at 1191.927 kb on - strand, within IAI46_05535 at 1191.944 kb on + strand, within IAI46_05535 at 1191.961 kb on + strand, within IAI46_05535 at 1191.962 kb on - strand, within IAI46_05535 at 1191.962 kb on - strand, within IAI46_05535 at 1191.963 kb on + strand, within IAI46_05535 at 1191.964 kb on - strand, within IAI46_05535 at 1191.964 kb on - strand, within IAI46_05535 at 1191.967 kb on + strand, within IAI46_05535 at 1191.968 kb on - strand, within IAI46_05535 at 1191.969 kb on + strand, within IAI46_05535 at 1191.969 kb on + strand, within IAI46_05535
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,189,602 + +0.6 1,189,602 + +0.4 1,189,617 - +0.5 1,189,627 + +1.6 1,189,627 + -0.0 1,189,718 + -1.1 1,189,807 - IAI46_05525 0.17 +1.2 1,189,970 - IAI46_05525 0.43 +0.7 1,189,970 - IAI46_05525 0.43 -0.3 1,190,036 - IAI46_05525 0.53 +0.3 1,190,192 + IAI46_05525 0.78 -0.6 1,190,229 - IAI46_05525 0.84 +1.1 1,190,270 - +0.7 1,190,468 - +0.3 1,190,601 + IAI46_05530 0.13 +0.2 1,190,601 + IAI46_05530 0.13 +0.0 1,190,709 + IAI46_05530 0.35 -1.2 1,190,709 + IAI46_05530 0.35 -0.2 1,190,735 - IAI46_05530 0.40 -0.1 1,190,892 + IAI46_05530 0.73 +0.2 1,190,892 + IAI46_05530 0.73 +0.4 1,191,138 - -0.9 1,191,211 - IAI46_05535 0.13 +0.9 1,191,215 + IAI46_05535 0.13 -1.3 1,191,225 + IAI46_05535 0.14 -0.7 1,191,321 + IAI46_05535 0.20 -0.2 1,191,434 + IAI46_05535 0.28 +0.5 1,191,434 + IAI46_05535 0.28 +0.7 1,191,438 + IAI46_05535 0.28 +1.2 1,191,448 + IAI46_05535 0.29 -0.4 1,191,466 - IAI46_05535 0.30 +0.1 1,191,543 - IAI46_05535 0.35 +0.3 1,191,658 - IAI46_05535 0.43 -0.1 1,191,662 + IAI46_05535 0.43 +0.3 1,191,662 + IAI46_05535 0.43 +0.9 1,191,822 + IAI46_05535 0.54 -1.7 1,191,822 + IAI46_05535 0.54 +0.7 1,191,838 + IAI46_05535 0.55 +0.2 1,191,838 + IAI46_05535 0.55 +0.4 1,191,839 - IAI46_05535 0.55 +0.3 1,191,839 - IAI46_05535 0.55 -0.3 1,191,926 + IAI46_05535 0.61 +0.3 1,191,926 + IAI46_05535 0.61 -1.4 1,191,927 - IAI46_05535 0.61 -0.2 1,191,927 - IAI46_05535 0.61 -0.7 1,191,944 + IAI46_05535 0.62 +0.9 1,191,961 + IAI46_05535 0.63 +1.5 1,191,962 - IAI46_05535 0.63 -0.2 1,191,962 - IAI46_05535 0.63 -0.5 1,191,963 + IAI46_05535 0.63 -0.5 1,191,964 - IAI46_05535 0.64 -0.3 1,191,964 - IAI46_05535 0.64 -0.2 1,191,967 + IAI46_05535 0.64 +0.5 1,191,968 - IAI46_05535 0.64 +1.2 1,191,969 + IAI46_05535 0.64 +0.3 1,191,969 + IAI46_05535 0.64 +0.6
Or see this region's nucleotide sequence