Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS19085

Experiment: 150_initial_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_initial_1
4,147,405	+				-0.9
4,147,405	+				+0.6
4,147,406	-				+0.2
4,147,458	-				-0.3
4,147,479	+				-0.5
4,147,480	-				+0.0
4,147,527	-				-0.1
4,147,569	-				+0.3
4,147,592	+				-0.8
4,147,623	+				-0.1
4,147,727	-				+0.6
4,147,871	+				-1.1
4,147,871	+				-1.9
4,147,871	+				-0.2
4,147,871	+				-0.5
4,147,871	+				-0.4
4,147,872	-				-0.2
4,147,872	-				+0.0
4,147,872	-				-0.9
4,147,875	+				-1.0
4,147,888	+				+0.2
4,147,892	+				-0.8
4,147,893	-				-1.3
4,147,943	+				+0.2
4,147,943	+				-0.6
4,147,943	+				-1.4
4,147,943	+				-0.2
4,147,943	+				-0.3
4,147,944	-				-0.3
4,147,944	-				-0.3
4,147,944	-				-0.7
4,147,960	+		AMB_RS19080	0.12	-0.6
4,147,960	+		AMB_RS19080	0.12	-0.6
4,147,961	-		AMB_RS19080	0.12	-0.2
4,147,982	+		AMB_RS19080	0.19	-1.6
4,147,982	+		AMB_RS19080	0.19	-0.4
4,147,983	-		AMB_RS19080	0.20	-0.4
4,148,021	+		AMB_RS19080	0.33	-0.4
4,148,021	+		AMB_RS19080	0.33	+0.0
4,148,021	+		AMB_RS19080	0.33	-0.7
4,148,022	-		AMB_RS19080	0.33	-0.3
4,148,022	-		AMB_RS19080	0.33	-0.4
4,148,022	-		AMB_RS19080	0.33	-0.7
4,148,022	-		AMB_RS19080	0.33	-0.7
4,148,022	-		AMB_RS19080	0.33	-0.1
4,148,226	+				-1.0
4,148,226	+				-0.9
4,148,226	+				+0.1
4,148,226	+				-0.3
4,148,226	+				-1.3
4,148,226	+				-0.2
4,148,227	-				-0.5
4,148,227	-				-0.4
4,148,227	-				-0.9
4,148,235	+				-1.1
4,148,236	-				-0.6
4,148,236	-				-2.1
4,148,306	+				-0.1
4,148,351	-				-0.2
4,148,351	-				-0.0
4,148,403	-				-0.2
4,148,419	-				-0.6
4,148,458	-		AMB_RS19085	0.12	-0.7
4,148,521	+		AMB_RS19085	0.23	+0.1
4,148,522	-		AMB_RS19085	0.23	-0.6
4,148,522	-		AMB_RS19085	0.23	+0.7
4,148,625	+		AMB_RS19085	0.42	-0.3
4,148,625	+		AMB_RS19085	0.42	-0.6
4,148,625	+		AMB_RS19085	0.42	-0.5
4,148,626	-		AMB_RS19085	0.42	-0.9
4,148,626	-		AMB_RS19085	0.42	-0.6
4,148,637	+		AMB_RS19085	0.44	+0.1
4,148,638	-		AMB_RS19085	0.45	-0.4
4,148,638	-		AMB_RS19085	0.45	-0.9
4,148,640	-		AMB_RS19085	0.45	-0.7
4,148,640	-		AMB_RS19085	0.45	+0.9
4,148,720	+		AMB_RS19085	0.60	-0.0
4,148,720	+		AMB_RS19085	0.60	-0.1
4,148,720	+		AMB_RS19085	0.60	-0.3
4,148,721	-		AMB_RS19085	0.60	-0.5
4,148,721	-		AMB_RS19085	0.60	-0.1
4,148,721	-		AMB_RS19085	0.60	-0.5
4,148,768	-		AMB_RS19085	0.68	-0.2
4,148,778	-		AMB_RS19085	0.70	-0.2
4,148,805	+		AMB_RS19085	0.75	-0.4
4,148,806	-		AMB_RS19085	0.75	+0.8
4,148,809	+		AMB_RS19085	0.76	+0.2
4,148,809	+		AMB_RS19085	0.76	+1.0
4,148,809	+		AMB_RS19085	0.76	+0.3
4,148,871	+		AMB_RS19085	0.87	+0.5
4,148,872	-		AMB_RS19085	0.87	-1.0
4,148,872	-		AMB_RS19085	0.87	+0.5
4,148,916	+				+1.5
4,148,917	-				+0.4
4,148,943	+				-1.5
4,148,943	+				-1.2
4,148,944	-				-1.0
4,148,954	+				-0.0
4,148,954	+				-0.1
4,148,954	+				-0.3
4,148,954	+				+0.5
4,148,955	-				-0.9
4,148,955	-				-0.5
4,148,955	-				+0.1
4,148,955	-				-1.2
4,148,972	+				+0.2
4,148,973	-				+0.1
4,148,973	-				-0.2
4,148,980	+				+0.3
4,148,980	+				+0.1
4,148,980	+				-0.3
4,148,981	-				+0.0
4,148,981	-				-0.4
4,149,014	+				-0.5
4,149,015	-				-0.6
4,149,015	-				-0.6
4,149,221	+		AMB_RS19090	0.17	-0.2
4,149,269	-		AMB_RS19090	0.19	-0.6
4,149,269	-		AMB_RS19090	0.19	-1.4
4,149,269	-		AMB_RS19090	0.19	-0.1
4,149,270	+		AMB_RS19090	0.20	-1.7
4,149,270	+		AMB_RS19090	0.20	-0.1
4,149,270	+		AMB_RS19090	0.20	+0.6
4,149,270	+		AMB_RS19090	0.20	+0.3
4,149,270	+		AMB_RS19090	0.20	+0.7
4,149,271	-		AMB_RS19090	0.20	+0.2
4,149,271	-		AMB_RS19090	0.20	+0.2
4,149,271	-		AMB_RS19090	0.20	-0.3
4,149,271	-		AMB_RS19090	0.20	+0.3
4,149,271	-		AMB_RS19090	0.20	+0.2
4,149,301	-		AMB_RS19090	0.21	-0.2
4,149,315	+		AMB_RS19090	0.22	-0.6
4,149,316	-		AMB_RS19090	0.22	-0.8
4,149,317	+		AMB_RS19090	0.22	+0.1
4,149,317	+		AMB_RS19090	0.22	+0.1
4,149,317	+		AMB_RS19090	0.22	+0.0
4,149,317	+		AMB_RS19090	0.22	-0.2
4,149,317	+		AMB_RS19090	0.22	-0.6
4,149,317	+		AMB_RS19090	0.22	+0.2
4,149,317	+		AMB_RS19090	0.22	+0.1
4,149,318	-		AMB_RS19090	0.22	+0.3
4,149,318	-		AMB_RS19090	0.22	-1.4
4,149,318	-		AMB_RS19090	0.22	-0.5
4,149,318	-		AMB_RS19090	0.22	-0.7
4,149,318	-		AMB_RS19090	0.22	-0.5
4,149,319	+		AMB_RS19090	0.22	+0.2
4,149,319	+		AMB_RS19090	0.22	-0.1
4,149,319	+		AMB_RS19090	0.22	+0.1
4,149,319	+		AMB_RS19090	0.22	-0.3
4,149,319	+		AMB_RS19090	0.22	-0.4
4,149,319	+		AMB_RS19090	0.22	+1.2
4,149,319	+		AMB_RS19090	0.22	-1.1
4,149,319	+		AMB_RS19090	0.22	+1.0
4,149,319	+		AMB_RS19090	0.22	-1.3
4,149,319	+		AMB_RS19090	0.22	-0.3
4,149,320	-		AMB_RS19090	0.22	-0.4
4,149,320	-		AMB_RS19090	0.22	+0.5
4,149,320	-		AMB_RS19090	0.22	-0.2
4,149,320	-		AMB_RS19090	0.22	-0.6
4,149,320	-		AMB_RS19090	0.22	-0.5
4,149,320	-		AMB_RS19090	0.22	-0.1
4,149,320	-		AMB_RS19090	0.22	-0.4
4,149,320	-		AMB_RS19090	0.22	+0.8
4,149,326	+		AMB_RS19090	0.23	-1.5
4,149,327	-		AMB_RS19090	0.23	-1.6
4,149,366	-		AMB_RS19090	0.25	-0.5
4,149,504	+		AMB_RS19090	0.33	-0.3
4,149,608	+		AMB_RS19090	0.39	+0.5
4,149,608	+		AMB_RS19090	0.39	-0.8
4,149,608	+		AMB_RS19090	0.39	-0.3
4,149,609	-		AMB_RS19090	0.39	-0.5
4,149,612	+		AMB_RS19090	0.40	-1.9
4,149,612	+		AMB_RS19090	0.40	+0.6
4,149,612	+		AMB_RS19090	0.40	-0.1
4,149,612	+		AMB_RS19090	0.40	-0.5
4,149,612	+		AMB_RS19090	0.40	-1.0
4,149,612	+		AMB_RS19090	0.40	+0.5
4,149,613	-		AMB_RS19090	0.40	-0.9
4,149,613	-		AMB_RS19090	0.40	-0.3
4,149,620	+		AMB_RS19090	0.40	-0.0
4,149,620	+		AMB_RS19090	0.40	-0.4
4,149,621	-		AMB_RS19090	0.40	-0.3
4,149,621	-		AMB_RS19090	0.40	+0.2
4,149,672	+		AMB_RS19090	0.43	+0.0
4,149,672	+		AMB_RS19090	0.43	-0.5
4,149,673	-		AMB_RS19090	0.43	-0.3
4,149,673	-		AMB_RS19090	0.43	-1.2
4,149,737	+		AMB_RS19090	0.47	-0.3
4,149,760	+		AMB_RS19090	0.48	-0.7
4,149,760	+		AMB_RS19090	0.48	-0.3
4,149,760	+		AMB_RS19090	0.48	-1.1
4,149,760	+		AMB_RS19090	0.48	-0.3
4,149,760	+		AMB_RS19090	0.48	-2.4
4,149,760	+		AMB_RS19090	0.48	-0.0
4,149,760	+		AMB_RS19090	0.48	-0.3
4,149,761	-		AMB_RS19090	0.48	+0.1
4,149,761	-		AMB_RS19090	0.48	-0.8
4,149,761	-		AMB_RS19090	0.48	-0.5
4,149,761	-		AMB_RS19090	0.48	-0.3
4,149,761	-		AMB_RS19090	0.48	-0.8
4,149,766	-		AMB_RS19090	0.49	-0.4
4,149,895	+		AMB_RS19090	0.56	-0.4
4,149,895	+		AMB_RS19090	0.56	+0.7
4,149,896	-		AMB_RS19090	0.56	-0.3
4,149,909	-		AMB_RS19090	0.57	+1.2
4,149,909	-		AMB_RS19090	0.57	-0.1
4,149,909	-		AMB_RS19090	0.57	-0.1
4,149,909	-		AMB_RS19090	0.57	-0.6