Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS30695 and ABIE40_RS30700 are separated by 137 nucleotides
ABIE40_RS30695: ABIE40_RS30695 - hypothetical protein, at 830,053 to 830,616
_RS30695
ABIE40_RS30700: ABIE40_RS30700 - hypothetical protein, at 830,754 to 831,170
_RS30700
Position (kb) 830
831
832 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 829.773 kb on + strand at 829.773 kb on + strand at 829.773 kb on + strand at 829.774 kb on - strand at 829.774 kb on - strand at 829.774 kb on - strand at 829.774 kb on - strand at 829.816 kb on + strand at 829.841 kb on + strand at 829.841 kb on + strand at 829.880 kb on + strand at 829.880 kb on + strand at 829.880 kb on + strand at 829.881 kb on - strand at 829.881 kb on - strand at 829.881 kb on - strand at 829.881 kb on - strand at 829.932 kb on - strand at 829.959 kb on + strand at 829.960 kb on - strand at 829.960 kb on - strand at 829.960 kb on - strand at 830.008 kb on + strand at 830.009 kb on - strand at 830.009 kb on - strand at 830.010 kb on + strand at 830.011 kb on - strand at 830.049 kb on - strand at 830.079 kb on + strand at 830.079 kb on + strand at 830.079 kb on + strand at 830.080 kb on - strand at 830.080 kb on - strand at 830.087 kb on - strand at 830.174 kb on + strand, within ABIE40_RS30695 at 830.242 kb on + strand, within ABIE40_RS30695 at 830.242 kb on + strand, within ABIE40_RS30695 at 830.243 kb on - strand, within ABIE40_RS30695 at 830.291 kb on + strand, within ABIE40_RS30695 at 830.291 kb on + strand, within ABIE40_RS30695 at 830.350 kb on - strand, within ABIE40_RS30695 at 830.413 kb on + strand, within ABIE40_RS30695 at 830.419 kb on - strand, within ABIE40_RS30695 at 830.469 kb on + strand, within ABIE40_RS30695 at 830.469 kb on + strand, within ABIE40_RS30695 at 830.470 kb on - strand, within ABIE40_RS30695 at 830.470 kb on - strand, within ABIE40_RS30695 at 830.470 kb on - strand, within ABIE40_RS30695 at 830.755 kb on + strand at 830.756 kb on - strand at 830.756 kb on - strand at 830.756 kb on - strand at 830.824 kb on - strand, within ABIE40_RS30700 at 831.209 kb on + strand at 831.209 kb on + strand at 831.209 kb on + strand at 831.209 kb on + strand at 831.210 kb on - strand at 831.210 kb on - strand at 831.210 kb on - strand at 831.210 kb on - strand at 831.210 kb on - strand at 831.210 kb on - strand at 831.251 kb on + strand at 831.265 kb on + strand at 831.332 kb on + strand at 831.436 kb on + strand at 831.437 kb on - strand at 831.587 kb on + strand at 831.587 kb on + strand at 831.587 kb on + strand at 831.588 kb on - strand at 831.588 kb on - strand at 831.597 kb on + strand at 831.597 kb on + strand at 831.617 kb on - strand at 831.627 kb on + strand at 831.628 kb on - strand at 831.669 kb on + strand at 831.669 kb on + strand at 831.670 kb on - strand at 831.814 kb on + strand at 831.856 kb on + strand at 831.856 kb on + strand at 831.857 kb on - strand at 831.857 kb on - strand at 831.879 kb on - strand at 831.982 kb on + strand at 831.983 kb on - strand at 831.983 kb on - strand at 831.989 kb on - strand at 831.989 kb on - strand at 832.167 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 829,773 + +2.4 829,773 + -0.3 829,773 + -0.7 829,774 - -0.2 829,774 - +2.8 829,774 - -0.4 829,774 - -1.2 829,816 + -0.1 829,841 + +0.6 829,841 + -0.1 829,880 + -1.1 829,880 + +1.5 829,880 + +0.2 829,881 - +0.0 829,881 - +1.8 829,881 - -0.1 829,881 - -0.5 829,932 - +0.1 829,959 + +1.1 829,960 - -2.5 829,960 - +0.2 829,960 - +1.3 830,008 + -0.6 830,009 - -1.0 830,009 - -2.0 830,010 + +0.8 830,011 - -0.2 830,049 - +1.0 830,079 + -0.5 830,079 + -0.2 830,079 + +1.2 830,080 - -0.5 830,080 - -1.8 830,087 - -0.6 830,174 + ABIE40_RS30695 0.21 -0.6 830,242 + ABIE40_RS30695 0.34 -0.4 830,242 + ABIE40_RS30695 0.34 -1.3 830,243 - ABIE40_RS30695 0.34 -0.3 830,291 + ABIE40_RS30695 0.42 +0.3 830,291 + ABIE40_RS30695 0.42 +0.2 830,350 - ABIE40_RS30695 0.53 +1.2 830,413 + ABIE40_RS30695 0.64 +0.2 830,419 - ABIE40_RS30695 0.65 +2.0 830,469 + ABIE40_RS30695 0.74 +0.8 830,469 + ABIE40_RS30695 0.74 +1.3 830,470 - ABIE40_RS30695 0.74 +0.8 830,470 - ABIE40_RS30695 0.74 -1.7 830,470 - ABIE40_RS30695 0.74 -0.6 830,755 + -0.8 830,756 - -0.0 830,756 - -1.9 830,756 - -0.0 830,824 - ABIE40_RS30700 0.17 -1.5 831,209 + +0.2 831,209 + +0.7 831,209 + -0.8 831,209 + -1.3 831,210 - -1.0 831,210 - -0.6 831,210 - -1.6 831,210 - +0.2 831,210 - -1.3 831,210 - -0.4 831,251 + -0.4 831,265 + -0.8 831,332 + -0.7 831,436 + -0.6 831,437 - +0.1 831,587 + +0.1 831,587 + -0.3 831,587 + +0.0 831,588 - -0.9 831,588 - -0.1 831,597 + -0.8 831,597 + +1.8 831,617 - +0.3 831,627 + +0.2 831,628 - +0.4 831,669 + +0.7 831,669 + +0.3 831,670 - +0.4 831,814 + +0.2 831,856 + -0.8 831,856 + +0.2 831,857 - +0.4 831,857 - +1.4 831,879 - +0.6 831,982 + +0.4 831,983 - -0.5 831,983 - -0.1 831,989 - +2.8 831,989 - +0.3 832,167 + +0.2
Or see this region's nucleotide sequence