Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03401

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,569,382	-				-0.1
3,569,389	-				-1.1
3,569,389	-				+0.4
3,569,433	+				-0.1
3,569,578	-		CCNA_03399	0.33	-0.6
3,569,639	-		CCNA_03399	0.42	+1.5
3,569,708	+		CCNA_03399	0.54	+1.4
3,569,711	-		CCNA_03399	0.54	-0.2
3,569,711	-		CCNA_03399	0.54	-0.8
3,569,716	-		CCNA_03399	0.55	-0.3
3,569,723	+		CCNA_03399	0.56	-0.2
3,569,789	+		CCNA_03399	0.67	+1.5
3,569,789	+		CCNA_03399	0.67	+0.3
3,569,842	+		CCNA_03399	0.75	-0.7
3,569,842	+		CCNA_03399	0.75	-0.7
3,569,849	-		CCNA_03399	0.76	+1.0
3,570,069	-				+0.0
3,570,114	+				+0.7
3,570,121	+				+0.3
3,570,129	-				-0.7
3,570,158	-		CCNA_03400	0.20	-0.2
3,570,223	+		CCNA_03400	0.57	+1.3
3,570,234	+		CCNA_03400	0.63	+0.1
3,570,375	+				-0.5
3,570,376	+				-0.1
3,570,383	-				+0.8
3,570,383	-				+0.0
3,570,441	-				-0.7
3,570,441	-				-0.9
3,570,452	-		CCNA_03401	0.10	+0.4
3,570,462	-		CCNA_03401	0.12	-0.7
3,570,483	-		CCNA_03401	0.15	-0.1
3,570,495	-		CCNA_03401	0.16	-0.6
3,570,529	-		CCNA_03401	0.21	+0.0
3,570,628	-		CCNA_03401	0.35	-0.7
3,570,651	-		CCNA_03401	0.38	-1.0
3,570,699	-		CCNA_03401	0.45	+0.4
3,570,790	-		CCNA_03401	0.58	-1.8
3,570,855	+		CCNA_03401	0.67	-1.6
3,570,888	-		CCNA_03401	0.71	+0.7
3,570,905	-		CCNA_03401	0.74	-0.4
3,571,080	-				+0.4
3,571,150	+				-0.6
3,571,208	+				-0.2
3,571,216	-				+0.6
3,571,243	+				-0.2
3,571,277	-				+0.1
3,571,277	-				+0.1
3,571,277	-				+0.1
3,571,288	-				+0.2
3,571,353	-		CCNA_03402	0.12	+1.4
3,571,355	+		CCNA_03402	0.13	-0.4
3,571,355	+		CCNA_03402	0.13	-1.0
3,571,358	-		CCNA_03402	0.13	+0.7
3,571,363	-		CCNA_03402	0.13	-0.8
3,571,405	-		CCNA_03402	0.18	+0.1
3,571,423	-		CCNA_03402	0.20	+1.0
3,571,446	-		CCNA_03402	0.22	+0.3
3,571,455	+		CCNA_03402	0.23	-1.7
3,571,463	-		CCNA_03402	0.24	+0.2
3,571,465	+		CCNA_03402	0.24	-0.3
3,571,530	-		CCNA_03402	0.31	+0.3
3,571,530	-		CCNA_03402	0.31	+0.2
3,571,538	-		CCNA_03402	0.31	-0.3
3,571,606	-		CCNA_03402	0.38	+0.0
3,571,616	+		CCNA_03402	0.39	+0.5
3,571,624	-		CCNA_03402	0.40	-0.1
3,571,624	-		CCNA_03402	0.40	-0.3
3,571,624	-		CCNA_03402	0.40	+0.4
3,571,626	-		CCNA_03402	0.40	+0.7
3,571,661	+		CCNA_03402	0.44	-0.3
3,571,662	+		CCNA_03402	0.44	-0.6
3,571,662	-		CCNA_03402	0.44	+0.1
3,571,695	+		CCNA_03402	0.47	-0.1
3,571,710	-		CCNA_03402	0.49	-1.6
3,571,724	-		CCNA_03402	0.50	+0.8
3,571,748	-		CCNA_03402	0.53	+0.8
3,571,793	-		CCNA_03402	0.58	+0.1
3,571,810	+		CCNA_03402	0.59	-1.2
3,571,814	+		CCNA_03402	0.60	+1.1
3,571,822	-		CCNA_03402	0.61	+2.5
3,571,841	-		CCNA_03402	0.62	-1.3
3,571,841	-		CCNA_03402	0.62	-0.1
3,571,851	+		CCNA_03402	0.63	+0.5
3,571,869	-		CCNA_03402	0.65	-0.0
3,571,903	-		CCNA_03402	0.69	-0.7
3,571,904	-		CCNA_03402	0.69	-0.1
3,571,931	+		CCNA_03402	0.72	-0.1
3,571,931	+		CCNA_03402	0.72	-0.9
3,571,931	+		CCNA_03402	0.72	-0.4
3,571,939	-		CCNA_03402	0.73	+1.0
3,571,939	-		CCNA_03402	0.73	+0.1
3,571,939	-		CCNA_03402	0.73	+1.1
3,571,941	+		CCNA_03402	0.73	-0.4
3,571,968	-		CCNA_03402	0.75	+0.2
3,571,987	-		CCNA_03402	0.77	+1.0
3,571,987	-		CCNA_03402	0.77	+1.3
3,571,999	+		CCNA_03402	0.79	+0.5
3,571,999	+		CCNA_03402	0.79	+0.3
3,571,999	+		CCNA_03402	0.79	+0.1
3,572,007	-		CCNA_03402	0.79	+0.1
3,572,007	-		CCNA_03402	0.79	+0.7
3,572,007	-		CCNA_03402	0.79	-0.0
3,572,047	-		CCNA_03402	0.84	-0.1
3,572,070	-		CCNA_03402	0.86	+1.1