Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04825 and IAI46_04830 are separated by 229 nucleotides IAI46_04830 and IAI46_04835 are separated by 244 nucleotides
IAI46_04825: IAI46_04825 - peroxiredoxin C, at 1,040,019 to 1,040,621
_04825
IAI46_04830: IAI46_04830 - DUF479 domain-containing protein, at 1,040,851 to 1,041,432
_04830
IAI46_04835: IAI46_04835 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 1,041,677 to 1,042,747
_04835
Position (kb)
1040
1041
1042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1039.873 kb on - strand at 1039.873 kb on - strand at 1039.888 kb on + strand at 1039.889 kb on - strand at 1039.889 kb on - strand at 1039.889 kb on - strand at 1039.944 kb on - strand at 1040.047 kb on + strand at 1040.052 kb on - strand at 1040.052 kb on - strand at 1040.052 kb on - strand at 1040.364 kb on - strand, within IAI46_04825 at 1040.476 kb on - strand, within IAI46_04825 at 1040.476 kb on - strand, within IAI46_04825 at 1040.476 kb on - strand, within IAI46_04825 at 1040.476 kb on - strand, within IAI46_04825 at 1040.575 kb on - strand at 1040.611 kb on - strand at 1040.611 kb on - strand at 1040.611 kb on - strand at 1040.622 kb on - strand at 1040.622 kb on - strand at 1040.622 kb on - strand at 1040.626 kb on - strand at 1040.634 kb on - strand at 1040.634 kb on - strand at 1040.637 kb on - strand at 1040.643 kb on + strand at 1040.673 kb on - strand at 1040.674 kb on + strand at 1040.703 kb on - strand at 1040.722 kb on + strand at 1040.750 kb on - strand at 1040.852 kb on + strand at 1040.852 kb on + strand at 1040.891 kb on + strand at 1040.925 kb on - strand, within IAI46_04830 at 1040.925 kb on - strand, within IAI46_04830 at 1040.925 kb on - strand, within IAI46_04830 at 1040.936 kb on - strand, within IAI46_04830 at 1041.009 kb on + strand, within IAI46_04830 at 1041.057 kb on - strand, within IAI46_04830 at 1041.057 kb on - strand, within IAI46_04830 at 1041.194 kb on - strand, within IAI46_04830 at 1041.217 kb on + strand, within IAI46_04830 at 1041.283 kb on + strand, within IAI46_04830 at 1041.307 kb on - strand, within IAI46_04830 at 1041.307 kb on - strand, within IAI46_04830 at 1041.383 kb on - strand at 1041.441 kb on + strand at 1041.442 kb on - strand at 1041.442 kb on - strand at 1041.442 kb on - strand at 1041.443 kb on + strand at 1041.444 kb on - strand at 1041.444 kb on - strand at 1041.444 kb on - strand at 1041.468 kb on + strand at 1041.469 kb on - strand at 1041.497 kb on + strand at 1041.498 kb on - strand at 1041.498 kb on - strand at 1041.502 kb on + strand at 1041.503 kb on - strand at 1041.503 kb on - strand at 1041.503 kb on - strand at 1041.529 kb on + strand at 1041.587 kb on - strand at 1041.595 kb on - strand at 1041.595 kb on - strand at 1041.646 kb on - strand at 1041.650 kb on + strand at 1041.650 kb on + strand at 1041.650 kb on + strand at 1041.650 kb on + strand at 1041.650 kb on + strand at 1041.650 kb on + strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.651 kb on - strand at 1041.653 kb on - strand at 1041.654 kb on + strand at 1041.654 kb on + strand at 1041.654 kb on + strand at 1041.654 kb on + strand at 1041.655 kb on - strand at 1041.655 kb on - strand at 1041.655 kb on - strand at 1041.655 kb on - strand at 1041.672 kb on + strand at 1041.673 kb on - strand at 1041.802 kb on - strand, within IAI46_04835 at 1041.802 kb on - strand, within IAI46_04835 at 1041.979 kb on + strand, within IAI46_04835 at 1041.979 kb on + strand, within IAI46_04835 at 1041.979 kb on + strand, within IAI46_04835 at 1041.980 kb on - strand, within IAI46_04835 at 1042.048 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.131 kb on - strand, within IAI46_04835 at 1042.131 kb on - strand, within IAI46_04835 at 1042.133 kb on - strand, within IAI46_04835 at 1042.169 kb on + strand, within IAI46_04835 at 1042.181 kb on + strand, within IAI46_04835 at 1042.181 kb on + strand, within IAI46_04835 at 1042.182 kb on - strand, within IAI46_04835 at 1042.361 kb on + strand, within IAI46_04835 at 1042.395 kb on + strand, within IAI46_04835 at 1042.396 kb on - strand, within IAI46_04835 at 1042.396 kb on - strand, within IAI46_04835 at 1042.396 kb on - strand, within IAI46_04835 at 1042.405 kb on + strand, within IAI46_04835 at 1042.405 kb on + strand, within IAI46_04835 at 1042.406 kb on - strand, within IAI46_04835
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,039,873 - -0.0 1,039,873 - +0.2 1,039,888 + +0.0 1,039,889 - +0.3 1,039,889 - -1.0 1,039,889 - -1.6 1,039,944 - +0.4 1,040,047 + -0.2 1,040,052 - -0.2 1,040,052 - -0.4 1,040,052 - -0.7 1,040,364 - IAI46_04825 0.57 +0.3 1,040,476 - IAI46_04825 0.76 +0.0 1,040,476 - IAI46_04825 0.76 +0.7 1,040,476 - IAI46_04825 0.76 -1.3 1,040,476 - IAI46_04825 0.76 -0.2 1,040,575 - +0.0 1,040,611 - +0.1 1,040,611 - +0.5 1,040,611 - +0.0 1,040,622 - +1.3 1,040,622 - -0.3 1,040,622 - +0.0 1,040,626 - +0.9 1,040,634 - -0.4 1,040,634 - +1.0 1,040,637 - -0.4 1,040,643 + -1.5 1,040,673 - -0.1 1,040,674 + +0.2 1,040,703 - +0.9 1,040,722 + +1.2 1,040,750 - +0.2 1,040,852 + +0.0 1,040,852 + +0.1 1,040,891 + -1.5 1,040,925 - IAI46_04830 0.13 -0.5 1,040,925 - IAI46_04830 0.13 -0.7 1,040,925 - IAI46_04830 0.13 -0.1 1,040,936 - IAI46_04830 0.15 +0.1 1,041,009 + IAI46_04830 0.27 +0.7 1,041,057 - IAI46_04830 0.35 -0.5 1,041,057 - IAI46_04830 0.35 -0.2 1,041,194 - IAI46_04830 0.59 -1.4 1,041,217 + IAI46_04830 0.63 +0.2 1,041,283 + IAI46_04830 0.74 -0.8 1,041,307 - IAI46_04830 0.78 -0.3 1,041,307 - IAI46_04830 0.78 +0.7 1,041,383 - -0.1 1,041,441 + -0.0 1,041,442 - +0.2 1,041,442 - -0.0 1,041,442 - +0.1 1,041,443 + +0.3 1,041,444 - +0.1 1,041,444 - +0.1 1,041,444 - +0.2 1,041,468 + -0.4 1,041,469 - -1.0 1,041,497 + +0.4 1,041,498 - +1.2 1,041,498 - +0.3 1,041,502 + +0.3 1,041,503 - -0.1 1,041,503 - +0.9 1,041,503 - -0.8 1,041,529 + -0.8 1,041,587 - +0.1 1,041,595 - +0.7 1,041,595 - +0.8 1,041,646 - +0.1 1,041,650 + -0.0 1,041,650 + +0.2 1,041,650 + +0.3 1,041,650 + +0.6 1,041,650 + -0.0 1,041,650 + +1.8 1,041,651 - -0.1 1,041,651 - -0.3 1,041,651 - +0.1 1,041,651 - -0.5 1,041,651 - -0.3 1,041,651 - -1.2 1,041,651 - -0.9 1,041,651 - -1.8 1,041,653 - -0.3 1,041,654 + +0.2 1,041,654 + +0.0 1,041,654 + +0.5 1,041,654 + -0.2 1,041,655 - +1.4 1,041,655 - +0.2 1,041,655 - -0.6 1,041,655 - -0.8 1,041,672 + -0.2 1,041,673 - -0.2 1,041,802 - IAI46_04835 0.12 -1.5 1,041,802 - IAI46_04835 0.12 -0.3 1,041,979 + IAI46_04835 0.28 -0.3 1,041,979 + IAI46_04835 0.28 +0.7 1,041,979 + IAI46_04835 0.28 -0.7 1,041,980 - IAI46_04835 0.28 -0.0 1,042,048 + IAI46_04835 0.35 +0.3 1,042,130 + IAI46_04835 0.42 -0.3 1,042,130 + IAI46_04835 0.42 -0.2 1,042,130 + IAI46_04835 0.42 +0.9 1,042,130 + IAI46_04835 0.42 -0.7 1,042,130 + IAI46_04835 0.42 -0.3 1,042,130 + IAI46_04835 0.42 -2.5 1,042,131 - IAI46_04835 0.42 +0.3 1,042,131 - IAI46_04835 0.42 +0.4 1,042,133 - IAI46_04835 0.43 -0.2 1,042,169 + IAI46_04835 0.46 -0.1 1,042,181 + IAI46_04835 0.47 -0.4 1,042,181 + IAI46_04835 0.47 -0.4 1,042,182 - IAI46_04835 0.47 +0.2 1,042,361 + IAI46_04835 0.64 -0.4 1,042,395 + IAI46_04835 0.67 -0.5 1,042,396 - IAI46_04835 0.67 +1.3 1,042,396 - IAI46_04835 0.67 +0.1 1,042,396 - IAI46_04835 0.67 -0.9 1,042,405 + IAI46_04835 0.68 -0.1 1,042,405 + IAI46_04835 0.68 +0.6 1,042,406 - IAI46_04835 0.68 -0.5
Or see this region's nucleotide sequence