Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01210

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,335,915	+		CCNA_01209	0.37	-1.0
1,335,923	-		CCNA_01209	0.38	+1.0
1,335,938	+		CCNA_01209	0.39	+0.9
1,335,938	+		CCNA_01209	0.39	-0.4
1,335,940	-		CCNA_01209	0.39	+0.1
1,335,950	+		CCNA_01209	0.40	+0.4
1,335,986	-		CCNA_01209	0.43	-0.9
1,336,005	-		CCNA_01209	0.45	-0.1
1,336,010	-		CCNA_01209	0.45	+0.3
1,336,036	-		CCNA_01209	0.48	-0.1
1,336,036	-		CCNA_01209	0.48	+0.5
1,336,053	+		CCNA_01209	0.49	-0.3
1,336,114	+		CCNA_01209	0.54	-0.2
1,336,122	-		CCNA_01209	0.55	-0.9
1,336,143	-		CCNA_01209	0.57	-0.7
1,336,151	-		CCNA_01209	0.58	-2.3
1,336,166	+		CCNA_01209	0.59	-2.2
1,336,233	+		CCNA_01209	0.65	-0.3
1,336,268	-		CCNA_01209	0.68	+0.1
1,336,309	-		CCNA_01209	0.71	-0.2
1,336,338	+		CCNA_01209	0.74	-0.1
1,336,341	-		CCNA_01209	0.74	+0.1
1,336,358	-		CCNA_01209	0.76	-0.8
1,336,428	-		CCNA_01209	0.82	+0.5
1,336,462	+		CCNA_01209	0.85	+1.2
1,336,476	+		CCNA_01209	0.86	-0.5
1,336,477	+		CCNA_01209	0.86	-0.1
1,336,484	+		CCNA_01209	0.87	+0.8
1,336,485	-		CCNA_01209	0.87	-1.3
1,336,492	-		CCNA_01209	0.87	+0.3
1,336,553	-				-1.2
1,336,564	+				-0.5
1,336,564	+				+0.3
1,336,564	+				-0.2
1,336,564	+				-0.1
1,336,564	+				-0.7
1,336,572	-				+1.0
1,336,572	-				-0.1
1,336,572	-				+0.7
1,336,572	-				+0.0
1,336,572	-				+0.5
1,336,572	-				-2.0
1,336,609	-				-0.3
1,336,611	+				+0.3
1,336,633	+				-0.1
1,336,633	+				+0.9
1,336,633	+				+0.5
1,336,633	+				-0.1
1,336,633	+				+0.6
1,336,633	+				+0.2
1,336,633	+				+1.9
1,336,633	+				-1.0
1,336,641	-				-0.6
1,336,641	-				-0.8
1,336,641	-				+0.6
1,336,641	-				-0.4
1,336,641	-				-1.1
1,336,641	-				+0.1
1,336,641	-				-0.6
1,336,729	+				+1.1
1,336,737	-				-0.1
1,336,737	-				-0.5
1,336,756	-				+0.2
1,336,774	+				-0.6
1,336,784	-				+0.9
1,336,842	-				-0.9
1,336,859	+				+0.5
1,336,880	+				-1.4
1,336,888	-				-3.3
1,336,897	+				-1.9
1,336,905	-				-0.7
1,336,905	-				-1.0
1,336,941	+		CCNA_01210	0.10	-1.1
1,336,942	-		CCNA_01210	0.10	-2.8
1,337,028	-		CCNA_01210	0.22	-1.3
1,337,032	+		CCNA_01210	0.22	-2.5
1,337,055	+		CCNA_01210	0.25	-0.6
1,337,090	-		CCNA_01210	0.30	-0.6
1,337,101	+		CCNA_01210	0.31	-0.5
1,337,103	+		CCNA_01210	0.31	-2.7
1,337,103	+		CCNA_01210	0.31	-0.3
1,337,103	+		CCNA_01210	0.31	+0.9
1,337,103	+		CCNA_01210	0.31	-1.3
1,337,111	-		CCNA_01210	0.32	-1.9
1,337,111	-		CCNA_01210	0.32	-0.6
1,337,195	+		CCNA_01210	0.43	-0.7
1,337,240	-		CCNA_01210	0.49	-2.6
1,337,308	-		CCNA_01210	0.58	+0.9
1,337,315	-		CCNA_01210	0.59	-0.3
1,337,354	-		CCNA_01210	0.64	-3.2
1,337,396	+		CCNA_01210	0.70	-0.9
1,337,396	-		CCNA_01210	0.70	-1.5
1,337,423	+		CCNA_01210	0.73	-0.4
1,337,431	-		CCNA_01210	0.74	-3.5
1,337,452	+		CCNA_01210	0.77	-2.0
1,337,452	+		CCNA_01210	0.77	-2.0
1,337,460	-		CCNA_01210	0.78	-2.0
1,337,530	+		CCNA_01210	0.87	-1.8
1,337,538	-		CCNA_01210	0.88	-1.8
1,337,538	-		CCNA_01210	0.88	-2.7
1,337,538	-		CCNA_01210	0.88	-1.1
1,337,545	+		CCNA_01210	0.89	-1.4
1,337,577	-				-0.7
1,337,610	+				+0.5
1,337,610	-				-0.5
1,337,626	+				+1.6
1,337,642	+				+0.4
1,337,642	+				+0.1
1,337,707	+				+0.8
1,337,905	+		CCNA_01211	0.13	-2.0
1,337,905	-		CCNA_01211	0.13	-0.7
1,337,923	+		CCNA_01211	0.16	-2.3
1,337,941	+		CCNA_01211	0.18	-0.9
1,337,945	+		CCNA_01211	0.18	+0.3
1,337,985	+		CCNA_01211	0.23	-3.4
1,338,010	+		CCNA_01211	0.25	-0.4
1,338,149	-		CCNA_01211	0.41	-2.3
1,338,225	-		CCNA_01211	0.50	-0.4
1,338,229	-		CCNA_01211	0.50	+0.1
1,338,230	-		CCNA_01211	0.51	-2.4
1,338,230	-		CCNA_01211	0.51	-0.3
1,338,249	-		CCNA_01211	0.53	-1.0
1,338,344	-		CCNA_01211	0.64	-2.0
1,338,349	-		CCNA_01211	0.64	+0.3
1,338,370	+		CCNA_01211	0.67	-0.3
1,338,479	-		CCNA_01211	0.79	-0.1
1,338,503	-		CCNA_01211	0.82	-2.2
1,338,559	+		CCNA_01211	0.88	-1.0
1,338,582	-				+0.2
1,338,594	+				-1.1
1,338,594	+				-2.3
1,338,602	-				-2.2
1,338,602	-				-1.5
1,338,602	-				-2.5
1,338,602	-				-2.1
1,338,602	-				-1.6
1,338,602	-				-2.7