Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03246

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,411,386	-		CCNA_03245	0.28	-0.7
3,411,386	-		CCNA_03245	0.28	-0.9
3,411,390	+		CCNA_03245	0.28	+0.9
3,411,396	+		CCNA_03245	0.29	-0.9
3,411,400	+		CCNA_03245	0.29	-0.5
3,411,422	+		CCNA_03245	0.31	-0.6
3,411,422	+		CCNA_03245	0.31	-0.4
3,411,423	+		CCNA_03245	0.31	-0.6
3,411,445	-		CCNA_03245	0.32	-0.4
3,411,462	-		CCNA_03245	0.34	-1.0
3,411,498	+		CCNA_03245	0.36	+0.0
3,411,556	+		CCNA_03245	0.41	+1.4
3,411,564	-		CCNA_03245	0.41	-0.5
3,411,564	-		CCNA_03245	0.41	-0.2
3,411,564	-		CCNA_03245	0.41	-0.8
3,411,564	-		CCNA_03245	0.41	+1.8
3,411,564	-		CCNA_03245	0.41	-1.5
3,411,569	+		CCNA_03245	0.42	+0.8
3,411,575	+		CCNA_03245	0.42	-1.0
3,411,583	-		CCNA_03245	0.43	+2.6
3,411,585	-		CCNA_03245	0.43	-0.1
3,411,594	+		CCNA_03245	0.44	-0.1
3,411,594	+		CCNA_03245	0.44	-0.5
3,411,594	+		CCNA_03245	0.44	+1.1
3,411,602	-		CCNA_03245	0.44	+0.4
3,411,602	-		CCNA_03245	0.44	-0.3
3,411,602	-		CCNA_03245	0.44	-0.3
3,411,602	-		CCNA_03245	0.44	-0.9
3,411,621	+		CCNA_03245	0.46	-0.4
3,411,652	+		CCNA_03245	0.48	-0.0
3,411,659	-		CCNA_03245	0.48	-0.1
3,411,719	+		CCNA_03245	0.53	-0.1
3,411,773	-		CCNA_03245	0.57	-1.8
3,411,801	-		CCNA_03245	0.59	+0.1
3,411,811	-		CCNA_03245	0.60	-0.2
3,411,846	+		CCNA_03245	0.63	-0.1
3,411,854	-		CCNA_03245	0.63	-0.7
3,411,854	-		CCNA_03245	0.63	-0.4
3,411,866	+		CCNA_03245	0.64	+0.8
3,411,867	+		CCNA_03245	0.64	+0.5
3,411,869	-		CCNA_03245	0.64	-1.0
3,411,875	-		CCNA_03245	0.65	+0.6
3,411,882	+		CCNA_03245	0.65	-0.1
3,411,890	-		CCNA_03245	0.66	+0.9
3,411,917	+		CCNA_03245	0.68	+0.5
3,411,917	+		CCNA_03245	0.68	-0.5
3,411,925	-		CCNA_03245	0.68	+0.2
3,411,948	-		CCNA_03245	0.70	+0.1
3,411,953	+		CCNA_03245	0.71	-0.2
3,411,961	-		CCNA_03245	0.71	-0.6
3,411,962	+		CCNA_03245	0.71	-0.2
3,411,978	+		CCNA_03245	0.72	+0.9
3,412,027	-		CCNA_03245	0.76	+0.6
3,412,040	+		CCNA_03245	0.77	+0.4
3,412,089	+		CCNA_03245	0.81	-0.4
3,412,097	-		CCNA_03245	0.81	+0.9
3,412,140	-		CCNA_03245	0.85	-1.1
3,412,156	+		CCNA_03245	0.86	+0.1
3,412,156	+		CCNA_03245	0.86	+1.5
3,412,164	-		CCNA_03245	0.86	-1.1
3,412,177	+		CCNA_03245	0.87	+0.2
3,412,213	+				-1.0
3,412,224	+				-0.7
3,412,227	+				+0.1
3,412,227	+				-0.7
3,412,227	+				-0.0
3,412,232	-				-0.9
3,412,235	-				-0.1
3,412,235	-				+0.4
3,412,314	+				-0.5
3,412,328	+				-0.5
3,412,331	-				-0.0
3,412,331	-				-0.8
3,412,346	-				-0.3
3,412,346	-				+0.4
3,412,348	+				-0.5
3,412,473	+				-0.7
3,412,486	-		CCNA_03246	0.11	+0.3
3,412,490	+		CCNA_03246	0.11	+0.1
3,412,498	+		CCNA_03246	0.12	-1.1
3,412,503	+		CCNA_03246	0.12	-0.2
3,412,511	-		CCNA_03246	0.13	+0.4
3,412,521	-		CCNA_03246	0.14	-0.4
3,412,581	-		CCNA_03246	0.20	-0.8
3,412,602	-		CCNA_03246	0.22	-0.8
3,412,639	+		CCNA_03246	0.25	-0.5
3,412,640	-		CCNA_03246	0.25	+0.3
3,412,706	-		CCNA_03246	0.31	-0.6
3,412,725	+		CCNA_03246	0.33	+0.3
3,412,733	-		CCNA_03246	0.34	+0.4
3,412,768	+		CCNA_03246	0.37	+0.7
3,412,768	+		CCNA_03246	0.37	+0.1
3,412,768	+		CCNA_03246	0.37	-0.2
3,412,781	-		CCNA_03246	0.38	+0.4
3,412,812	-		CCNA_03246	0.41	-1.4
3,412,824	+		CCNA_03246	0.43	-1.4
3,412,829	+		CCNA_03246	0.43	-0.1
3,412,829	+		CCNA_03246	0.43	+1.3
3,412,837	-		CCNA_03246	0.44	+0.5
3,412,837	-		CCNA_03246	0.44	+0.1
3,412,841	+		CCNA_03246	0.44	-0.1
3,412,841	+		CCNA_03246	0.44	-0.4
3,412,849	-		CCNA_03246	0.45	-1.3
3,412,849	-		CCNA_03246	0.45	+0.9
3,412,874	+		CCNA_03246	0.47	+0.1
3,412,882	-		CCNA_03246	0.48	-0.0
3,412,889	+		CCNA_03246	0.49	-0.9
3,412,905	+		CCNA_03246	0.50	-0.5
3,412,943	+		CCNA_03246	0.54	-0.1
3,412,949	-		CCNA_03246	0.54	-0.1
3,412,951	+		CCNA_03246	0.54	-1.8
3,412,951	+		CCNA_03246	0.54	-1.3
3,412,951	-		CCNA_03246	0.54	+0.3
3,412,951	-		CCNA_03246	0.54	+0.2
3,412,966	-		CCNA_03246	0.56	-0.9
3,412,971	-		CCNA_03246	0.56	-0.4
3,413,002	-		CCNA_03246	0.59	-0.7
3,413,023	+		CCNA_03246	0.61	-0.4
3,413,084	+		CCNA_03246	0.67	-0.0
3,413,092	-		CCNA_03246	0.68	+1.1
3,413,210	-		CCNA_03246	0.79	+0.2
3,413,217	+		CCNA_03246	0.79	+0.9
3,413,217	+		CCNA_03246	0.79	-1.0
3,413,225	-		CCNA_03246	0.80	-0.2
3,413,249	-		CCNA_03246	0.82	+1.5
3,413,249	-		CCNA_03246	0.82	+0.8
3,413,249	-		CCNA_03246	0.82	+0.4
3,413,303	+		CCNA_03246	0.88	+1.8
3,413,303	+		CCNA_03246	0.88	-1.7
3,413,303	+		CCNA_03246	0.88	+0.8
3,413,311	-		CCNA_03246	0.88	-0.4
3,413,311	-		CCNA_03246	0.88	-0.3
3,413,331	+				-0.4
3,413,339	-				-0.1
3,413,339	-				+0.6
3,413,346	+				-1.5
3,413,354	-				+0.6
3,413,360	-				-0.0
3,413,392	+				+0.2
3,413,402	-				+0.2
3,413,402	-				-0.2
3,413,451	+				-0.0
3,413,452	+				-1.0
3,413,492	+				+0.5
3,413,510	-				-0.1
3,413,559	+				-0.5
3,413,559	+				-0.3
3,413,565	-				+0.2
3,413,565	-				-0.4
3,413,565	-				-0.6
3,413,567	-				+1.0
3,413,567	-				-0.6
3,413,567	-				-0.3
3,413,567	-				-0.2
3,413,567	-				+0.5
3,413,611	+				+0.6
3,413,611	+				-0.5
3,413,612	+				-0.8
3,413,637	+				-0.3
3,413,656	-				-1.6
3,413,666	+				-1.2
3,413,666	+				+0.3
3,413,666	-				+0.1
3,413,727	+				-0.2
3,413,735	-				+0.2
3,413,750	+				+0.8
3,413,764	+				+1.6
3,413,772	-				-0.1
3,413,784	+				+0.3
3,413,792	-				+2.0
3,413,792	-				-0.0
3,413,841	+				+0.4
3,413,913	+				+0.4
3,413,913	+				+0.8
3,413,970	-		CCNA_03247	0.11	-0.7
3,413,980	-		CCNA_03247	0.12	-0.3
3,414,004	-		CCNA_03247	0.13	-1.7
3,414,006	+		CCNA_03247	0.13	-1.0
3,414,008	+		CCNA_03247	0.13	+0.3
3,414,014	-		CCNA_03247	0.14	-1.3
3,414,016	-		CCNA_03247	0.14	+0.2
3,414,016	-		CCNA_03247	0.14	-1.3
3,414,082	-		CCNA_03247	0.17	-0.6
3,414,098	+		CCNA_03247	0.18	-0.9
3,414,098	+		CCNA_03247	0.18	+0.0
3,414,106	-		CCNA_03247	0.19	+0.5
3,414,164	+		CCNA_03247	0.22	+0.4
3,414,164	+		CCNA_03247	0.22	+0.6
3,414,164	+		CCNA_03247	0.22	+0.4
3,414,164	+		CCNA_03247	0.22	-0.0
3,414,172	-		CCNA_03247	0.22	-0.3
3,414,172	-		CCNA_03247	0.22	-1.1
3,414,172	-		CCNA_03247	0.22	-1.4
3,414,172	-		CCNA_03247	0.22	-2.2
3,414,172	-		CCNA_03247	0.22	+0.5
3,414,203	+		CCNA_03247	0.24	+0.6
3,414,222	+		CCNA_03247	0.25	+0.5
3,414,222	+		CCNA_03247	0.25	+0.6
3,414,230	-		CCNA_03247	0.26	-0.9
3,414,230	-		CCNA_03247	0.26	-2.9
3,414,280	-		CCNA_03247	0.28	+0.5
3,414,285	+		CCNA_03247	0.29	+0.1
3,414,285	+		CCNA_03247	0.29	+0.5
3,414,300	+		CCNA_03247	0.29	-0.2
3,414,333	+		CCNA_03247	0.31	+0.0
3,414,349	+		CCNA_03247	0.32	-0.0
3,414,359	+		CCNA_03247	0.33	+0.7
3,414,362	-		CCNA_03247	0.33	-0.8
3,414,364	+		CCNA_03247	0.33	-0.1