Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03348

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,527,086	-		CCNA_03347	0.42	-0.1
3,527,094	+		CCNA_03347	0.43	-0.6
3,527,094	+		CCNA_03347	0.43	+0.7
3,527,094	+		CCNA_03347	0.43	-0.2
3,527,116	+		CCNA_03347	0.45	-0.6
3,527,119	-		CCNA_03347	0.45	-1.6
3,527,119	-		CCNA_03347	0.45	-0.7
3,527,124	-		CCNA_03347	0.45	+0.5
3,527,124	-		CCNA_03347	0.45	+0.7
3,527,124	-		CCNA_03347	0.45	+0.1
3,527,138	+		CCNA_03347	0.46	-0.3
3,527,146	-		CCNA_03347	0.47	-0.3
3,527,148	+		CCNA_03347	0.47	-0.7
3,527,155	+		CCNA_03347	0.47	-0.4
3,527,184	-		CCNA_03347	0.49	-0.2
3,527,190	-		CCNA_03347	0.50	+0.9
3,527,206	-		CCNA_03347	0.51	+0.0
3,527,221	-		CCNA_03347	0.52	+0.3
3,527,246	+		CCNA_03347	0.54	-0.7
3,527,255	-		CCNA_03347	0.54	+0.8
3,527,255	-		CCNA_03347	0.54	-0.7
3,527,292	+		CCNA_03347	0.57	-0.6
3,527,302	+		CCNA_03347	0.58	-0.3
3,527,302	+		CCNA_03347	0.58	-1.6
3,527,302	+		CCNA_03347	0.58	-0.9
3,527,307	+		CCNA_03347	0.58	+0.2
3,527,307	+		CCNA_03347	0.58	-1.2
3,527,310	-		CCNA_03347	0.58	+0.1
3,527,313	+		CCNA_03347	0.58	-0.7
3,527,334	+		CCNA_03347	0.60	+0.6
3,527,344	+		CCNA_03347	0.61	+1.1
3,527,422	+		CCNA_03347	0.66	-0.6
3,527,466	-		CCNA_03347	0.69	-1.0
3,527,466	-		CCNA_03347	0.69	+0.6
3,527,496	+		CCNA_03347	0.71	+0.0
3,527,496	-		CCNA_03347	0.71	+0.4
3,527,501	+		CCNA_03347	0.72	-0.4
3,527,503	+		CCNA_03347	0.72	+0.2
3,527,517	+		CCNA_03347	0.73	-1.9
3,527,517	+		CCNA_03347	0.73	+0.0
3,527,541	+		CCNA_03347	0.74	+0.7
3,527,548	+		CCNA_03347	0.75	+0.4
3,527,548	+		CCNA_03347	0.75	+1.5
3,527,548	+		CCNA_03347	0.75	+0.6
3,527,548	+		CCNA_03347	0.75	+0.0
3,527,548	+		CCNA_03347	0.75	-1.2
3,527,553	+		CCNA_03347	0.75	+1.3
3,527,556	-		CCNA_03347	0.75	-0.5
3,527,556	-		CCNA_03347	0.75	+0.1
3,527,556	-		CCNA_03347	0.75	+0.4
3,527,556	-		CCNA_03347	0.75	-0.1
3,527,556	-		CCNA_03347	0.75	-0.6
3,527,556	-		CCNA_03347	0.75	-1.6
3,527,556	-		CCNA_03347	0.75	-1.7
3,527,561	-		CCNA_03347	0.76	+1.1
3,527,592	+		CCNA_03347	0.78	-0.5
3,527,610	+		CCNA_03347	0.79	-0.1
3,527,610	+		CCNA_03347	0.79	-0.4
3,527,618	-		CCNA_03347	0.80	+0.7
3,527,618	-		CCNA_03347	0.80	-0.5
3,527,618	-		CCNA_03347	0.80	+0.5
3,527,618	-		CCNA_03347	0.80	-0.4
3,527,663	+				+0.2
3,527,671	-				-0.2
3,527,683	+				+0.2
3,527,684	-				+0.9
3,527,686	+				+0.7
3,527,691	-				+0.4
3,527,714	-				-0.1
3,527,738	+				+0.6
3,527,738	+				-0.1
3,527,738	+				-0.2
3,527,738	+				-0.5
3,527,738	+				-0.5
3,527,738	+				+0.9
3,527,738	+				+0.1
3,527,738	+				-0.3
3,527,745	+				-0.7
3,527,746	-				-1.0
3,527,746	-				-1.0
3,527,746	-				-1.2
3,527,746	-				+0.2
3,527,746	-				+0.4
3,527,746	-				-2.7
3,527,746	-				-0.0
3,527,746	-				-0.2
3,527,746	-				-1.0
3,527,746	-				+0.3
3,527,785	+				-0.4
3,527,793	+				+1.2
3,527,793	-				-1.0
3,527,793	-				-0.2
3,527,793	-				-0.1
3,527,801	-				+0.3
3,527,817	+				+0.7
3,527,817	+				+0.2
3,527,817	+				+1.0
3,527,825	-				+1.2
3,527,825	-				-0.8
3,527,825	-				-0.4
3,527,825	-				-0.7
3,527,874	+				+0.7
3,527,874	+				-0.5
3,527,874	+				+0.1
3,527,874	+				-0.1
3,527,874	+				-1.3
3,527,879	+				-0.7
3,527,879	+				-0.1
3,527,879	+				+1.7
3,527,882	-				-0.1
3,527,882	-				+0.1
3,527,882	-				-0.6
3,527,882	-				-0.2
3,527,882	-				+0.5
3,527,884	+				+1.5
3,527,887	-				-1.1
3,527,916	+		CCNA_03991	0.88	+0.9
3,527,933	-				-1.8
3,527,948	-				-0.2
3,527,953	-				-0.4
3,527,990	-				-0.2
3,528,018	-				-0.2
3,528,023	-				-0.1
3,528,028	-				+0.0
3,528,053	-				-0.4
3,528,156	+		CCNA_03348	0.14	+0.4
3,528,156	-		CCNA_03348	0.14	-1.3
3,528,162	+		CCNA_03348	0.14	-1.2
3,528,164	-		CCNA_03348	0.15	+0.2
3,528,184	-		CCNA_03348	0.17	+0.2
3,528,258	+		CCNA_03348	0.24	+0.9
3,528,258	+		CCNA_03348	0.24	+0.6
3,528,266	-		CCNA_03348	0.25	-0.4
3,528,268	+		CCNA_03348	0.25	+0.5
3,528,276	-		CCNA_03348	0.26	-0.6
3,528,289	-		CCNA_03348	0.28	-0.2
3,528,289	-		CCNA_03348	0.28	-1.5
3,528,368	-		CCNA_03348	0.36	-1.6
3,528,377	+		CCNA_03348	0.37	-0.3
3,528,377	+		CCNA_03348	0.37	+2.3
3,528,385	-		CCNA_03348	0.38	-0.1
3,528,395	-		CCNA_03348	0.39	-0.8
3,528,396	-		CCNA_03348	0.39	-0.6
3,528,408	+		CCNA_03348	0.40	+0.2
3,528,427	-		CCNA_03348	0.42	-1.1
3,528,442	-		CCNA_03348	0.44	-1.7
3,528,477	+		CCNA_03348	0.47	-0.1
3,528,488	+		CCNA_03348	0.48	-0.3
3,528,496	-		CCNA_03348	0.49	-0.1
3,528,508	-		CCNA_03348	0.50	-0.2
3,528,509	-		CCNA_03348	0.51	+0.9
3,528,535	+		CCNA_03348	0.53	-1.8
3,528,584	+		CCNA_03348	0.58	+0.2
3,528,750	+		CCNA_03348	0.76	-1.0
3,528,757	-		CCNA_03348	0.76	+0.1
3,528,767	-		CCNA_03348	0.78	+0.1
3,528,769	+		CCNA_03348	0.78	-0.3
3,528,881	-		CCNA_03348	0.89	+0.3
3,528,881	-		CCNA_03348	0.89	-0.7
3,528,889	+				-0.1
3,528,897	-				+1.0
3,528,931	-				-0.3
3,528,938	-				-0.5
3,528,946	+				-1.2
3,528,960	-				-0.2
3,528,971	-				-0.2
3,528,975	+				-0.6
3,528,999	-		CCNA_03349	0.11	-0.3
3,528,999	-		CCNA_03349	0.11	+0.1
3,528,999	-		CCNA_03349	0.11	-0.2
3,529,026	-		CCNA_03349	0.25	-0.3
3,529,034	+		CCNA_03349	0.30	+0.6
3,529,035	+		CCNA_03349	0.30	+0.0
3,529,043	-		CCNA_03349	0.34	-0.5
3,529,043	-		CCNA_03349	0.34	+0.3
3,529,043	-		CCNA_03349	0.34	+0.9
3,529,043	-		CCNA_03349	0.34	-0.3
3,529,044	+		CCNA_03349	0.35	+0.5
3,529,058	-		CCNA_03349	0.42	-0.3
3,529,087	-		CCNA_03349	0.58	-0.1
3,529,105	+		CCNA_03349	0.67	+0.6
3,529,113	+		CCNA_03349	0.71	+0.1
3,529,187	-				-1.0
3,529,194	-				-0.8
3,529,234	-				-0.6
3,529,240	+		CCNA_03350	0.13	-0.9
3,529,291	-		CCNA_03350	0.38	-0.0
3,529,317	-		CCNA_03350	0.52	+0.1
3,529,346	-		CCNA_03350	0.66	+0.3
3,529,368	-		CCNA_03350	0.77	+0.2
3,529,370	+		CCNA_03350	0.78	+0.2
3,529,378	+		CCNA_03350	0.82	-1.1
3,529,397	+				+0.1
3,529,405	-				-0.6
3,529,415	+				-2.0
3,529,423	-				+0.3
3,529,423	-				+0.3
3,529,465	-				-0.6
3,529,493	+				-0.4
3,529,493	+				-1.0
3,529,493	+				-0.3
3,529,496	-				+0.7
3,529,496	-				-0.8
3,529,523	+		CCNA_03351	0.11	-0.0
3,529,529	-		CCNA_03351	0.12	+0.2
3,529,531	-		CCNA_03351	0.12	+0.0
3,529,541	-		CCNA_03351	0.13	-0.3
3,529,616	+		CCNA_03351	0.21	-0.1
3,529,634	+		CCNA_03351	0.22	+0.1
3,529,636	+		CCNA_03351	0.23	-0.5
3,529,656	-		CCNA_03351	0.25	+0.2
3,529,661	-		CCNA_03351	0.25	-0.2
3,529,677	-		CCNA_03351	0.27	-0.4
3,529,692	-		CCNA_03351	0.28	-1.0
3,529,705	-		CCNA_03351	0.30	+1.0
3,529,724	-		CCNA_03351	0.32	+0.2
3,529,739	+		CCNA_03351	0.33	-0.1
3,529,740	+		CCNA_03351	0.33	-0.3
3,529,744	+		CCNA_03351	0.34	+0.2
3,529,744	+		CCNA_03351	0.34	-0.1
3,529,747	-		CCNA_03351	0.34	+0.5
3,529,748	-		CCNA_03351	0.34	+0.4
3,529,752	-		CCNA_03351	0.35	-1.2
3,529,777	+		CCNA_03351	0.37	-0.7
3,529,797	+		CCNA_03351	0.39	-1.0
3,529,822	+		CCNA_03351	0.42	-0.5
3,529,826	-		CCNA_03351	0.42	-1.0
3,529,826	-		CCNA_03351	0.42	+0.4
3,529,830	-		CCNA_03351	0.43	-0.1
3,529,830	-		CCNA_03351	0.43	-0.3
3,529,831	-		CCNA_03351	0.43	+0.5
3,529,836	+		CCNA_03351	0.43	-0.7
3,529,836	+		CCNA_03351	0.43	+0.0
3,529,868	-		CCNA_03351	0.47	+0.4
3,529,903	-		CCNA_03351	0.50	+0.1
3,529,929	+		CCNA_03351	0.53	+0.2
3,529,940	+		CCNA_03351	0.54	+0.0
3,529,947	-		CCNA_03351	0.55	+0.4
3,529,950	+		CCNA_03351	0.55	-0.2