Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03841

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
4,006,867	+		CCNA_03840	0.40	+0.0
4,006,894	-		CCNA_03840	0.42	-0.7
4,006,915	+		CCNA_03840	0.43	-1.2
4,006,915	+		CCNA_03840	0.43	+0.8
4,006,923	-		CCNA_03840	0.43	-0.3
4,006,925	+		CCNA_03840	0.44	-0.3
4,006,925	+		CCNA_03840	0.44	-0.0
4,006,933	-		CCNA_03840	0.44	+0.6
4,006,933	-		CCNA_03840	0.44	-1.4
4,006,933	-		CCNA_03840	0.44	-1.0
4,006,968	-		CCNA_03840	0.46	-0.2
4,006,983	+		CCNA_03840	0.47	-2.4
4,007,092	-		CCNA_03840	0.54	+0.5
4,007,098	+		CCNA_03840	0.55	-0.1
4,007,098	+		CCNA_03840	0.55	-1.2
4,007,108	+		CCNA_03840	0.55	-0.6
4,007,162	-		CCNA_03840	0.59	+0.9
4,007,185	-		CCNA_03840	0.60	+0.7
4,007,269	-		CCNA_03840	0.66	-0.6
4,007,290	+		CCNA_03840	0.67	-1.8
4,007,320	+		CCNA_03840	0.69	-0.4
4,007,322	-		CCNA_03840	0.69	-0.7
4,007,357	+		CCNA_03840	0.72	-0.3
4,007,364	-		CCNA_03840	0.72	+1.5
4,007,369	-		CCNA_03840	0.72	-0.1
4,007,371	+		CCNA_03840	0.72	+2.6
4,007,374	-		CCNA_03840	0.73	-0.5
4,007,385	-		CCNA_03840	0.73	-1.7
4,007,394	+		CCNA_03840	0.74	-1.2
4,007,482	+		CCNA_03840	0.80	-0.3
4,007,490	-		CCNA_03840	0.80	+1.3
4,007,515	+		CCNA_03840	0.82	+0.5
4,007,515	+		CCNA_03840	0.82	+0.3
4,007,520	+		CCNA_03840	0.82	-0.6
4,007,523	-		CCNA_03840	0.82	-0.9
4,007,523	-		CCNA_03840	0.82	-0.4
4,007,535	-		CCNA_03840	0.83	-0.4
4,007,537	+		CCNA_03840	0.83	-0.6
4,007,573	+		CCNA_03840	0.86	+0.3
4,007,573	+		CCNA_03840	0.86	-2.8
4,007,573	+		CCNA_03840	0.86	+0.4
4,007,581	-		CCNA_03840	0.86	-0.1
4,007,581	-		CCNA_03840	0.86	-0.1
4,007,581	-		CCNA_03840	0.86	-0.3
4,007,581	-		CCNA_03840	0.86	+0.2
4,007,581	-		CCNA_03840	0.86	-0.3
4,007,581	-		CCNA_03840	0.86	+0.4
4,007,616	+		CCNA_03840	0.88	-0.7
4,007,624	-		CCNA_03840	0.89	-0.1
4,007,635	+		CCNA_03840	0.90	-0.8
4,007,635	+		CCNA_03840	0.90	-0.7
4,007,635	+		CCNA_03840	0.90	+0.1
4,007,635	+		CCNA_03840	0.90	-0.1
4,007,648	-				+1.4
4,007,654	+				+1.6
4,007,672	-				-0.2
4,007,681	+				-0.8
4,007,681	+				+0.8
4,007,681	+				+0.4
4,007,681	+				+0.7
4,007,681	+				-1.9
4,007,689	-				+0.5
4,007,689	-				-0.2
4,007,689	-				-0.8
4,007,694	-				+0.2
4,007,730	-				+0.3
4,007,747	-				+0.4
4,007,760	+				+1.0
4,007,760	+				+1.9
4,007,777	-				-0.2
4,007,787	+				-1.2
4,007,805	-				-0.2
4,007,823	-				+0.1
4,007,825	+				+0.3
4,007,857	-				-0.5
4,007,875	+				-0.7
4,007,888	+				-0.6
4,007,938	-				-0.3
4,007,943	+		CCNA_03841	0.10	-0.2
4,007,943	+		CCNA_03841	0.10	-0.7
4,007,943	-		CCNA_03841	0.10	+0.3
4,007,951	-		CCNA_03841	0.11	+0.4
4,007,976	-		CCNA_03841	0.13	-1.3
4,008,024	+		CCNA_03841	0.18	-0.7
4,008,027	-		CCNA_03841	0.19	-0.7
4,008,095	-		CCNA_03841	0.26	-0.3
4,008,104	-		CCNA_03841	0.27	-0.3
4,008,129	+		CCNA_03841	0.29	-0.6
4,008,131	+		CCNA_03841	0.30	+0.1
4,008,139	-		CCNA_03841	0.30	-0.8
4,008,139	-		CCNA_03841	0.30	+1.6
4,008,152	+		CCNA_03841	0.32	+2.2
4,008,160	-		CCNA_03841	0.33	-0.4
4,008,168	+		CCNA_03841	0.33	-1.0
4,008,168	+		CCNA_03841	0.33	-0.2
4,008,176	-		CCNA_03841	0.34	-1.3
4,008,181	-		CCNA_03841	0.35	-2.4
4,008,185	-		CCNA_03841	0.35	-1.3
4,008,194	+		CCNA_03841	0.36	+0.0
4,008,196	-		CCNA_03841	0.36	-1.4
4,008,197	-		CCNA_03841	0.36	-0.2
4,008,199	+		CCNA_03841	0.37	-0.8
4,008,213	-		CCNA_03841	0.38	+0.6
4,008,228	+		CCNA_03841	0.40	-1.6
4,008,228	+		CCNA_03841	0.40	-0.2
4,008,228	+		CCNA_03841	0.40	-0.4
4,008,228	+		CCNA_03841	0.40	+0.0
4,008,236	-		CCNA_03841	0.41	-0.2
4,008,236	-		CCNA_03841	0.41	-1.1
4,008,260	+		CCNA_03841	0.43	-0.4
4,008,270	+		CCNA_03841	0.44	+0.0
4,008,277	+		CCNA_03841	0.45	-0.2
4,008,278	-		CCNA_03841	0.45	-0.5
4,008,278	-		CCNA_03841	0.45	-0.5
4,008,278	-		CCNA_03841	0.45	+0.5
4,008,278	-		CCNA_03841	0.45	+0.5
4,008,310	+		CCNA_03841	0.48	-0.5
4,008,310	+		CCNA_03841	0.48	-0.2
4,008,315	+		CCNA_03841	0.49	-1.1
4,008,315	+		CCNA_03841	0.49	-0.2
4,008,320	+		CCNA_03841	0.49	-0.7
4,008,320	+		CCNA_03841	0.49	-0.2
4,008,323	-		CCNA_03841	0.50	+0.2
4,008,327	+		CCNA_03841	0.50	-0.4
4,008,335	-		CCNA_03841	0.51	-0.6
4,008,335	-		CCNA_03841	0.51	-0.7
4,008,360	+		CCNA_03841	0.53	-0.2
4,008,360	+		CCNA_03841	0.53	+0.8
4,008,360	+		CCNA_03841	0.53	-0.7
4,008,361	+		CCNA_03841	0.54	-0.0
4,008,361	+		CCNA_03841	0.54	-0.4
4,008,361	+		CCNA_03841	0.54	+1.6
4,008,368	+		CCNA_03841	0.54	-0.4
4,008,368	-		CCNA_03841	0.54	+0.4
4,008,368	-		CCNA_03841	0.54	+0.4
4,008,369	-		CCNA_03841	0.54	+0.1
4,008,369	-		CCNA_03841	0.54	-0.1
4,008,369	-		CCNA_03841	0.54	-0.3
4,008,398	+		CCNA_03841	0.57	+0.1
4,008,406	-		CCNA_03841	0.58	-0.3
4,008,408	+		CCNA_03841	0.58	+0.0
4,008,411	-		CCNA_03841	0.59	-0.4
4,008,413	+		CCNA_03841	0.59	-0.6
4,008,416	-		CCNA_03841	0.59	+0.0
4,008,416	-		CCNA_03841	0.59	+1.4
4,008,441	-		CCNA_03841	0.62	+0.1
4,008,448	-		CCNA_03841	0.63	-0.7
4,008,453	+		CCNA_03841	0.63	+0.5
4,008,454	+		CCNA_03841	0.63	-0.2
4,008,499	+		CCNA_03841	0.68	+0.3
4,008,509	+		CCNA_03841	0.69	+0.2
4,008,532	+		CCNA_03841	0.71	-0.4
4,008,532	+		CCNA_03841	0.71	+0.1
4,008,532	+		CCNA_03841	0.71	+0.0
4,008,532	+		CCNA_03841	0.71	-1.4
4,008,532	+		CCNA_03841	0.71	-0.5
4,008,532	+		CCNA_03841	0.71	+0.4
4,008,532	+		CCNA_03841	0.71	-1.0
4,008,540	-		CCNA_03841	0.72	+0.9
4,008,540	-		CCNA_03841	0.72	-0.1
4,008,540	-		CCNA_03841	0.72	+0.1
4,008,540	-		CCNA_03841	0.72	-0.2
4,008,550	+		CCNA_03841	0.73	+1.6
4,008,558	-		CCNA_03841	0.74	-0.1
4,008,558	-		CCNA_03841	0.74	+0.2
4,008,558	-		CCNA_03841	0.74	-0.2
4,008,558	-		CCNA_03841	0.74	+0.1
4,008,559	+		CCNA_03841	0.74	-1.0
4,008,567	-		CCNA_03841	0.75	-0.6
4,008,572	-		CCNA_03841	0.76	+0.8
4,008,578	-		CCNA_03841	0.76	+0.0
4,008,578	-		CCNA_03841	0.76	-0.3
4,008,593	+		CCNA_03841	0.78	+0.4
4,008,594	-		CCNA_03841	0.78	+0.7
4,008,594	-		CCNA_03841	0.78	-0.7
4,008,620	+		CCNA_03841	0.81	-0.2
4,008,620	+		CCNA_03841	0.81	-1.9
4,008,620	+		CCNA_03841	0.81	-0.9
4,008,620	+		CCNA_03841	0.81	-0.7
4,008,620	+		CCNA_03841	0.81	-1.0
4,008,620	+		CCNA_03841	0.81	-0.8
4,008,620	+		CCNA_03841	0.81	-0.2
4,008,628	-		CCNA_03841	0.81	+0.5
4,008,628	-		CCNA_03841	0.81	-0.5
4,008,628	-		CCNA_03841	0.81	-0.2
4,008,628	-		CCNA_03841	0.81	-0.0
4,008,634	-		CCNA_03841	0.82	-1.3
4,008,649	-		CCNA_03841	0.84	+0.3
4,008,657	-		CCNA_03841	0.84	+0.1
4,008,672	+		CCNA_03841	0.86	+0.5
4,008,709	-		CCNA_03841	0.90	+1.0
4,008,716	+				+1.0
4,008,716	+				-0.6
4,008,726	+				+0.4
4,008,731	+				-0.5
4,008,734	-				+0.3
4,008,745	+				-1.5
4,008,753	-				+0.1
4,008,767	+				+1.6
4,008,776	-				+0.4
4,008,793	-				-0.3
4,008,844	+				-0.4
4,008,868	-				-0.3
4,009,602	+				+0.3
4,009,621	-				+0.4
4,009,637	+				+0.2
4,009,640	+				+0.5
4,009,735	+		CCNA_03843	0.22	+0.1
4,009,735	+		CCNA_03843	0.22	+0.2
4,009,743	-		CCNA_03843	0.23	-0.1
4,009,778	+		CCNA_03843	0.29	+0.4
4,009,778	-		CCNA_03843	0.29	+0.2
4,009,778	-		CCNA_03843	0.29	-0.1
4,009,787	-		CCNA_03843	0.30	+0.2
4,009,805	+		CCNA_03843	0.33	+0.7