Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02449

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
2,588,933	+		CCNA_02447	0.80	-0.5
2,588,941	-		CCNA_02447	0.81	+0.2
2,588,954	+		CCNA_02447	0.82	-0.4
2,588,954	+		CCNA_02447	0.82	-0.0
2,588,954	+		CCNA_02447	0.82	-0.2
2,588,959	+		CCNA_02447	0.83	-0.7
2,588,962	-		CCNA_02447	0.83	+0.5
2,589,016	-				-0.2
2,589,028	-				+1.0
2,589,037	+				-0.6
2,589,037	+				+0.5
2,589,045	-				+0.0
2,589,045	-				+0.7
2,589,045	-				+1.5
2,589,050	+				-1.9
2,589,055	+				+0.1
2,589,058	-				+0.2
2,589,063	-				-0.8
2,589,063	-				-0.1
2,589,070	-				+0.4
2,589,070	-				+0.3
2,589,085	+				+0.4
2,589,107	+				-1.4
2,589,229	-		CCNA_02448	0.18	+0.1
2,589,303	+		CCNA_02448	0.29	+0.7
2,589,303	+		CCNA_02448	0.29	-0.4
2,589,318	-		CCNA_02448	0.31	+0.3
2,589,366	+		CCNA_02448	0.38	-1.8
2,589,386	+		CCNA_02448	0.41	+0.1
2,589,386	+		CCNA_02448	0.41	-0.8
2,589,387	+		CCNA_02448	0.41	+0.5
2,589,394	-		CCNA_02448	0.42	-0.0
2,589,473	+		CCNA_02448	0.54	+1.0
2,589,491	-		CCNA_02448	0.57	+0.4
2,589,530	+		CCNA_02448	0.62	+1.2
2,589,538	-		CCNA_02448	0.64	+1.3
2,589,539	-		CCNA_02448	0.64	-0.0
2,589,554	+		CCNA_02448	0.66	-0.0
2,589,562	+		CCNA_02448	0.67	-1.2
2,589,580	+		CCNA_02448	0.70	+0.2
2,589,580	+		CCNA_02448	0.70	-0.0
2,589,588	-		CCNA_02448	0.71	+0.3
2,589,588	-		CCNA_02448	0.71	+0.6
2,589,595	+		CCNA_02448	0.72	-0.2
2,589,598	-		CCNA_02448	0.72	+0.3
2,589,634	+		CCNA_02448	0.78	-0.2
2,589,639	+		CCNA_02448	0.79	+0.7
2,589,639	+		CCNA_02448	0.79	+0.7
2,589,647	-		CCNA_02448	0.80	+0.1
2,589,649	+		CCNA_02448	0.80	+0.5
2,589,649	+		CCNA_02448	0.80	-0.2
2,589,657	-		CCNA_02448	0.81	+0.9
2,589,749	-				+0.7
2,589,755	+				+1.5
2,589,768	-				+0.3
2,589,771	-				+0.5
2,589,778	-				-0.4
2,589,845	+				+0.1
2,589,865	-				-1.9
2,589,898	-				-1.9
2,589,982	+				-0.1
2,589,982	+				+0.0
2,590,021	+		CCNA_02449	0.14	-1.4
2,590,043	+		CCNA_02449	0.17	-1.0
2,590,070	-		CCNA_02449	0.21	-1.4
2,590,102	+		CCNA_02449	0.26	+0.4
2,590,102	+		CCNA_02449	0.26	-1.5
2,590,108	+		CCNA_02449	0.27	+0.2
2,590,146	+		CCNA_02449	0.33	-0.5
2,590,154	-		CCNA_02449	0.34	-0.0
2,590,198	+		CCNA_02449	0.41	+0.7
2,590,214	+		CCNA_02449	0.43	-1.4
2,590,301	-		CCNA_02449	0.57	+0.0
2,590,311	-		CCNA_02449	0.58	-1.9
2,590,341	-		CCNA_02449	0.63	-2.4
2,590,360	+		CCNA_02449	0.66	-0.7
2,590,362	+		CCNA_02449	0.66	+0.7
2,590,377	-		CCNA_02449	0.68	+0.2
2,590,384	+		CCNA_02449	0.69	+0.3
2,590,387	+		CCNA_02449	0.70	-1.6
2,590,406	+		CCNA_02449	0.73	-0.8
2,590,429	-		CCNA_02449	0.76	+0.5
2,590,434	-		CCNA_02449	0.77	-1.9
2,590,439	+		CCNA_02449	0.78	-0.9
2,590,439	-		CCNA_02449	0.78	-1.2
2,590,439	-		CCNA_02449	0.78	-2.0
2,590,439	-		CCNA_02449	0.78	-1.7
2,590,447	-		CCNA_02449	0.79	-1.8
2,590,452	-		CCNA_02449	0.80	-1.6
2,590,503	-		CCNA_02449	0.87	+0.2
2,590,526	-				-0.0
2,590,526	-				-1.9
2,590,572	+				+0.3
2,590,572	+				+1.6
2,590,580	-				-1.6
2,590,580	-				-1.6
2,590,587	-				-1.7
2,590,602	-				+0.2
2,590,609	+				-0.7
2,590,685	-				-1.1
2,590,685	-				+0.7
2,590,715	+				-1.0
2,590,723	-				-0.6
2,590,742	-				+0.2
2,590,742	-				+1.4
2,590,743	+				+0.1
2,590,743	+				+0.2
2,590,743	+				-1.1
2,590,809	+		CCNA_02450	0.14	+0.1
2,590,841	-		CCNA_02450	0.21	-0.3
2,590,843	-		CCNA_02450	0.22	-1.6
2,590,847	-		CCNA_02450	0.23	-0.1
2,590,853	-		CCNA_02450	0.24	+0.6
2,590,857	+		CCNA_02450	0.25	+0.2
2,590,865	-		CCNA_02450	0.27	-0.1
2,590,865	-		CCNA_02450	0.27	-1.3
2,590,865	-		CCNA_02450	0.27	-1.5
2,590,893	-		CCNA_02450	0.33	-1.3
2,590,904	+		CCNA_02450	0.36	+0.2
2,590,926	+		CCNA_02450	0.41	+0.5
2,590,926	+		CCNA_02450	0.41	+0.2
2,590,934	-		CCNA_02450	0.43	+0.5
2,590,938	+		CCNA_02450	0.44	+0.8
2,590,939	-		CCNA_02450	0.44	-1.2
2,590,948	+		CCNA_02450	0.46	+0.3
2,590,948	+		CCNA_02450	0.46	-0.1
2,590,948	+		CCNA_02450	0.46	+0.1
2,590,948	+		CCNA_02450	0.46	+0.2
2,590,948	+		CCNA_02450	0.46	+0.6
2,590,953	+		CCNA_02450	0.47	+0.4
2,590,956	-		CCNA_02450	0.48	-0.2
2,590,956	-		CCNA_02450	0.48	-0.7
2,590,956	-		CCNA_02450	0.48	-2.9
2,590,961	-		CCNA_02450	0.49	-1.3
2,590,961	-		CCNA_02450	0.49	-1.2
2,590,971	+		CCNA_02450	0.51	+0.6
2,590,978	+		CCNA_02450	0.53	+1.8
2,590,978	+		CCNA_02450	0.53	+0.1
2,590,979	-		CCNA_02450	0.53	-0.6
2,590,984	-		CCNA_02450	0.54	-0.6
2,591,002	-		CCNA_02450	0.59	-0.9
2,591,016	+		CCNA_02450	0.62	+1.6
2,591,047	+		CCNA_02450	0.69	+0.6
2,591,048	+		CCNA_02450	0.69	-0.8
2,591,061	-		CCNA_02450	0.72	-0.2
2,591,078	+		CCNA_02450	0.76	+0.9
2,591,100	+		CCNA_02450	0.81	-0.8
2,591,124	-		CCNA_02450	0.87	-0.1
2,591,161	-				-0.0
2,591,161	-				-0.5
2,591,176	+				+0.8
2,591,176	+				+0.8
2,591,176	+				+0.3
2,591,176	+				-0.2
2,591,176	+				-0.8
2,591,176	+				+0.2
2,591,176	+				+0.6
2,591,184	-				+0.1
2,591,184	-				-0.9
2,591,184	-				-1.3
2,591,184	-				+0.8
2,591,184	-				-0.4
2,591,184	-				-0.2
2,591,184	-				-1.1
2,591,184	-				+0.7
2,591,184	-				-0.4
2,591,184	-				-0.5
2,591,184	-				-2.5
2,591,184	-				+0.2
2,591,208	-				-1.4
2,591,259	+		CCNA_02451	0.11	+0.5
2,591,263	-		CCNA_02451	0.11	-0.7
2,591,263	-		CCNA_02451	0.11	+0.3
2,591,287	+		CCNA_02451	0.15	+1.3
2,591,292	+		CCNA_02451	0.16	-1.2
2,591,322	+		CCNA_02451	0.20	+0.8
2,591,323	+		CCNA_02451	0.20	-0.1
2,591,330	-		CCNA_02451	0.22	-3.7
2,591,331	-		CCNA_02451	0.22	+0.2
2,591,419	-		CCNA_02451	0.35	-0.0
2,591,470	+		CCNA_02451	0.43	-2.5
2,591,486	+		CCNA_02451	0.46	-0.0
2,591,552	+		CCNA_02451	0.56	+0.5
2,591,557	+		CCNA_02451	0.57	+0.2
2,591,560	-		CCNA_02451	0.57	-1.4
2,591,565	-		CCNA_02451	0.58	+1.5
2,591,565	-		CCNA_02451	0.58	-1.5
2,591,568	-		CCNA_02451	0.58	+0.8