Strain Fitness in Escherichia coli BW25113 around b0082

Experiment: D-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmraZ and mraW are separated by 1 nucleotidesmraW and ftsL overlap by 4 nucleotidesftsL and ftsI are separated by 15 nucleotides b0081: mraZ - hypothetical protein (NCBI), at 89,634 to 90,092 mraZ b0082: mraW - S-adenosyl-methyltransferase (NCBI), at 90,094 to 91,035 mraW b0083: ftsL - membrane bound cell division protein at septum containing leucine zipper motif (NCBI), at 91,032 to 91,397 ftsL b0084: ftsI - transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) (NCBI), at 91,413 to 93,179 ftsI Position (kb) 90 91 92Strain fitness (log2 ratio) -2 -1 0 1at 89.122 kb on + strandat 89.132 kb on + strandat 89.225 kb on + strandat 89.294 kb on - strandat 89.307 kb on + strandat 89.307 kb on + strandat 89.312 kb on + strandat 89.312 kb on + strandat 89.312 kb on + strandat 89.313 kb on - strandat 89.315 kb on - strandat 89.325 kb on + strandat 89.325 kb on - strandat 89.330 kb on - strandat 89.391 kb on + strandat 89.393 kb on + strandat 89.401 kb on - strandat 89.411 kb on + strandat 89.411 kb on + strandat 89.416 kb on - strandat 89.508 kb on + strandat 89.508 kb on + strandat 89.542 kb on - strandat 89.542 kb on - strandat 89.550 kb on + strandat 89.558 kb on - strandat 89.649 kb on + strandat 89.649 kb on + strandat 89.658 kb on + strandat 89.680 kb on + strand, within mraZat 89.685 kb on + strand, within mraZat 89.917 kb on + strand, within mraZat 89.917 kb on + strand, within mraZat 89.981 kb on + strand, within mraZat 90.039 kb on + strand, within mraZat 90.039 kb on + strand, within mraZat 90.042 kb on + strand, within mraZat 90.042 kb on + strand, within mraZat 90.230 kb on + strand, within mraWat 90.473 kb on + strand, within mraWat 90.518 kb on + strand, within mraWat 90.544 kb on + strand, within mraWat 90.681 kb on + strand, within mraWat 90.701 kb on + strand, within mraWat 90.783 kb on + strand, within mraWat 90.887 kb on + strand, within mraWat 90.896 kb on + strand, within mraWat 90.899 kb on + strand, within mraWat 90.979 kb on + strandat 91.008 kb on + strandat 91.020 kb on + strandat 91.020 kb on + strandat 91.020 kb on + strandat 91.028 kb on + strandat 91.028 kb on + strandat 91.357 kb on + strandat 91.362 kb on + strandat 91.378 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Serine (C)
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89,122 + +0.2
89,132 + +0.3
89,225 + +0.1
89,294 - -0.4
89,307 + -0.2
89,307 + +0.4
89,312 + +0.0
89,312 + -0.3
89,312 + +0.2
89,313 - -0.8
89,315 - -0.4
89,325 + -0.1
89,325 - -0.9
89,330 - -2.0
89,391 + -0.2
89,393 + -0.5
89,401 - -0.9
89,411 + +0.2
89,411 + -1.9
89,416 - -1.2
89,508 + +0.6
89,508 + -0.1
89,542 - -0.9
89,542 - -2.1
89,550 + -0.7
89,558 - -1.7
89,649 + -0.5
89,649 + -0.8
89,658 + -1.0
89,680 + mraZ b0081 0.10 -1.2
89,685 + mraZ b0081 0.11 -0.4
89,917 + mraZ b0081 0.62 -0.7
89,917 + mraZ b0081 0.62 -1.1
89,981 + mraZ b0081 0.76 -1.1
90,039 + mraZ b0081 0.88 -1.0
90,039 + mraZ b0081 0.88 -1.0
90,042 + mraZ b0081 0.89 -0.2
90,042 + mraZ b0081 0.89 +1.2
90,230 + mraW b0082 0.14 +1.2
90,473 + mraW b0082 0.40 -0.1
90,518 + mraW b0082 0.45 -0.4
90,544 + mraW b0082 0.48 +0.7
90,681 + mraW b0082 0.62 +0.3
90,701 + mraW b0082 0.64 +0.2
90,783 + mraW b0082 0.73 -0.2
90,887 + mraW b0082 0.84 +0.4
90,896 + mraW b0082 0.85 -0.2
90,899 + mraW b0082 0.85 -0.8
90,979 + +0.4
91,008 + -0.7
91,020 + -2.5
91,020 + -0.4
91,020 + -0.2
91,028 + -0.7
91,028 + -0.7
91,357 + +1.2
91,362 + -0.1
91,378 + -0.4

Or see this region's nucleotide sequence