Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01240

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,364,928	-		CCNA_01239	0.32	-1.2
1,364,928	-		CCNA_01239	0.32	-1.6
1,364,937	-		CCNA_01239	0.32	-0.0
1,364,939	+		CCNA_01239	0.32	+0.6
1,364,939	+		CCNA_01239	0.32	+0.6
1,364,939	+		CCNA_01239	0.32	+0.0
1,364,947	-		CCNA_01239	0.33	-0.8
1,365,045	+		CCNA_01239	0.40	-1.7
1,365,045	+		CCNA_01239	0.40	-0.9
1,365,055	+		CCNA_01239	0.40	-1.2
1,365,089	+		CCNA_01239	0.43	-0.9
1,365,089	+		CCNA_01239	0.43	+0.0
1,365,089	+		CCNA_01239	0.43	-0.9
1,365,097	-		CCNA_01239	0.43	-0.1
1,365,097	-		CCNA_01239	0.43	+1.4
1,365,097	-		CCNA_01239	0.43	+0.9
1,365,121	-		CCNA_01239	0.45	-0.5
1,365,152	-		CCNA_01239	0.47	-0.2
1,365,162	-		CCNA_01239	0.48	+0.4
1,365,271	-		CCNA_01239	0.56	+0.3
1,365,345	-		CCNA_01239	0.61	-0.7
1,365,390	+		CCNA_01239	0.64	-0.4
1,365,407	+		CCNA_01239	0.65	+0.8
1,365,427	+		CCNA_01239	0.67	-0.9
1,365,428	-		CCNA_01239	0.67	+0.6
1,365,435	-		CCNA_01239	0.67	+0.9
1,365,526	+		CCNA_01239	0.73	+0.2
1,365,614	+		CCNA_01239	0.80	+1.4
1,365,615	+		CCNA_01239	0.80	-0.6
1,365,619	+		CCNA_01239	0.80	-1.3
1,365,660	+		CCNA_01239	0.83	-0.2
1,365,668	-		CCNA_01239	0.83	+1.1
1,365,668	-		CCNA_01239	0.83	+0.3
1,365,680	+		CCNA_01239	0.84	-0.5
1,365,702	+		CCNA_01239	0.86	+1.4
1,365,736	+		CCNA_01239	0.88	+1.3
1,365,741	+		CCNA_01239	0.89	-0.5
1,365,799	+				-0.1
1,365,898	+				-2.5
1,365,898	+				-0.3
1,365,900	+				-0.4
1,365,900	+				-0.1
1,365,908	-				+0.0
1,365,908	-				+0.2
1,365,919	-				+0.8
1,365,953	+				-0.2
1,365,961	-				+0.2
1,365,961	-				+0.7
1,365,961	-				+0.3
1,366,042	+		CCNA_01240	0.18	+0.6
1,366,109	-		CCNA_01240	0.27	-0.2
1,366,130	+		CCNA_01240	0.30	-0.9
1,366,155	+		CCNA_01240	0.33	-0.1
1,366,163	-		CCNA_01240	0.34	+0.2
1,366,213	+		CCNA_01240	0.41	-0.9
1,366,221	-		CCNA_01240	0.42	+0.9
1,366,245	+		CCNA_01240	0.45	-1.0
1,366,266	-		CCNA_01240	0.48	+0.9
1,366,279	+		CCNA_01240	0.49	+0.3
1,366,279	+		CCNA_01240	0.49	-0.1
1,366,287	-		CCNA_01240	0.50	+0.4
1,366,306	-		CCNA_01240	0.53	+0.0
1,366,306	-		CCNA_01240	0.53	+0.5
1,366,312	-		CCNA_01240	0.54	-0.1
1,366,332	+		CCNA_01240	0.56	+1.0
1,366,332	+		CCNA_01240	0.56	-0.1
1,366,333	+		CCNA_01240	0.56	+0.9
1,366,340	-		CCNA_01240	0.57	-2.0
1,366,340	-		CCNA_01240	0.57	-0.1
1,366,387	+		CCNA_01240	0.64	-0.2
1,366,403	-		CCNA_01240	0.66	+0.4
1,366,435	+		CCNA_01240	0.70	-1.1
1,366,457	-		CCNA_01240	0.73	+0.3
1,366,523	+		CCNA_01240	0.81	+0.5
1,366,563	-		CCNA_01240	0.87	+0.6
1,366,625	+				-1.3
1,366,691	-				+0.6
1,366,727	-				+1.3
1,366,729	+				+1.3
1,366,744	+				+0.3
1,366,752	-				+0.5
1,366,752	-				-0.7
1,366,757	-				+0.4
1,366,797	-				-1.0
1,366,870	+		CCNA_01241	0.16	+0.2
1,366,913	+		CCNA_01241	0.22	+1.0
1,366,921	-		CCNA_01241	0.23	+0.1
1,366,928	-		CCNA_01241	0.24	-1.2
1,366,928	-		CCNA_01241	0.24	-0.1
1,366,952	-		CCNA_01241	0.27	+0.3
1,366,963	+		CCNA_01241	0.29	+0.3
1,366,993	+		CCNA_01241	0.33	+0.1
1,366,996	-		CCNA_01241	0.33	+0.5
1,367,013	+		CCNA_01241	0.36	+0.1
1,367,038	-		CCNA_01241	0.39	+2.1
1,367,043	-		CCNA_01241	0.40	+0.5
1,367,061	+		CCNA_01241	0.43	+0.2
1,367,061	+		CCNA_01241	0.43	+0.3
1,367,061	+		CCNA_01241	0.43	-0.6
1,367,078	+		CCNA_01241	0.45	+0.5
1,367,079	-		CCNA_01241	0.45	+1.2
1,367,092	-		CCNA_01241	0.47	-0.7
1,367,094	+		CCNA_01241	0.47	-0.5
1,367,094	+		CCNA_01241	0.47	+1.6
1,367,094	+		CCNA_01241	0.47	+0.5
1,367,094	+		CCNA_01241	0.47	+0.3
1,367,094	+		CCNA_01241	0.47	+0.5
1,367,102	-		CCNA_01241	0.48	-1.4
1,367,102	-		CCNA_01241	0.48	+0.3
1,367,102	-		CCNA_01241	0.48	+0.5
1,367,102	-		CCNA_01241	0.48	+0.8
1,367,102	-		CCNA_01241	0.48	+0.2
1,367,170	-		CCNA_01241	0.58	+0.5
1,367,170	-		CCNA_01241	0.58	+1.8
1,367,195	+		CCNA_01241	0.61	-0.0
1,367,195	+		CCNA_01241	0.61	+0.1
1,367,195	+		CCNA_01241	0.61	+0.3
1,367,195	+		CCNA_01241	0.61	+1.2
1,367,195	+		CCNA_01241	0.61	+0.9
1,367,195	+		CCNA_01241	0.61	+1.1
1,367,195	+		CCNA_01241	0.61	+0.0
1,367,195	+		CCNA_01241	0.61	-1.3
1,367,203	-		CCNA_01241	0.62	+1.7
1,367,203	-		CCNA_01241	0.62	-0.0
1,367,203	-		CCNA_01241	0.62	+0.6
1,367,203	-		CCNA_01241	0.62	+0.8
1,367,203	-		CCNA_01241	0.62	+1.0
1,367,210	+		CCNA_01241	0.63	-0.2
1,367,269	+		CCNA_01241	0.72	+0.3
1,367,272	-		CCNA_01241	0.72	+0.2
1,367,283	+		CCNA_01241	0.74	+0.3
1,367,311	+		CCNA_01241	0.77	+0.2
1,367,311	+		CCNA_01241	0.77	-0.7
1,367,311	+		CCNA_01241	0.77	+0.5
1,367,333	+		CCNA_01241	0.80	-0.1
1,367,341	-		CCNA_01241	0.82	-0.4
1,367,413	+				-0.4
1,367,413	+				-0.6
1,367,413	+				+1.0
1,367,421	-				+0.9
1,367,434	-				+0.3
1,367,469	-				+1.0
1,367,469	-				+0.6
1,367,469	-				-1.9
1,367,478	+				+1.6
1,367,486	-				+0.1
1,367,580	-				+0.3
1,367,580	-				-0.0