Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01844

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,975,179	+		CCNA_01843	0.46	-0.1
1,975,191	+		CCNA_01843	0.47	-0.1
1,975,230	-		CCNA_01843	0.49	-1.8
1,975,258	+		CCNA_01843	0.51	-0.0
1,975,258	+		CCNA_01843	0.51	-1.0
1,975,266	-		CCNA_01843	0.52	+1.5
1,975,266	-		CCNA_01843	0.52	-1.7
1,975,287	-		CCNA_01843	0.53	+1.6
1,975,353	-		CCNA_01843	0.57	-0.2
1,975,357	+		CCNA_01843	0.57	-0.8
1,975,359	-		CCNA_01843	0.58	-1.6
1,975,362	+		CCNA_01843	0.58	+1.1
1,975,364	-		CCNA_01843	0.58	-0.3
1,975,392	+		CCNA_01843	0.60	-0.4
1,975,401	-		CCNA_01843	0.60	+0.7
1,975,450	-		CCNA_01843	0.63	+0.0
1,975,461	+		CCNA_01843	0.64	-0.3
1,975,494	+		CCNA_01843	0.66	+0.6
1,975,494	+		CCNA_01843	0.66	+0.1
1,975,502	-		CCNA_01843	0.67	+0.3
1,975,502	-		CCNA_01843	0.67	+0.5
1,975,502	-		CCNA_01843	0.67	+1.2
1,975,554	+		CCNA_01843	0.70	-0.4
1,975,559	+		CCNA_01843	0.70	-1.5
1,975,562	-		CCNA_01843	0.70	-1.4
1,975,562	-		CCNA_01843	0.70	+0.5
1,975,574	+		CCNA_01843	0.71	+0.2
1,975,574	+		CCNA_01843	0.71	-0.6
1,975,650	+		CCNA_01843	0.76	-2.1
1,975,668	+		CCNA_01843	0.77	-0.1
1,975,688	+		CCNA_01843	0.78	-0.2
1,975,691	-		CCNA_01843	0.79	-0.8
1,975,696	-		CCNA_01843	0.79	+0.8
1,975,715	-		CCNA_01843	0.80	-1.7
1,975,729	+		CCNA_01843	0.81	-0.6
1,975,734	+		CCNA_01843	0.81	-0.2
1,975,734	+		CCNA_01843	0.81	-0.3
1,975,734	+		CCNA_01843	0.81	-1.1
1,975,747	-		CCNA_01843	0.82	-0.6
1,975,800	+		CCNA_01843	0.85	+0.1
1,975,824	-		CCNA_01843	0.87	+0.5
1,975,846	-		CCNA_01843	0.88	-1.1
1,975,851	-		CCNA_01843	0.89	+0.1
1,975,868	+		CCNA_01843	0.90	+1.2
1,975,868	+		CCNA_01843	0.90	+0.5
1,975,868	+		CCNA_01843	0.90	+0.0
1,975,868	+		CCNA_01843	0.90	-0.1
1,975,868	+		CCNA_01843	0.90	-0.5
1,975,868	+		CCNA_01843	0.90	+0.4
1,975,868	+		CCNA_01843	0.90	-0.1
1,975,876	-				+0.5
1,975,895	+				+2.2
1,975,903	-				-0.3
1,975,910	-				+0.2
1,975,936	+				+0.6
1,975,964	-				-2.5
1,975,985	+				+0.0
1,975,985	+				+0.1
1,975,985	+				-0.6
1,975,985	+				+0.2
1,975,993	-				-0.3
1,976,022	+				-1.1
1,976,025	-				+0.1
1,976,077	+				+0.5
1,976,087	+				-0.7
1,976,128	-				-0.5
1,976,145	+				-3.3
1,976,145	+				-0.7
1,976,153	-				-0.5
1,976,153	-				+0.7
1,976,153	-				-1.5
1,976,153	-				-0.4
1,976,155	+				+1.1
1,976,183	-				-0.7
1,976,199	-				+0.3
1,976,199	-				+0.1
1,976,231	+				-1.0
1,976,239	-				-0.8
1,976,239	-				+0.6
1,976,251	-		CCNA_01844	0.12	-0.1
1,976,251	-		CCNA_01844	0.12	+1.9
1,976,325	-		CCNA_01844	0.24	+0.2
1,976,356	+		CCNA_01844	0.29	-0.5
1,976,399	-		CCNA_01844	0.35	+0.9
1,976,400	-		CCNA_01844	0.36	-0.2
1,976,457	+		CCNA_01844	0.45	-1.3
1,976,476	+		CCNA_01844	0.48	-0.8
1,976,499	+		CCNA_01844	0.51	-1.2
1,976,508	+		CCNA_01844	0.53	-2.5
1,976,541	+		CCNA_01844	0.58	-0.5
1,976,549	-		CCNA_01844	0.59	-1.2
1,976,595	-		CCNA_01844	0.67	-0.4
1,976,618	+		CCNA_01844	0.70	-1.5
1,976,625	+		CCNA_01844	0.71	-2.0
1,976,633	-		CCNA_01844	0.73	-2.4
1,976,633	-		CCNA_01844	0.73	-0.9
1,976,633	-		CCNA_01844	0.73	-0.2
1,976,676	+		CCNA_01844	0.80	-1.7
1,976,685	+		CCNA_01844	0.81	-1.4
1,976,693	-		CCNA_01844	0.82	-2.3
1,976,723	+		CCNA_01844	0.87	+1.2
1,976,777	-				-1.1
1,976,811	-				+0.1
1,976,834	+				+1.3
1,976,849	+				-1.2
1,976,849	+				-1.8
1,976,849	-				+0.1
1,976,857	-				+1.5
1,976,872	-				+0.5
1,976,901	+				-0.7
1,976,929	+				+1.1
1,976,966	+				-0.5
1,977,044	+				+0.1
1,977,077	-				-0.5
1,977,084	+				-0.5
1,977,131	+				+0.5
1,977,139	-				-0.6
1,977,174	+		CCNA_01845	0.16	+0.3
1,977,182	-		CCNA_01845	0.18	-0.3
1,977,279	+		CCNA_01845	0.36	-0.1
1,977,302	-		CCNA_01845	0.40	-0.6
1,977,321	-		CCNA_01845	0.44	-0.1
1,977,384	-		CCNA_01845	0.56	-1.9
1,977,389	-		CCNA_01845	0.57	-0.1
1,977,402	+		CCNA_01845	0.59	+1.1
1,977,410	-		CCNA_01845	0.61	-1.3
1,977,433	-		CCNA_01845	0.65	-0.4
1,977,448	+		CCNA_01845	0.68	+0.3
1,977,448	+		CCNA_01845	0.68	+1.2
1,977,495	+		CCNA_01845	0.77	-0.1
1,977,503	-		CCNA_01845	0.78	+1.0
1,977,519	-		CCNA_01845	0.81	+0.4
1,977,628	+				-0.3
1,977,628	+				+1.1
1,977,660	-				-0.7
1,977,745	-				+0.3
1,977,745	-				-0.8
1,977,767	-		CCNA_01846	0.12	+0.6
1,977,767	-		CCNA_01846	0.12	-0.5
1,977,771	+		CCNA_01846	0.12	-1.5
1,977,772	+		CCNA_01846	0.12	+0.4
1,977,779	-		CCNA_01846	0.12	+0.8
1,977,792	+		CCNA_01846	0.13	-0.3