Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4144 and EX28DRAFT_4145 are separated by 324 nucleotides EX28DRAFT_4145 and EX28DRAFT_4146 are separated by 88 nucleotides
EX28DRAFT_4144: EX28DRAFT_4144 - Intracellular growth attenuator protein IgaA, at 123,992 to 126,127
_4144
EX28DRAFT_4145: EX28DRAFT_4145 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 126,452 to 127,012
_4145
EX28DRAFT_4146: EX28DRAFT_4146 - penicillin-binding protein, 1A family, at 127,101 to 129,653
_4146
Position (kb) 126
127
128 Strain fitness (log2 ratio) -2
-1
0
1 at 126.142 kb on - strand at 126.142 kb on - strand at 126.142 kb on - strand at 126.142 kb on - strand at 126.142 kb on - strand at 126.142 kb on - strand at 126.162 kb on - strand at 126.169 kb on - strand at 126.178 kb on - strand at 126.215 kb on - strand at 126.215 kb on - strand at 126.215 kb on - strand at 126.217 kb on - strand at 126.355 kb on + strand at 126.356 kb on - strand at 126.365 kb on - strand at 126.365 kb on - strand at 126.365 kb on - strand at 126.438 kb on + strand at 126.439 kb on - strand at 126.518 kb on - strand, within EX28DRAFT_4145 at 126.575 kb on - strand, within EX28DRAFT_4145 at 126.575 kb on - strand, within EX28DRAFT_4145 at 127.192 kb on + strand at 127.208 kb on + strand at 127.245 kb on - strand at 127.397 kb on + strand, within EX28DRAFT_4146 at 127.398 kb on - strand, within EX28DRAFT_4146 at 127.404 kb on + strand, within EX28DRAFT_4146 at 127.404 kb on + strand, within EX28DRAFT_4146 at 127.581 kb on + strand, within EX28DRAFT_4146 at 127.581 kb on + strand, within EX28DRAFT_4146 at 127.581 kb on + strand, within EX28DRAFT_4146 at 127.582 kb on - strand, within EX28DRAFT_4146 at 127.645 kb on + strand, within EX28DRAFT_4146 at 127.645 kb on + strand, within EX28DRAFT_4146 at 127.646 kb on - strand, within EX28DRAFT_4146 at 127.785 kb on - strand, within EX28DRAFT_4146 at 127.886 kb on - strand, within EX28DRAFT_4146
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 126,142 - -1.5 126,142 - -0.1 126,142 - +0.0 126,142 - +0.5 126,142 - +0.6 126,142 - +0.1 126,162 - -0.7 126,169 - +0.5 126,178 - +0.0 126,215 - -0.6 126,215 - +0.1 126,215 - +0.2 126,217 - +1.0 126,355 + +0.4 126,356 - -1.2 126,365 - +0.5 126,365 - -2.1 126,365 - -0.7 126,438 + +0.3 126,439 - +0.1 126,518 - EX28DRAFT_4145 0.12 -1.2 126,575 - EX28DRAFT_4145 0.22 -1.3 126,575 - EX28DRAFT_4145 0.22 +0.8 127,192 + +1.3 127,208 + +1.1 127,245 - +0.3 127,397 + EX28DRAFT_4146 0.12 -1.1 127,398 - EX28DRAFT_4146 0.12 +0.9 127,404 + EX28DRAFT_4146 0.12 +0.3 127,404 + EX28DRAFT_4146 0.12 +0.7 127,581 + EX28DRAFT_4146 0.19 +0.6 127,581 + EX28DRAFT_4146 0.19 +0.4 127,581 + EX28DRAFT_4146 0.19 +0.0 127,582 - EX28DRAFT_4146 0.19 +1.3 127,645 + EX28DRAFT_4146 0.21 -0.1 127,645 + EX28DRAFT_4146 0.21 +0.2 127,646 - EX28DRAFT_4146 0.21 +0.3 127,785 - EX28DRAFT_4146 0.27 -0.9 127,886 - EX28DRAFT_4146 0.31 -0.2
Or see this region's nucleotide sequence