Strain Fitness in Pseudomonas sp. RS175 around PFR28_03260

Experiment: Cytidine carbon 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine carbon 10 mM
3,768,064	+				+0.8
3,768,074	+				-0.9
3,768,075	-				+0.7
3,768,075	-				-0.1
3,768,473	+				+0.3
3,768,473	+				+0.1
3,768,474	-				-0.1
3,768,474	-				+0.4
3,768,474	-				+0.7
3,768,502	+				-0.6
3,768,502	+				+1.3
3,768,502	+				+1.0
3,768,502	+				-0.2
3,768,502	+				-0.6
3,768,503	-				-0.4
3,768,503	-				+0.7
3,768,503	-				+0.6
3,768,503	-				-0.8
3,768,503	-				-0.2
3,768,503	-				-2.9
3,768,503	-				+0.3
3,768,507	+				+0.3
3,768,507	+				-0.1
3,768,508	-				+0.1
3,768,508	-				+1.6
3,768,549	+		PFR28_03259	0.12	+0.4
3,768,613	+		PFR28_03259	0.26	+0.1
3,768,614	-		PFR28_03259	0.26	+0.3
3,768,979	+				-1.0
3,768,979	+				+0.9
3,768,979	+				-1.9
3,768,979	+				+0.4
3,768,979	+				+1.2
3,768,980	-				-0.1
3,768,980	-				+0.3
3,768,980	-				-1.0
3,768,992	+				+0.2
3,769,026	+				+0.7
3,769,026	+				-1.6
3,769,026	+				+0.4
3,769,026	+				-0.3
3,769,026	+				+0.1
3,769,026	+				-0.9
3,769,026	+				-1.5
3,769,026	+				-0.1
3,769,027	-				-2.3
3,769,027	-				-1.2
3,769,027	-				+0.1
3,769,027	-				+1.7
3,769,027	-				-1.0
3,769,027	-				-0.6
3,769,027	-				+1.1
3,769,027	-				-0.1
3,769,027	-				+1.4
3,769,027	-				+0.4
3,769,027	-				-0.6
3,769,030	+				+0.2
3,769,031	-				+0.5
3,769,200	+		PFR28_03260	0.20	-0.3
3,769,200	+		PFR28_03260	0.20	-1.5
3,769,200	+		PFR28_03260	0.20	-2.1
3,769,200	+		PFR28_03260	0.20	-2.5
3,769,413	+		PFR28_03260	0.49	-2.0
3,769,413	+		PFR28_03260	0.49	+0.5
3,769,414	-		PFR28_03260	0.49	-1.3
3,769,523	+		PFR28_03260	0.63	-1.8
3,769,594	-		PFR28_03260	0.73	-0.8
3,769,594	-		PFR28_03260	0.73	-0.7
3,769,653	+		PFR28_03260	0.81	+0.2
3,769,654	-		PFR28_03260	0.81	-0.0
3,769,654	-		PFR28_03260	0.81	+0.3
3,769,709	+		PFR28_03260	0.88	-1.0
3,769,710	-		PFR28_03260	0.88	+0.3
3,769,710	-		PFR28_03260	0.88	-2.7
3,769,710	-		PFR28_03260	0.88	+0.4
3,769,710	-		PFR28_03260	0.88	-3.0
3,769,750	-				+0.3
3,769,756	+				+0.8
3,769,756	+				-0.6
3,769,756	+				-1.0
3,769,756	+				+0.5
3,769,757	-				+0.8
3,769,757	-				+1.0
3,769,757	-				+2.0
3,769,757	-				-0.7
3,769,781	+				+0.2
3,769,848	-				-2.7
3,769,856	+				+2.7
3,769,856	+				+0.0
3,769,857	-				-0.2
3,769,869	+				+0.7
3,769,869	+				-2.2
3,769,870	-				+0.1
3,769,870	-				+0.6
3,769,974	-				+0.2
3,770,047	+				+0.7
3,770,219	+		PFR28_03261	0.19	+0.3
3,770,220	-		PFR28_03261	0.19	-0.9
3,770,220	-		PFR28_03261	0.19	+0.0
3,770,226	+		PFR28_03261	0.19	+0.1
3,770,226	+		PFR28_03261	0.19	+0.0
3,770,226	+		PFR28_03261	0.19	+0.1
3,770,226	+		PFR28_03261	0.19	-1.3
3,770,226	+		PFR28_03261	0.19	+1.6
3,770,226	+		PFR28_03261	0.19	+2.1
3,770,226	+		PFR28_03261	0.19	-2.1
3,770,226	+		PFR28_03261	0.19	+1.1
3,770,226	+		PFR28_03261	0.19	+0.6
3,770,227	-		PFR28_03261	0.19	-1.2
3,770,227	-		PFR28_03261	0.19	+1.6
3,770,227	-		PFR28_03261	0.19	-1.5
3,770,227	-		PFR28_03261	0.19	-0.9
3,770,227	-		PFR28_03261	0.19	+0.1
3,770,291	+		PFR28_03261	0.24	+1.5
3,770,291	+		PFR28_03261	0.24	+0.1
3,770,291	+		PFR28_03261	0.24	-2.4
3,770,291	+		PFR28_03261	0.24	-0.3
3,770,291	+		PFR28_03261	0.24	-0.6
3,770,291	+		PFR28_03261	0.24	+0.6
3,770,291	+		PFR28_03261	0.24	-0.5
3,770,291	+		PFR28_03261	0.24	+1.0
3,770,291	+		PFR28_03261	0.24	+0.6
3,770,291	+		PFR28_03261	0.24	+0.2
3,770,291	+		PFR28_03261	0.24	-1.5
3,770,291	+		PFR28_03261	0.24	+1.0
3,770,291	+		PFR28_03261	0.24	-2.4
3,770,291	+		PFR28_03261	0.24	-1.6
3,770,291	+		PFR28_03261	0.24	+0.2
3,770,291	+		PFR28_03261	0.24	-1.4
3,770,291	+		PFR28_03261	0.24	+1.1
3,770,292	-		PFR28_03261	0.24	+0.1
3,770,292	-		PFR28_03261	0.24	+0.2
3,770,292	-		PFR28_03261	0.24	-0.4
3,770,292	-		PFR28_03261	0.24	-1.2
3,770,292	-		PFR28_03261	0.24	+0.8
3,770,292	-		PFR28_03261	0.24	-1.0
3,770,292	-		PFR28_03261	0.24	-0.7
3,770,292	-		PFR28_03261	0.24	-0.2
3,770,292	-		PFR28_03261	0.24	-0.8
3,770,292	-		PFR28_03261	0.24	+2.0
3,770,292	-		PFR28_03261	0.24	-2.2
3,770,292	-		PFR28_03261	0.24	-1.9
3,770,292	-		PFR28_03261	0.24	-2.4
3,770,292	-		PFR28_03261	0.24	+1.2
3,770,292	-		PFR28_03261	0.24	-0.3
3,770,292	-		PFR28_03261	0.24	+0.1
3,770,292	-		PFR28_03261	0.24	+0.6
3,770,292	-		PFR28_03261	0.24	-1.1
3,770,292	-		PFR28_03261	0.24	+0.8
3,770,292	-		PFR28_03261	0.24	-0.9
3,770,292	-		PFR28_03261	0.24	+1.3
3,770,292	-		PFR28_03261	0.24	-0.1
3,770,292	-		PFR28_03261	0.24	-1.7
3,770,373	-		PFR28_03261	0.30	+1.8
3,770,373	-		PFR28_03261	0.30	+0.6
3,770,373	-		PFR28_03261	0.30	-1.4
3,770,511	-		PFR28_03261	0.41	+0.7
3,770,568	+		PFR28_03261	0.45	+0.3
3,770,568	+		PFR28_03261	0.45	-0.4
3,770,568	+		PFR28_03261	0.45	+0.1
3,770,569	-		PFR28_03261	0.45	-1.7
3,770,618	+		PFR28_03261	0.49	-1.3
3,770,618	+		PFR28_03261	0.49	+0.6
3,770,618	+		PFR28_03261	0.49	-0.7
3,770,618	+		PFR28_03261	0.49	+1.3
3,770,618	+		PFR28_03261	0.49	-0.1
3,770,618	+		PFR28_03261	0.49	+0.6
3,770,619	-		PFR28_03261	0.49	+1.2
3,770,619	-		PFR28_03261	0.49	-0.3
3,770,619	-		PFR28_03261	0.49	-0.3
3,770,619	-		PFR28_03261	0.49	-0.3
3,770,619	-		PFR28_03261	0.49	-0.2
3,770,619	-		PFR28_03261	0.49	+1.0
3,770,619	-		PFR28_03261	0.49	+0.5
3,770,619	-		PFR28_03261	0.49	-1.2
3,770,619	-		PFR28_03261	0.49	-0.7
3,770,619	-		PFR28_03261	0.49	-0.3
3,770,619	-		PFR28_03261	0.49	-0.8
3,770,619	-		PFR28_03261	0.49	-1.6
3,770,637	-		PFR28_03261	0.50	+0.1
3,770,637	-		PFR28_03261	0.50	-0.4
3,770,637	-		PFR28_03261	0.50	+0.4