Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01051

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,147,370	+		CCNA_01050	0.67	+0.2
1,147,409	-		CCNA_01050	0.69	-1.2
1,147,410	+		CCNA_01050	0.69	+0.0
1,147,414	-		CCNA_01050	0.69	+0.8
1,147,419	-		CCNA_01050	0.70	-0.9
1,147,439	+		CCNA_01050	0.71	-0.1
1,147,464	+		CCNA_01050	0.72	+1.0
1,147,472	-		CCNA_01050	0.73	-0.1
1,147,472	-		CCNA_01050	0.73	+1.0
1,147,472	-		CCNA_01050	0.73	-0.0
1,147,487	+		CCNA_01050	0.74	+0.7
1,147,534	+		CCNA_01050	0.77	+0.5
1,147,542	-		CCNA_01050	0.77	-0.5
1,147,553	+		CCNA_01050	0.78	+0.6
1,147,604	-		CCNA_01050	0.81	-1.4
1,147,656	-		CCNA_01050	0.84	+0.1
1,147,914	-				-0.6
1,147,915	+				+0.5
1,147,925	+				-0.8
1,147,926	+				+1.8
1,147,926	+				+0.4
1,147,934	-				+0.5
1,147,950	+				-1.0
1,147,958	+				-2.1
1,147,958	-				+0.5
1,147,966	-				+0.4
1,148,004	+				+1.0
1,148,012	-				+0.4
1,148,133	+				+0.9
1,148,264	+				+0.9
1,148,425	-				+0.0
1,148,430	+				-0.3
1,148,435	+				+0.5
1,148,468	+				-1.1
1,148,517	+				-0.6
1,148,527	+				+0.9
1,148,583	-				+0.4
1,148,583	-				-0.5
1,148,655	+				-0.0
1,148,656	+				-0.4
1,148,681	+		CCNA_01051	0.10	-0.5
1,148,745	-		CCNA_01051	0.12	-0.0
1,148,752	+		CCNA_01051	0.13	+0.1
1,148,831	+		CCNA_01051	0.15	-0.0
1,148,831	-		CCNA_01051	0.15	-0.0
1,148,833	+		CCNA_01051	0.15	+1.0
1,148,841	-		CCNA_01051	0.16	-1.2
1,148,841	-		CCNA_01051	0.16	+0.5
1,148,841	-		CCNA_01051	0.16	-0.5
1,148,841	-		CCNA_01051	0.16	-0.1
1,148,862	-		CCNA_01051	0.16	+1.0
1,148,952	+		CCNA_01051	0.19	+0.7
1,148,957	+		CCNA_01051	0.19	+0.1
1,148,960	-		CCNA_01051	0.19	+0.5
1,148,979	-		CCNA_01051	0.20	-0.8
1,148,997	+		CCNA_01051	0.21	-0.9
1,149,025	+		CCNA_01051	0.21	-0.0
1,149,030	+		CCNA_01051	0.22	+0.2
1,149,032	+		CCNA_01051	0.22	-0.4
1,149,054	+		CCNA_01051	0.22	-0.8
1,149,072	-		CCNA_01051	0.23	-1.5
1,149,124	-		CCNA_01051	0.25	+0.5
1,149,135	+		CCNA_01051	0.25	-0.1
1,149,144	+		CCNA_01051	0.25	-0.7
1,149,162	+		CCNA_01051	0.26	+1.2
1,149,203	-		CCNA_01051	0.27	+0.1
1,149,203	-		CCNA_01051	0.27	-0.1
1,149,205	+		CCNA_01051	0.27	+0.6
1,149,212	+		CCNA_01051	0.28	+1.0
1,149,296	+		CCNA_01051	0.30	-0.5
1,149,301	+		CCNA_01051	0.30	-0.2
1,149,304	-		CCNA_01051	0.30	-0.0
1,149,311	+		CCNA_01051	0.31	+0.8
1,149,317	+		CCNA_01051	0.31	-0.4
1,149,325	-		CCNA_01051	0.31	+1.4
1,149,340	+		CCNA_01051	0.32	-0.3
1,149,346	-		CCNA_01051	0.32	-1.4
1,149,348	-		CCNA_01051	0.32	+0.5
1,149,360	+		CCNA_01051	0.32	-0.2
1,149,376	+		CCNA_01051	0.33	-0.8
1,149,384	-		CCNA_01051	0.33	-0.3
1,149,474	+		CCNA_01051	0.36	-0.5
1,149,481	+		CCNA_01051	0.36	-0.1
1,149,489	-		CCNA_01051	0.36	+0.0
1,149,502	-		CCNA_01051	0.37	-0.2
1,149,522	+		CCNA_01051	0.37	-0.4
1,149,522	+		CCNA_01051	0.37	+1.0
1,149,531	+		CCNA_01051	0.38	+0.5
1,149,532	-		CCNA_01051	0.38	-0.8
1,149,672	-		CCNA_01051	0.42	+0.2
1,149,688	-		CCNA_01051	0.43	+0.1
1,149,689	-		CCNA_01051	0.43	-0.7
1,149,701	+		CCNA_01051	0.43	-1.4
1,149,709	-		CCNA_01051	0.44	-2.2
1,149,709	-		CCNA_01051	0.44	-0.7
1,149,734	+		CCNA_01051	0.44	-0.6
1,149,756	+		CCNA_01051	0.45	+0.2
1,149,796	+		CCNA_01051	0.46	-0.7
1,149,804	-		CCNA_01051	0.47	-0.4
1,149,807	+		CCNA_01051	0.47	-0.9
1,149,823	+		CCNA_01051	0.47	+0.4
1,149,856	-		CCNA_01051	0.48	+0.4
1,149,865	-		CCNA_01051	0.49	-1.4
1,149,887	+		CCNA_01051	0.49	-0.0
1,149,887	+		CCNA_01051	0.49	-0.9
1,149,905	-		CCNA_01051	0.50	+0.3
1,149,927	+		CCNA_01051	0.51	-2.1
1,149,935	-		CCNA_01051	0.51	+0.8
1,149,944	-		CCNA_01051	0.51	-0.5
1,149,960	+		CCNA_01051	0.52	+0.2
1,149,960	+		CCNA_01051	0.52	-1.4
1,149,968	-		CCNA_01051	0.52	+0.3
1,149,968	-		CCNA_01051	0.52	-1.7
1,149,968	-		CCNA_01051	0.52	-1.3
1,149,968	-		CCNA_01051	0.52	+0.2
1,149,968	-		CCNA_01051	0.52	-0.4
1,149,995	+		CCNA_01051	0.53	+0.5
1,150,000	+		CCNA_01051	0.53	-0.7
1,150,000	+		CCNA_01051	0.53	-0.3
1,150,000	+		CCNA_01051	0.53	-0.8
1,150,008	-		CCNA_01051	0.53	+0.6
1,150,012	+		CCNA_01051	0.53	+0.2
1,150,019	+		CCNA_01051	0.53	+1.1
1,150,022	+		CCNA_01051	0.54	-1.8
1,150,056	+		CCNA_01051	0.55	-0.9
1,150,061	+		CCNA_01051	0.55	-0.5
1,150,080	-		CCNA_01051	0.55	-2.5
1,150,096	+		CCNA_01051	0.56	-0.4
1,150,096	+		CCNA_01051	0.56	-0.4
1,150,104	-		CCNA_01051	0.56	-1.0
1,150,114	+		CCNA_01051	0.57	-0.3
1,150,127	-		CCNA_01051	0.57	+0.6
1,150,127	-		CCNA_01051	0.57	+0.2
1,150,141	+		CCNA_01051	0.57	-1.6
1,150,157	+		CCNA_01051	0.58	-1.1
1,150,213	-		CCNA_01051	0.60	-1.5
1,150,318	-		CCNA_01051	0.63	+1.0
1,150,340	-		CCNA_01051	0.64	+0.6
1,150,378	+		CCNA_01051	0.65	+1.0
1,150,378	+		CCNA_01051	0.65	-1.4
1,150,387	-		CCNA_01051	0.65	-0.8
1,150,392	-		CCNA_01051	0.65	+0.8
1,150,404	+		CCNA_01051	0.66	-0.9
1,150,404	+		CCNA_01051	0.66	-1.0
1,150,416	+		CCNA_01051	0.66	+0.1
1,150,424	-		CCNA_01051	0.67	-0.1
1,150,451	+		CCNA_01051	0.67	-0.4
1,150,473	+		CCNA_01051	0.68	-0.3
1,150,490	-		CCNA_01051	0.69	+0.4
1,150,490	-		CCNA_01051	0.69	-0.7
1,150,523	-		CCNA_01051	0.70	+0.4
1,150,527	-		CCNA_01051	0.70	+0.1
1,150,547	-		CCNA_01051	0.70	+0.1
1,150,581	-		CCNA_01051	0.72	-1.2
1,150,597	+		CCNA_01051	0.72	-0.2
1,150,604	-		CCNA_01051	0.72	-1.1
1,150,604	-		CCNA_01051	0.72	+0.1
1,150,604	-		CCNA_01051	0.72	-0.7
1,150,613	+		CCNA_01051	0.73	-0.5
1,150,725	-		CCNA_01051	0.76	-2.1
1,150,749	-		CCNA_01051	0.77	+1.1
1,150,756	-		CCNA_01051	0.77	+0.3
1,150,758	+		CCNA_01051	0.77	-0.8
1,150,759	+		CCNA_01051	0.77	-0.7
1,150,759	+		CCNA_01051	0.77	-0.4
1,150,767	-		CCNA_01051	0.78	-0.4
1,150,793	-		CCNA_01051	0.78	-2.9
1,150,798	-		CCNA_01051	0.79	-1.0
1,150,808	-		CCNA_01051	0.79	-0.4
1,150,831	-		CCNA_01051	0.80	-0.9
1,150,836	-		CCNA_01051	0.80	-1.3
1,150,842	-		CCNA_01051	0.80	+0.4
1,150,881	-		CCNA_01051	0.81	+0.6
1,150,948	+		CCNA_01051	0.83	+0.2
1,150,961	-		CCNA_01051	0.84	-0.1
1,151,012	+		CCNA_01051	0.85	+0.0
1,151,041	-		CCNA_01051	0.86	+0.9
1,151,063	+		CCNA_01051	0.87	+0.2
1,151,102	+		CCNA_01051	0.88	-0.2
1,151,152	-		CCNA_01051	0.90	-1.2
1,151,159	+				-0.1
1,151,163	-				+0.1
1,151,164	+				-0.1
1,151,174	+				+1.6
1,151,174	+				-0.5
1,151,214	+				+0.5
1,151,221	-				+0.2
1,151,248	+				-0.4
1,151,251	-				-2.8
1,151,272	+				-0.8
1,151,272	+				-0.0
1,151,272	+				+0.2
1,151,272	+				+2.0
1,151,272	+				+0.1
1,151,272	+				+0.1
1,151,277	+				+0.1
1,151,277	+				+1.1
1,151,277	+				+0.5
1,151,280	-				+0.3
1,151,280	-				-0.6
1,151,280	-				-0.5
1,151,280	-				+0.3
1,151,280	-				-0.7
1,151,280	-				-0.2
1,151,280	-				+0.5
1,151,280	-				+0.3
1,151,280	-				-0.7
1,151,280	-				+0.9
1,151,280	-				-0.7
1,151,280	-				-2.5
1,151,280	-				+0.1
1,151,285	-				-1.2
1,151,285	-				+0.3
1,151,314	-				+0.0
1,151,321	-				-0.0
1,151,360	-				-0.4
1,151,360	-				-1.1
1,151,360	-				-0.3
1,151,365	-				-1.9
1,151,367	+				-0.0
1,151,420	+				-0.2
1,151,509	+				-0.3
1,151,532	+				+0.2
1,151,566	+				-1.2
1,151,566	-				-0.2
1,151,593	-				+0.5
1,151,633	+		CCNA_01052	0.11	-0.4
1,151,639	+		CCNA_01052	0.12	-1.0
1,151,647	-		CCNA_01052	0.13	+0.5
1,151,672	-		CCNA_01052	0.16	-0.9
1,151,672	-		CCNA_01052	0.16	+0.7
1,151,692	+		CCNA_01052	0.19	+0.1
1,151,777	+		CCNA_01052	0.31	-1.1
1,151,785	-		CCNA_01052	0.32	-0.4
1,151,789	-		CCNA_01052	0.33	-0.6
1,151,789	-		CCNA_01052	0.33	-2.0
1,151,817	+		CCNA_01052	0.36	-0.8
1,151,839	+		CCNA_01052	0.39	-0.2
1,151,885	-		CCNA_01052	0.46	+0.6
1,151,896	-		CCNA_01052	0.47	+0.5
1,151,908	+		CCNA_01052	0.49	+0.4
1,151,913	+		CCNA_01052	0.50	+0.7
1,151,916	-		CCNA_01052	0.50	+0.3
1,151,931	+		CCNA_01052	0.52	-2.1
1,151,949	+		CCNA_01052	0.55	-0.9
1,151,981	+		CCNA_01052	0.59	-0.0
1,151,983	-		CCNA_01052	0.59	-0.3
1,151,983	-		CCNA_01052	0.59	+1.5
1,151,988	-		CCNA_01052	0.60	+0.1
1,151,989	-		CCNA_01052	0.60	+0.3
1,152,001	+		CCNA_01052	0.62	-0.2
1,152,012	+		CCNA_01052	0.63	+0.5
1,152,041	+		CCNA_01052	0.67	-0.0
1,152,051	+		CCNA_01052	0.69	-0.2
1,152,120	-		CCNA_01052	0.78	-1.1
1,152,125	+		CCNA_01052	0.79	+0.5
1,152,135	+		CCNA_01052	0.80	+0.4
1,152,171	+		CCNA_01052	0.85	+0.6
1,152,171	+		CCNA_01052	0.85	-0.3
1,152,176	+		CCNA_01052	0.86	+0.2
1,152,177	+		CCNA_01052	0.86	-1.2
1,152,265	+				-0.0
1,152,361	+		CCNA_01053	0.14	-0.2
1,152,379	-		CCNA_01053	0.16	-0.8
1,152,379	-		CCNA_01053	0.16	-0.7
1,152,422	+		CCNA_01053	0.20	+0.3
1,152,436	-		CCNA_01053	0.21	-0.2