Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS26725 and ABIE40_RS26730 are separated by 239 nucleotides ABIE40_RS26730 and ABIE40_RS26735 are separated by 699 nucleotides
ABIE40_RS26725: ABIE40_RS26725 - mechanosensitive ion channel domain-containing protein, at 65,255 to 66,064
_RS26725
ABIE40_RS26730: ABIE40_RS26730 - hypothetical protein, at 66,304 to 66,501
_RS26730
ABIE40_RS26735: ABIE40_RS26735 - hypothetical protein, at 67,201 to 67,353
_RS26735
Position (kb) 66
67 Strain fitness (log2 ratio) -2
-1
0
1
2 at 65.428 kb on + strand, within ABIE40_RS26725 at 65.429 kb on - strand, within ABIE40_RS26725 at 65.429 kb on - strand, within ABIE40_RS26725 at 65.530 kb on + strand, within ABIE40_RS26725 at 65.530 kb on + strand, within ABIE40_RS26725 at 65.530 kb on + strand, within ABIE40_RS26725 at 65.531 kb on - strand, within ABIE40_RS26725 at 65.531 kb on - strand, within ABIE40_RS26725 at 65.537 kb on + strand, within ABIE40_RS26725 at 65.555 kb on + strand, within ABIE40_RS26725 at 65.556 kb on - strand, within ABIE40_RS26725 at 65.580 kb on + strand, within ABIE40_RS26725 at 65.661 kb on + strand, within ABIE40_RS26725 at 65.670 kb on - strand, within ABIE40_RS26725 at 65.688 kb on - strand, within ABIE40_RS26725 at 65.690 kb on + strand, within ABIE40_RS26725 at 65.690 kb on + strand, within ABIE40_RS26725 at 65.691 kb on - strand, within ABIE40_RS26725 at 65.691 kb on - strand, within ABIE40_RS26725 at 65.691 kb on - strand, within ABIE40_RS26725 at 65.725 kb on + strand, within ABIE40_RS26725 at 65.726 kb on - strand, within ABIE40_RS26725 at 65.765 kb on + strand, within ABIE40_RS26725 at 65.841 kb on + strand, within ABIE40_RS26725 at 65.908 kb on + strand, within ABIE40_RS26725 at 65.909 kb on - strand, within ABIE40_RS26725 at 65.909 kb on - strand, within ABIE40_RS26725 at 65.910 kb on + strand, within ABIE40_RS26725 at 65.911 kb on - strand, within ABIE40_RS26725 at 65.924 kb on + strand, within ABIE40_RS26725 at 66.032 kb on - strand at 66.037 kb on + strand at 66.037 kb on + strand at 66.038 kb on - strand at 66.038 kb on - strand at 66.052 kb on + strand at 66.369 kb on - strand, within ABIE40_RS26730 at 66.371 kb on - strand, within ABIE40_RS26730 at 66.418 kb on - strand, within ABIE40_RS26730 at 66.497 kb on - strand at 66.500 kb on - strand at 66.579 kb on + strand at 66.580 kb on - strand at 66.638 kb on + strand at 66.639 kb on - strand at 66.639 kb on - strand at 66.639 kb on - strand at 66.721 kb on + strand at 66.791 kb on - strand at 66.801 kb on + strand at 66.801 kb on + strand at 66.801 kb on + strand at 66.802 kb on - strand at 66.802 kb on - strand at 66.802 kb on - strand at 66.802 kb on - strand at 67.062 kb on + strand at 67.071 kb on + strand at 67.072 kb on - strand at 67.198 kb on - strand at 67.406 kb on - strand at 67.423 kb on + strand at 67.423 kb on + strand at 67.423 kb on + strand at 67.423 kb on + strand at 67.442 kb on + strand at 67.442 kb on + strand at 67.442 kb on + strand at 67.442 kb on + strand at 67.442 kb on + strand at 67.442 kb on + strand at 67.443 kb on - strand at 67.465 kb on + strand at 67.476 kb on + strand at 67.476 kb on + strand at 67.484 kb on + strand at 67.485 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 65,428 + ABIE40_RS26725 0.21 +0.2 65,429 - ABIE40_RS26725 0.21 -1.8 65,429 - ABIE40_RS26725 0.21 +0.9 65,530 + ABIE40_RS26725 0.34 +0.4 65,530 + ABIE40_RS26725 0.34 -0.2 65,530 + ABIE40_RS26725 0.34 -0.6 65,531 - ABIE40_RS26725 0.34 -2.1 65,531 - ABIE40_RS26725 0.34 -0.8 65,537 + ABIE40_RS26725 0.35 -0.5 65,555 + ABIE40_RS26725 0.37 +0.3 65,556 - ABIE40_RS26725 0.37 -1.7 65,580 + ABIE40_RS26725 0.40 +0.3 65,661 + ABIE40_RS26725 0.50 +0.6 65,670 - ABIE40_RS26725 0.51 -0.0 65,688 - ABIE40_RS26725 0.53 -0.2 65,690 + ABIE40_RS26725 0.54 +2.4 65,690 + ABIE40_RS26725 0.54 -0.6 65,691 - ABIE40_RS26725 0.54 +0.1 65,691 - ABIE40_RS26725 0.54 -0.0 65,691 - ABIE40_RS26725 0.54 -1.2 65,725 + ABIE40_RS26725 0.58 -2.6 65,726 - ABIE40_RS26725 0.58 -0.5 65,765 + ABIE40_RS26725 0.63 -1.9 65,841 + ABIE40_RS26725 0.72 +0.1 65,908 + ABIE40_RS26725 0.81 +1.0 65,909 - ABIE40_RS26725 0.81 +0.2 65,909 - ABIE40_RS26725 0.81 -0.5 65,910 + ABIE40_RS26725 0.81 +0.3 65,911 - ABIE40_RS26725 0.81 -1.5 65,924 + ABIE40_RS26725 0.83 -0.3 66,032 - -0.4 66,037 + -0.3 66,037 + -0.0 66,038 - -0.6 66,038 - -1.6 66,052 + -1.4 66,369 - ABIE40_RS26730 0.33 -1.6 66,371 - ABIE40_RS26730 0.34 -0.5 66,418 - ABIE40_RS26730 0.58 -1.3 66,497 - +0.9 66,500 - +0.5 66,579 + -0.8 66,580 - +0.7 66,638 + -0.9 66,639 - +0.3 66,639 - +0.9 66,639 - +0.4 66,721 + -0.5 66,791 - +0.4 66,801 + -1.7 66,801 + -0.4 66,801 + -1.1 66,802 - -0.2 66,802 - -0.4 66,802 - +1.4 66,802 - -0.9 67,062 + +1.1 67,071 + +2.1 67,072 - -0.3 67,198 - +1.3 67,406 - +0.7 67,423 + -1.3 67,423 + +0.8 67,423 + +0.5 67,423 + -1.0 67,442 + +0.2 67,442 + -0.1 67,442 + -0.0 67,442 + -1.6 67,442 + +0.7 67,442 + -1.7 67,443 - +0.7 67,465 + -1.7 67,476 + +0.2 67,476 + -1.3 67,484 + +0.3 67,485 - -0.6
Or see this region's nucleotide sequence