Strain Fitness in Bosea sp. OAE506 around ABIE41_RS03050

Experiment: D-Raffinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS03045 and ABIE41_RS03050 are separated by 223 nucleotidesABIE41_RS03050 and ABIE41_RS03055 are separated by 141 nucleotides ABIE41_RS03045: ABIE41_RS03045 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 633,840 to 634,994 _RS03045 ABIE41_RS03050: ABIE41_RS03050 - class I SAM-dependent methyltransferase, at 635,218 to 636,090 _RS03050 ABIE41_RS03055: ABIE41_RS03055 - phytanoyl-CoA dioxygenase family protein, at 636,232 to 637,044 _RS03055 Position (kb) 635 636 637Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 634.316 kb on + strand, within ABIE41_RS03045at 634.317 kb on - strand, within ABIE41_RS03045at 634.317 kb on - strand, within ABIE41_RS03045at 634.317 kb on - strand, within ABIE41_RS03045at 634.318 kb on + strand, within ABIE41_RS03045at 634.319 kb on - strand, within ABIE41_RS03045at 634.439 kb on + strand, within ABIE41_RS03045at 634.439 kb on + strand, within ABIE41_RS03045at 634.439 kb on + strand, within ABIE41_RS03045at 634.439 kb on + strand, within ABIE41_RS03045at 634.439 kb on + strand, within ABIE41_RS03045at 634.440 kb on - strand, within ABIE41_RS03045at 634.502 kb on + strand, within ABIE41_RS03045at 634.502 kb on + strand, within ABIE41_RS03045at 634.502 kb on + strand, within ABIE41_RS03045at 634.502 kb on + strand, within ABIE41_RS03045at 634.503 kb on - strand, within ABIE41_RS03045at 634.503 kb on - strand, within ABIE41_RS03045at 634.504 kb on + strand, within ABIE41_RS03045at 634.504 kb on + strand, within ABIE41_RS03045at 634.504 kb on + strand, within ABIE41_RS03045at 634.504 kb on + strand, within ABIE41_RS03045at 634.505 kb on - strand, within ABIE41_RS03045at 634.505 kb on - strand, within ABIE41_RS03045at 634.505 kb on - strand, within ABIE41_RS03045at 634.603 kb on + strand, within ABIE41_RS03045at 634.603 kb on + strand, within ABIE41_RS03045at 634.603 kb on + strand, within ABIE41_RS03045at 634.603 kb on + strand, within ABIE41_RS03045at 634.603 kb on + strand, within ABIE41_RS03045at 634.604 kb on - strand, within ABIE41_RS03045at 634.604 kb on - strand, within ABIE41_RS03045at 634.604 kb on - strand, within ABIE41_RS03045at 634.936 kb on - strandat 634.945 kb on - strandat 635.216 kb on + strandat 635.216 kb on + strandat 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.494 kb on + strand, within ABIE41_RS03050at 635.495 kb on - strand, within ABIE41_RS03050at 635.495 kb on - strand, within ABIE41_RS03050at 635.495 kb on - strand, within ABIE41_RS03050at 635.495 kb on - strand, within ABIE41_RS03050at 635.554 kb on + strand, within ABIE41_RS03050at 635.554 kb on + strand, within ABIE41_RS03050at 635.554 kb on + strand, within ABIE41_RS03050at 635.554 kb on + strand, within ABIE41_RS03050at 635.555 kb on - strand, within ABIE41_RS03050at 635.555 kb on - strand, within ABIE41_RS03050at 635.555 kb on - strand, within ABIE41_RS03050at 635.555 kb on - strand, within ABIE41_RS03050at 635.555 kb on - strand, within ABIE41_RS03050at 635.555 kb on - strand, within ABIE41_RS03050at 635.572 kb on + strand, within ABIE41_RS03050at 635.630 kb on + strand, within ABIE41_RS03050at 635.630 kb on + strand, within ABIE41_RS03050at 635.630 kb on + strand, within ABIE41_RS03050at 635.630 kb on + strand, within ABIE41_RS03050at 635.631 kb on - strand, within ABIE41_RS03050at 635.631 kb on - strand, within ABIE41_RS03050at 635.815 kb on + strand, within ABIE41_RS03050at 635.816 kb on - strand, within ABIE41_RS03050at 636.000 kb on + strand, within ABIE41_RS03050at 636.000 kb on + strand, within ABIE41_RS03050at 636.000 kb on + strand, within ABIE41_RS03050at 636.000 kb on + strand, within ABIE41_RS03050at 636.001 kb on - strand, within ABIE41_RS03050at 636.001 kb on - strand, within ABIE41_RS03050at 636.001 kb on - strand, within ABIE41_RS03050at 636.001 kb on - strand, within ABIE41_RS03050at 636.153 kb on + strandat 636.153 kb on + strandat 636.154 kb on - strandat 636.154 kb on - strandat 636.154 kb on - strandat 636.334 kb on + strand, within ABIE41_RS03055at 636.334 kb on + strand, within ABIE41_RS03055at 636.335 kb on - strand, within ABIE41_RS03055at 636.335 kb on - strand, within ABIE41_RS03055at 636.335 kb on - strand, within ABIE41_RS03055at 636.335 kb on - strand, within ABIE41_RS03055at 636.335 kb on - strand, within ABIE41_RS03055at 636.355 kb on + strand, within ABIE41_RS03055at 636.356 kb on - strand, within ABIE41_RS03055at 636.454 kb on + strand, within ABIE41_RS03055at 636.610 kb on + strand, within ABIE41_RS03055at 636.610 kb on + strand, within ABIE41_RS03055at 636.610 kb on + strand, within ABIE41_RS03055at 636.610 kb on + strand, within ABIE41_RS03055at 636.610 kb on + strand, within ABIE41_RS03055at 636.611 kb on - strand, within ABIE41_RS03055at 636.611 kb on - strand, within ABIE41_RS03055at 636.625 kb on + strand, within ABIE41_RS03055at 636.625 kb on + strand, within ABIE41_RS03055at 636.625 kb on + strand, within ABIE41_RS03055at 636.625 kb on + strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.626 kb on - strand, within ABIE41_RS03055at 636.643 kb on + strand, within ABIE41_RS03055at 636.644 kb on - strand, within ABIE41_RS03055at 636.844 kb on + strand, within ABIE41_RS03055at 636.844 kb on + strand, within ABIE41_RS03055at 636.844 kb on + strand, within ABIE41_RS03055at 636.844 kb on + strand, within ABIE41_RS03055at 636.844 kb on + strand, within ABIE41_RS03055at 636.844 kb on + strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.845 kb on - strand, within ABIE41_RS03055at 636.902 kb on - strand, within ABIE41_RS03055at 637.028 kb on - strandat 637.030 kb on + strandat 637.030 kb on + strandat 637.030 kb on + strandat 637.088 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Raffinose (C)
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634,316 + ABIE41_RS03045 0.41 +2.1
634,317 - ABIE41_RS03045 0.41 +1.2
634,317 - ABIE41_RS03045 0.41 +1.1
634,317 - ABIE41_RS03045 0.41 +1.2
634,318 + ABIE41_RS03045 0.41 +0.1
634,319 - ABIE41_RS03045 0.41 +1.3
634,439 + ABIE41_RS03045 0.52 +1.2
634,439 + ABIE41_RS03045 0.52 +1.4
634,439 + ABIE41_RS03045 0.52 -0.9
634,439 + ABIE41_RS03045 0.52 -2.3
634,439 + ABIE41_RS03045 0.52 +2.9
634,440 - ABIE41_RS03045 0.52 -0.9
634,502 + ABIE41_RS03045 0.57 +1.1
634,502 + ABIE41_RS03045 0.57 +1.3
634,502 + ABIE41_RS03045 0.57 +0.1
634,502 + ABIE41_RS03045 0.57 -1.4
634,503 - ABIE41_RS03045 0.57 +1.1
634,503 - ABIE41_RS03045 0.57 +1.7
634,504 + ABIE41_RS03045 0.57 +1.0
634,504 + ABIE41_RS03045 0.57 -0.9
634,504 + ABIE41_RS03045 0.57 +0.1
634,504 + ABIE41_RS03045 0.57 +2.7
634,505 - ABIE41_RS03045 0.58 +1.0
634,505 - ABIE41_RS03045 0.58 +0.9
634,505 - ABIE41_RS03045 0.58 +1.3
634,603 + ABIE41_RS03045 0.66 +0.9
634,603 + ABIE41_RS03045 0.66 +0.7
634,603 + ABIE41_RS03045 0.66 +1.4
634,603 + ABIE41_RS03045 0.66 +1.0
634,603 + ABIE41_RS03045 0.66 +1.8
634,604 - ABIE41_RS03045 0.66 +1.6
634,604 - ABIE41_RS03045 0.66 +1.1
634,604 - ABIE41_RS03045 0.66 +3.2
634,936 - +0.2
634,945 - +1.2
635,216 + +0.1
635,216 + +1.3
635,494 + ABIE41_RS03050 0.32 -0.5
635,494 + ABIE41_RS03050 0.32 -2.6
635,494 + ABIE41_RS03050 0.32 +1.2
635,494 + ABIE41_RS03050 0.32 +1.9
635,494 + ABIE41_RS03050 0.32 +0.3
635,494 + ABIE41_RS03050 0.32 +2.2
635,494 + ABIE41_RS03050 0.32 -1.1
635,494 + ABIE41_RS03050 0.32 +2.6
635,494 + ABIE41_RS03050 0.32 +0.1
635,495 - ABIE41_RS03050 0.32 +0.2
635,495 - ABIE41_RS03050 0.32 -0.7
635,495 - ABIE41_RS03050 0.32 +0.3
635,495 - ABIE41_RS03050 0.32 +0.8
635,554 + ABIE41_RS03050 0.38 +0.2
635,554 + ABIE41_RS03050 0.38 +0.2
635,554 + ABIE41_RS03050 0.38 +2.2
635,554 + ABIE41_RS03050 0.38 -0.2
635,555 - ABIE41_RS03050 0.39 +2.1
635,555 - ABIE41_RS03050 0.39 +0.6
635,555 - ABIE41_RS03050 0.39 +2.1
635,555 - ABIE41_RS03050 0.39 -2.6
635,555 - ABIE41_RS03050 0.39 -1.4
635,555 - ABIE41_RS03050 0.39 +0.4
635,572 + ABIE41_RS03050 0.41 +2.9
635,630 + ABIE41_RS03050 0.47 +0.9
635,630 + ABIE41_RS03050 0.47 -1.3
635,630 + ABIE41_RS03050 0.47 -2.1
635,630 + ABIE41_RS03050 0.47 -0.4
635,631 - ABIE41_RS03050 0.47 +1.0
635,631 - ABIE41_RS03050 0.47 +0.2
635,815 + ABIE41_RS03050 0.68 +1.1
635,816 - ABIE41_RS03050 0.68 +0.6
636,000 + ABIE41_RS03050 0.90 +0.8
636,000 + ABIE41_RS03050 0.90 +0.8
636,000 + ABIE41_RS03050 0.90 +1.1
636,000 + ABIE41_RS03050 0.90 +1.3
636,001 - ABIE41_RS03050 0.90 +1.0
636,001 - ABIE41_RS03050 0.90 +1.0
636,001 - ABIE41_RS03050 0.90 -2.3
636,001 - ABIE41_RS03050 0.90 +0.4
636,153 + +0.7
636,153 + +0.3
636,154 - +1.3
636,154 - +1.0
636,154 - +1.3
636,334 + ABIE41_RS03055 0.13 +0.6
636,334 + ABIE41_RS03055 0.13 +1.0
636,335 - ABIE41_RS03055 0.13 +1.1
636,335 - ABIE41_RS03055 0.13 +1.1
636,335 - ABIE41_RS03055 0.13 -0.4
636,335 - ABIE41_RS03055 0.13 -2.0
636,335 - ABIE41_RS03055 0.13 +1.0
636,355 + ABIE41_RS03055 0.15 +0.8
636,356 - ABIE41_RS03055 0.15 +1.4
636,454 + ABIE41_RS03055 0.27 +1.3
636,610 + ABIE41_RS03055 0.46 -0.5
636,610 + ABIE41_RS03055 0.46 -1.4
636,610 + ABIE41_RS03055 0.46 -0.4
636,610 + ABIE41_RS03055 0.46 +0.6
636,610 + ABIE41_RS03055 0.46 +0.7
636,611 - ABIE41_RS03055 0.47 -1.0
636,611 - ABIE41_RS03055 0.47 +1.3
636,625 + ABIE41_RS03055 0.48 +0.9
636,625 + ABIE41_RS03055 0.48 +2.4
636,625 + ABIE41_RS03055 0.48 +0.9
636,625 + ABIE41_RS03055 0.48 +1.2
636,626 - ABIE41_RS03055 0.48 +1.1
636,626 - ABIE41_RS03055 0.48 -0.9
636,626 - ABIE41_RS03055 0.48 +4.5
636,626 - ABIE41_RS03055 0.48 +1.9
636,626 - ABIE41_RS03055 0.48 +0.7
636,626 - ABIE41_RS03055 0.48 +0.7
636,626 - ABIE41_RS03055 0.48 +0.9
636,626 - ABIE41_RS03055 0.48 +1.9
636,626 - ABIE41_RS03055 0.48 +1.0
636,643 + ABIE41_RS03055 0.51 -2.0
636,644 - ABIE41_RS03055 0.51 +0.8
636,844 + ABIE41_RS03055 0.75 -3.4
636,844 + ABIE41_RS03055 0.75 +2.2
636,844 + ABIE41_RS03055 0.75 +2.5
636,844 + ABIE41_RS03055 0.75 +0.4
636,844 + ABIE41_RS03055 0.75 +0.7
636,844 + ABIE41_RS03055 0.75 +1.7
636,845 - ABIE41_RS03055 0.75 -1.1
636,845 - ABIE41_RS03055 0.75 +1.2
636,845 - ABIE41_RS03055 0.75 -0.3
636,845 - ABIE41_RS03055 0.75 +1.1
636,845 - ABIE41_RS03055 0.75 +2.0
636,845 - ABIE41_RS03055 0.75 +2.3
636,845 - ABIE41_RS03055 0.75 -1.1
636,845 - ABIE41_RS03055 0.75 +0.3
636,902 - ABIE41_RS03055 0.82 +1.1
637,028 - +2.2
637,030 + -1.3
637,030 + +1.4
637,030 + -2.0
637,088 + +0.4

Or see this region's nucleotide sequence