Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1239

Experiment: m.b. Paraquat dichloride 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.05 mg/ml
1,420,353	-		Echvi_1237	0.33	-1.6
1,420,362	-		Echvi_1237	0.36	-0.4
1,420,362	-		Echvi_1237	0.36	-2.4
1,420,428	+		Echvi_1237	0.57	-0.4
1,420,429	-		Echvi_1237	0.57	-2.0
1,420,463	+		Echvi_1237	0.68	+0.5
1,420,486	+		Echvi_1237	0.75	-0.2
1,420,487	-		Echvi_1237	0.75	-0.1
1,420,487	-		Echvi_1237	0.75	-2.5
1,420,494	+		Echvi_1237	0.77	-1.2
1,420,536	-				-0.6
1,420,551	-				-2.0
1,420,560	-				+0.7
1,420,560	-				-2.7
1,420,560	-				-0.4
1,420,560	-				-1.6
1,420,565	-				+0.0
1,420,609	+				-0.9
1,420,662	+				+0.6
1,420,662	+				-1.0
1,420,663	-				-0.1
1,420,663	-				-1.0
1,420,663	-				+0.7
1,420,666	+				-0.3
1,420,666	+				+0.3
1,420,666	+				+0.1
1,420,667	-				+0.2
1,420,668	+				+0.1
1,420,703	+				+0.4
1,420,704	-				+0.1
1,420,706	+				-0.6
1,420,707	-				+0.5
1,420,719	+				+1.6
1,420,723	-		Echvi_1238	0.11	-1.9
1,420,970	+		Echvi_1238	0.53	-0.1
1,420,970	+		Echvi_1238	0.53	+0.2
1,420,970	+		Echvi_1238	0.53	-0.2
1,420,971	-		Echvi_1238	0.53	+0.6
1,420,971	-		Echvi_1238	0.53	-0.6
1,420,984	-		Echvi_1238	0.55	-1.0
1,420,984	-		Echvi_1238	0.55	-0.1
1,421,090	+		Echvi_1238	0.73	-0.5
1,421,091	-		Echvi_1238	0.74	-0.5
1,421,102	+		Echvi_1238	0.75	-0.8
1,421,119	+		Echvi_1238	0.78	-0.2
1,421,119	+		Echvi_1238	0.78	+0.7
1,421,119	+		Echvi_1238	0.78	+0.3
1,421,120	-		Echvi_1238	0.78	-0.8
1,421,120	-		Echvi_1238	0.78	-0.6
1,421,120	-		Echvi_1238	0.78	+0.8
1,421,255	-				+0.4
1,421,257	-				+0.1
1,421,307	+				+0.0
1,421,317	+				-0.1
1,421,318	-				-0.8
1,421,318	-				+0.4
1,421,626	+		Echvi_1239	0.45	-0.5
1,421,685	-		Echvi_1239	0.54	-1.6
1,421,685	-		Echvi_1239	0.54	-1.3
1,421,763	+		Echvi_1239	0.65	-1.2
1,421,884	+		Echvi_1239	0.82	-1.6
1,421,885	-		Echvi_1239	0.82	-1.0
1,421,920	+		Echvi_1239	0.87	+0.7
1,422,016	-				-0.7
1,422,016	-				-0.4
1,422,016	-				-1.3
1,422,016	-				+0.8
1,422,016	-				+1.6
1,422,016	-				-1.4
1,422,020	-				+0.7
1,422,036	+				+0.8
1,422,070	+				-1.1
1,422,071	-				+0.0
1,422,100	+				-1.4
1,422,100	+				-0.2
1,422,105	+				+1.3
1,422,114	+				-0.7
1,422,114	+				+0.3
1,422,115	-				+0.1
1,422,115	-				-0.2
1,422,146	+				-0.6
1,422,146	+				-0.7
1,422,146	+				-0.9
1,422,147	-				+1.6
1,422,147	-				+0.0
1,422,147	-				+0.2
1,422,147	-				-0.5
1,422,147	-				-0.6
1,422,198	-				+0.8
1,422,207	+				+0.0
1,422,208	-				+2.8
1,422,208	-				+0.1
1,422,208	-				-0.9
1,422,253	-				+0.4
1,422,253	-				+0.8
1,422,310	+				+0.3
1,422,312	+				-0.3
1,422,463	+				-0.8
1,422,463	+				+0.2
1,422,463	+				-1.1
1,422,463	+				+0.1
1,422,463	+				-0.0
1,422,463	+				-1.1
1,422,464	-				+0.8
1,422,464	-				+0.4
1,422,478	-				+0.1
1,422,496	+				+0.7
1,422,497	-				+1.0
1,422,527	+				-0.6
1,422,531	+				+0.6
1,422,532	-				-1.0
1,422,532	-				-0.3
1,422,532	-				-1.1
1,422,532	-				+0.3
1,422,532	-				-1.0
1,422,532	-				-0.7
1,422,532	-				-0.1
1,422,538	-				-0.1
1,422,549	-				+0.6
1,422,603	+				+0.2
1,422,616	-				+0.1
1,422,616	-				+0.7
1,422,616	-				+0.5
1,422,664	+		Echvi_1240	0.11	+0.2
1,422,665	-		Echvi_1240	0.11	-0.2
1,422,683	+		Echvi_1240	0.13	-0.4
1,422,798	-		Echvi_1240	0.21	+1.1
1,422,798	-		Echvi_1240	0.21	-0.2
1,422,820	+		Echvi_1240	0.23	-1.0
1,422,821	-		Echvi_1240	0.23	+0.6
1,422,823	-		Echvi_1240	0.23	-0.1
1,422,823	-		Echvi_1240	0.23	-0.0
1,422,876	+		Echvi_1240	0.27	+0.4
1,422,877	-		Echvi_1240	0.27	+1.6
1,422,877	-		Echvi_1240	0.27	+0.6
1,422,877	-		Echvi_1240	0.27	-0.5
1,422,877	-		Echvi_1240	0.27	-2.4
1,422,883	+		Echvi_1240	0.28	-1.3
1,422,947	-		Echvi_1240	0.33	+1.3