Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03695

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,860,125	+				-0.1
3,860,125	+				+0.3
3,860,125	-				+0.3
3,860,133	-				+0.2
3,860,185	-		CCNA_03694	0.15	-0.2
3,860,189	+		CCNA_03694	0.16	-0.0
3,860,190	-		CCNA_03694	0.16	+0.1
3,860,210	+		CCNA_03694	0.18	-0.3
3,860,210	+		CCNA_03694	0.18	+0.6
3,860,232	+		CCNA_03694	0.20	+0.5
3,860,255	+		CCNA_03694	0.23	+0.3
3,860,255	+		CCNA_03694	0.23	+0.1
3,860,255	+		CCNA_03694	0.23	+0.1
3,860,263	-		CCNA_03694	0.24	+0.3
3,860,263	-		CCNA_03694	0.24	-0.0
3,860,263	-		CCNA_03694	0.24	+0.2
3,860,359	+		CCNA_03694	0.34	-0.2
3,860,367	-		CCNA_03694	0.35	-0.2
3,860,375	-		CCNA_03694	0.35	-0.0
3,860,382	+		CCNA_03694	0.36	-0.4
3,860,392	+		CCNA_03694	0.37	+0.3
3,860,419	+		CCNA_03694	0.40	+0.3
3,860,419	+		CCNA_03694	0.40	-0.2
3,860,482	+		CCNA_03694	0.47	-0.3
3,860,482	+		CCNA_03694	0.47	+0.2
3,860,487	+		CCNA_03694	0.47	+0.0
3,860,487	+		CCNA_03694	0.47	-0.0
3,860,490	-		CCNA_03694	0.48	-0.5
3,860,490	-		CCNA_03694	0.48	+0.8
3,860,490	-		CCNA_03694	0.48	+0.1
3,860,490	-		CCNA_03694	0.48	-0.2
3,860,492	+		CCNA_03694	0.48	-0.2
3,860,492	+		CCNA_03694	0.48	+0.4
3,860,492	+		CCNA_03694	0.48	-0.4
3,860,500	-		CCNA_03694	0.49	+0.1
3,860,500	-		CCNA_03694	0.49	-0.0
3,860,500	-		CCNA_03694	0.49	+0.1
3,860,500	-		CCNA_03694	0.49	-0.1
3,860,500	-		CCNA_03694	0.49	+0.2
3,860,500	-		CCNA_03694	0.49	-0.5
3,860,554	-		CCNA_03694	0.54	+0.1
3,860,568	+		CCNA_03694	0.56	+0.3
3,860,568	+		CCNA_03694	0.56	+0.9
3,860,568	+		CCNA_03694	0.56	-2.1
3,860,568	+		CCNA_03694	0.56	+0.6
3,860,568	+		CCNA_03694	0.56	+1.4
3,860,576	-		CCNA_03694	0.57	-0.1
3,860,576	-		CCNA_03694	0.57	+1.1
3,860,578	+		CCNA_03694	0.57	+0.1
3,860,585	-		CCNA_03694	0.58	+0.7
3,860,623	+		CCNA_03694	0.62	-2.9
3,860,623	+		CCNA_03694	0.62	-0.1
3,860,631	-		CCNA_03694	0.63	-1.2
3,860,631	-		CCNA_03694	0.63	+0.8
3,860,648	+		CCNA_03694	0.64	+0.2
3,860,746	+		CCNA_03694	0.75	+0.1
3,860,770	+		CCNA_03694	0.77	+0.2
3,860,778	-		CCNA_03694	0.78	-0.3
3,860,789	-		CCNA_03694	0.79	-0.6
3,860,807	+		CCNA_03694	0.81	+0.2
3,860,815	-		CCNA_03694	0.82	+0.1
3,860,838	-		CCNA_03694	0.84	-1.5
3,860,916	-				-0.5
3,860,928	+				-0.0
3,860,928	+				+0.2
3,860,928	+				+0.5
3,860,936	-				+0.1
3,860,944	-				-0.1
3,860,988	+				-0.6
3,861,003	-				-0.2
3,861,003	-				-0.5
3,861,037	-				+1.4
3,861,056	-				+1.6
3,861,083	+				+0.4
3,861,139	+				-0.2
3,861,246	-				-0.9
3,861,352	+		CCNA_03695	0.17	-0.5
3,861,379	-		CCNA_03695	0.18	-0.6
3,861,386	+		CCNA_03695	0.19	-0.3
3,861,386	+		CCNA_03695	0.19	-0.9
3,861,386	+		CCNA_03695	0.19	-0.4
3,861,386	+		CCNA_03695	0.19	+0.0
3,861,386	+		CCNA_03695	0.19	-0.5
3,861,386	+		CCNA_03695	0.19	+0.4
3,861,386	+		CCNA_03695	0.19	+1.1
3,861,394	-		CCNA_03695	0.19	+0.1
3,861,394	-		CCNA_03695	0.19	+0.2
3,861,394	-		CCNA_03695	0.19	-0.2
3,861,394	-		CCNA_03695	0.19	+0.1
3,861,398	+		CCNA_03695	0.20	+0.4
3,861,406	-		CCNA_03695	0.20	-0.2
3,861,406	-		CCNA_03695	0.20	-0.5
3,861,406	-		CCNA_03695	0.20	-0.2
3,861,428	+		CCNA_03695	0.22	-1.0
3,861,437	-		CCNA_03695	0.22	-0.0
3,861,439	+		CCNA_03695	0.22	-0.0
3,861,460	-		CCNA_03695	0.24	+0.6
3,861,526	+		CCNA_03695	0.28	-0.0
3,861,547	-		CCNA_03695	0.30	-0.4
3,861,607	+		CCNA_03695	0.33	+0.3
3,861,609	-		CCNA_03695	0.34	-0.5
3,861,609	-		CCNA_03695	0.34	-1.1
3,861,609	-		CCNA_03695	0.34	-1.8
3,861,612	+		CCNA_03695	0.34	-0.6
3,861,612	+		CCNA_03695	0.34	+0.5
3,861,655	+		CCNA_03695	0.37	+0.5
3,861,656	-		CCNA_03695	0.37	+0.1
3,861,663	-		CCNA_03695	0.37	-1.2
3,861,673	+		CCNA_03695	0.38	-0.1
3,861,694	-		CCNA_03695	0.39	-0.4
3,861,741	-		CCNA_03695	0.42	-0.3
3,861,756	+		CCNA_03695	0.43	+0.0
3,861,764	-		CCNA_03695	0.44	-1.2
3,861,788	-		CCNA_03695	0.45	+0.1
3,861,788	-		CCNA_03695	0.45	-1.9
3,861,838	+		CCNA_03695	0.49	+0.1
3,861,857	-		CCNA_03695	0.50	-0.4
3,861,862	-		CCNA_03695	0.50	+0.3
3,861,862	-		CCNA_03695	0.50	+0.9
3,861,876	+		CCNA_03695	0.51	+0.6
3,861,876	+		CCNA_03695	0.51	-0.2
3,861,876	+		CCNA_03695	0.51	-0.1
3,861,876	+		CCNA_03695	0.51	+0.7
3,861,883	-		CCNA_03695	0.52	-0.5
3,861,884	-		CCNA_03695	0.52	+0.5
3,861,884	-		CCNA_03695	0.52	-0.2
3,861,946	+		CCNA_03695	0.56	-1.5
3,861,953	+		CCNA_03695	0.56	+0.6
3,861,953	+		CCNA_03695	0.56	-0.1
3,861,953	+		CCNA_03695	0.56	-0.0
3,861,961	-		CCNA_03695	0.57	-0.3
3,861,961	-		CCNA_03695	0.57	+0.8
3,861,963	+		CCNA_03695	0.57	-0.1
3,861,985	-		CCNA_03695	0.58	-0.2
3,861,986	-		CCNA_03695	0.58	+0.9
3,861,986	-		CCNA_03695	0.58	-0.5
3,861,990	-		CCNA_03695	0.59	+0.9
3,861,990	-		CCNA_03695	0.59	+0.9
3,861,994	+		CCNA_03695	0.59	+0.3
3,861,995	+		CCNA_03695	0.59	-0.3
3,861,995	+		CCNA_03695	0.59	-0.9
3,861,997	-		CCNA_03695	0.59	-1.3
3,862,004	+		CCNA_03695	0.60	-0.0
3,862,007	-		CCNA_03695	0.60	-1.0
3,862,012	-		CCNA_03695	0.60	+0.5
3,862,045	+		CCNA_03695	0.62	-0.4
3,862,045	+		CCNA_03695	0.62	-0.5
3,862,059	+		CCNA_03695	0.63	+0.1
3,862,067	-		CCNA_03695	0.64	-0.4
3,862,067	-		CCNA_03695	0.64	+0.5
3,862,069	+		CCNA_03695	0.64	-0.4
3,862,077	-		CCNA_03695	0.64	-0.4
3,862,082	+		CCNA_03695	0.65	-0.5
3,862,082	+		CCNA_03695	0.65	-0.2
3,862,082	+		CCNA_03695	0.65	+0.0
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	+0.4
3,862,082	+		CCNA_03695	0.65	+1.1
3,862,082	+		CCNA_03695	0.65	+0.4
3,862,082	+		CCNA_03695	0.65	-0.5
3,862,082	+		CCNA_03695	0.65	-1.3
3,862,082	+		CCNA_03695	0.65	-0.8
3,862,082	+		CCNA_03695	0.65	-0.3
3,862,082	+		CCNA_03695	0.65	-2.1
3,862,082	+		CCNA_03695	0.65	+0.5
3,862,082	+		CCNA_03695	0.65	+0.3
3,862,082	+		CCNA_03695	0.65	-0.2
3,862,082	+		CCNA_03695	0.65	-0.2
3,862,082	+		CCNA_03695	0.65	-0.8
3,862,082	+		CCNA_03695	0.65	-0.8
3,862,090	-		CCNA_03695	0.65	+0.2
3,862,090	-		CCNA_03695	0.65	-0.5
3,862,090	-		CCNA_03695	0.65	-1.5
3,862,090	-		CCNA_03695	0.65	+0.8
3,862,090	-		CCNA_03695	0.65	-0.7
3,862,090	-		CCNA_03695	0.65	+0.4
3,862,090	-		CCNA_03695	0.65	-0.3
3,862,090	-		CCNA_03695	0.65	-1.2
3,862,090	-		CCNA_03695	0.65	+0.1
3,862,090	-		CCNA_03695	0.65	+1.3
3,862,119	+		CCNA_03695	0.67	-1.8
3,862,203	-		CCNA_03695	0.73	+0.6
3,862,208	-		CCNA_03695	0.73	+0.6
3,862,210	+		CCNA_03695	0.73	+0.5
3,862,311	+		CCNA_03695	0.80	-0.1
3,862,339	-		CCNA_03695	0.82	+0.6
3,862,341	-		CCNA_03695	0.82	-2.8
3,862,349	-		CCNA_03695	0.82	-1.5
3,862,352	+		CCNA_03695	0.82	+0.2
3,862,352	+		CCNA_03695	0.82	-0.3
3,862,360	-		CCNA_03695	0.83	-0.7
3,862,360	-		CCNA_03695	0.83	-0.0
3,862,376	+		CCNA_03695	0.84	+0.1
3,862,376	+		CCNA_03695	0.84	-0.4
3,862,391	-		CCNA_03695	0.85	+1.3
3,862,456	+		CCNA_03695	0.89	+0.2
3,862,456	+		CCNA_03695	0.89	+0.0
3,862,456	+		CCNA_03695	0.89	+0.4
3,862,464	-		CCNA_03695	0.90	-0.2
3,862,464	-		CCNA_03695	0.90	-0.6
3,862,504	-				-0.7
3,862,506	+				+0.5
3,862,557	+				+0.3
3,862,565	-				+1.2
3,862,593	+				-0.7
3,862,612	+				-0.0
3,862,617	+				+0.3
3,862,620	-				-1.0
3,862,620	-				+1.1
3,862,620	-				+0.1
3,862,625	-				-0.6
3,862,625	-				+0.0
3,862,661	+				+0.7
3,862,690	+				+1.4
3,862,690	+				-0.6
3,862,698	-				+0.6
3,862,704	-				+0.8
3,862,724	-				-0.7
3,862,724	-				-1.8
3,862,738	-				-0.3
3,862,812	+				+0.6
3,862,820	-				-0.4
3,862,823	+				-0.0
3,862,835	+				-1.4
3,862,884	+				-0.1
3,862,903	-				-1.9
3,862,903	-				-0.6
3,862,907	+				+0.1
3,862,936	+		CCNA_03696	0.11	-0.3
3,863,013	+		CCNA_03696	0.15	-0.3
3,863,021	-		CCNA_03696	0.15	+0.0
3,863,021	-		CCNA_03696	0.15	-0.3
3,863,052	-		CCNA_03696	0.17	-0.2
3,863,057	+		CCNA_03696	0.17	+0.2
3,863,081	+		CCNA_03696	0.18	+0.4
3,863,089	-		CCNA_03696	0.18	-0.1
3,863,116	+		CCNA_03696	0.20	+0.5
3,863,123	-		CCNA_03696	0.20	-0.1
3,863,169	+		CCNA_03696	0.23	-0.2
3,863,181	-		CCNA_03696	0.23	-0.0
3,863,195	+		CCNA_03696	0.24	+0.5
3,863,250	-		CCNA_03696	0.27	-1.5
3,863,256	+		CCNA_03696	0.27	+0.4
3,863,264	-		CCNA_03696	0.27	-1.3
3,863,264	-		CCNA_03696	0.27	-0.7
3,863,268	+		CCNA_03696	0.28	-0.3
3,863,276	+		CCNA_03696	0.28	+0.9
3,863,346	+		CCNA_03696	0.32	+0.1
3,863,346	+		CCNA_03696	0.32	-0.9
3,863,354	+		CCNA_03696	0.32	-0.3
3,863,359	+		CCNA_03696	0.32	-0.2
3,863,367	-		CCNA_03696	0.33	-0.7
3,863,367	-		CCNA_03696	0.33	+0.9
3,863,398	+		CCNA_03696	0.34	+1.5
3,863,437	+		CCNA_03696	0.36	-0.2
3,863,510	+		CCNA_03696	0.40	+0.8
3,863,518	-		CCNA_03696	0.40	-0.2
3,863,537	+		CCNA_03696	0.41	+0.1
3,863,537	+		CCNA_03696	0.41	+0.3
3,863,537	+		CCNA_03696	0.41	-0.2
3,863,537	+		CCNA_03696	0.41	+0.2
3,863,537	+		CCNA_03696	0.41	+0.1
3,863,537	+		CCNA_03696	0.41	+0.5
3,863,537	+		CCNA_03696	0.41	-1.4
3,863,537	+		CCNA_03696	0.41	+0.4
3,863,537	+		CCNA_03696	0.41	+0.1
3,863,537	+		CCNA_03696	0.41	-0.5
3,863,544	+		CCNA_03696	0.42	+0.2
3,863,545	-		CCNA_03696	0.42	-0.7
3,863,545	-		CCNA_03696	0.42	+0.1
3,863,545	-		CCNA_03696	0.42	-0.0
3,863,545	-		CCNA_03696	0.42	-0.1
3,863,545	-		CCNA_03696	0.42	-1.5
3,863,545	-		CCNA_03696	0.42	+0.3
3,863,545	-		CCNA_03696	0.42	-0.5
3,863,545	-		CCNA_03696	0.42	-1.0
3,863,545	-		CCNA_03696	0.42	-0.8
3,863,545	-		CCNA_03696	0.42	+1.0
3,863,545	-		CCNA_03696	0.42	+1.2
3,863,545	-		CCNA_03696	0.42	-1.8
3,863,545	-		CCNA_03696	0.42	-0.6
3,863,545	-		CCNA_03696	0.42	-0.7
3,863,545	-		CCNA_03696	0.42	+0.3
3,863,555	-		CCNA_03696	0.42	-0.7
3,863,576	-		CCNA_03696	0.43	+0.1
3,863,581	-		CCNA_03696	0.44	-1.6
3,863,581	-		CCNA_03696	0.44	+0.1
3,863,582	+		CCNA_03696	0.44	+0.1
3,863,593	+		CCNA_03696	0.44	+0.3
3,863,599	-		CCNA_03696	0.45	-0.7
3,863,609	-		CCNA_03696	0.45	-0.4