Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0394 and EX28DRAFT_0395 overlap by 1 nucleotides EX28DRAFT_0395 and EX28DRAFT_0396 are separated by 16 nucleotides
EX28DRAFT_0394: EX28DRAFT_0394 - Phosphotransferase System HPr (HPr) Family, at 368,134 to 369,264
_0394
EX28DRAFT_0395: EX28DRAFT_0395 - 1-phosphofructokinase, at 369,264 to 370,202
_0395
EX28DRAFT_0396: EX28DRAFT_0396 - PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component, at 370,219 to 371,904
_0396
Position (kb) 369
370
371 Strain fitness (log2 ratio) -2
-1
0
1 at 368.369 kb on - strand, within EX28DRAFT_0394 at 368.454 kb on - strand, within EX28DRAFT_0394 at 368.810 kb on + strand, within EX28DRAFT_0394 at 369.009 kb on - strand, within EX28DRAFT_0394 at 369.013 kb on - strand, within EX28DRAFT_0394 at 369.287 kb on + strand at 369.458 kb on + strand, within EX28DRAFT_0395 at 370.050 kb on + strand, within EX28DRAFT_0395 at 370.051 kb on - strand, within EX28DRAFT_0395 at 370.082 kb on + strand, within EX28DRAFT_0395 at 370.082 kb on + strand, within EX28DRAFT_0395 at 370.083 kb on - strand, within EX28DRAFT_0395 at 370.088 kb on - strand, within EX28DRAFT_0395 at 370.186 kb on + strand at 370.196 kb on + strand at 370.196 kb on + strand at 370.197 kb on - strand at 370.201 kb on - strand at 370.267 kb on + strand at 370.268 kb on - strand at 370.268 kb on - strand at 370.356 kb on - strand at 370.419 kb on + strand, within EX28DRAFT_0396 at 370.480 kb on + strand, within EX28DRAFT_0396 at 370.480 kb on + strand, within EX28DRAFT_0396 at 370.756 kb on + strand, within EX28DRAFT_0396 at 370.757 kb on - strand, within EX28DRAFT_0396 at 370.757 kb on - strand, within EX28DRAFT_0396 at 370.761 kb on + strand, within EX28DRAFT_0396 at 370.762 kb on - strand, within EX28DRAFT_0396 at 370.762 kb on - strand, within EX28DRAFT_0396 at 370.869 kb on + strand, within EX28DRAFT_0396 at 370.919 kb on - strand, within EX28DRAFT_0396 at 370.953 kb on + strand, within EX28DRAFT_0396 at 370.953 kb on + strand, within EX28DRAFT_0396 at 370.954 kb on - strand, within EX28DRAFT_0396 at 370.980 kb on + strand, within EX28DRAFT_0396 at 371.172 kb on + strand, within EX28DRAFT_0396
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 368,369 - EX28DRAFT_0394 0.21 +0.0 368,454 - EX28DRAFT_0394 0.28 -1.5 368,810 + EX28DRAFT_0394 0.60 +0.5 369,009 - EX28DRAFT_0394 0.77 +1.5 369,013 - EX28DRAFT_0394 0.78 +0.4 369,287 + -0.4 369,458 + EX28DRAFT_0395 0.21 -1.3 370,050 + EX28DRAFT_0395 0.84 -2.3 370,051 - EX28DRAFT_0395 0.84 -1.1 370,082 + EX28DRAFT_0395 0.87 -1.1 370,082 + EX28DRAFT_0395 0.87 -0.4 370,083 - EX28DRAFT_0395 0.87 -0.7 370,088 - EX28DRAFT_0395 0.88 +1.2 370,186 + -0.3 370,196 + +1.2 370,196 + +0.2 370,197 - +0.5 370,201 - -1.5 370,267 + +0.7 370,268 - +1.2 370,268 - +0.3 370,356 - +0.3 370,419 + EX28DRAFT_0396 0.12 +0.2 370,480 + EX28DRAFT_0396 0.15 +0.6 370,480 + EX28DRAFT_0396 0.15 +0.4 370,756 + EX28DRAFT_0396 0.32 +0.3 370,757 - EX28DRAFT_0396 0.32 -0.2 370,757 - EX28DRAFT_0396 0.32 -0.2 370,761 + EX28DRAFT_0396 0.32 -0.8 370,762 - EX28DRAFT_0396 0.32 -0.4 370,762 - EX28DRAFT_0396 0.32 -1.2 370,869 + EX28DRAFT_0396 0.39 +0.5 370,919 - EX28DRAFT_0396 0.42 +0.4 370,953 + EX28DRAFT_0396 0.44 -0.3 370,953 + EX28DRAFT_0396 0.44 -0.2 370,954 - EX28DRAFT_0396 0.44 +1.0 370,980 + EX28DRAFT_0396 0.45 +0.0 371,172 + EX28DRAFT_0396 0.57 -1.1
Or see this region's nucleotide sequence