Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24960 and IAI46_24965 are separated by 112 nucleotides IAI46_24965 and IAI46_24970 are separated by 35 nucleotides IAI46_24970 and IAI46_24975 are separated by 182 nucleotides
IAI46_24960: IAI46_24960 - nitrogen regulation protein NR(I), at 5,327,232 to 5,328,644
_24960
IAI46_24965: IAI46_24965 - YshB family small membrane protein, at 5,328,757 to 5,328,879
_24965
IAI46_24970: IAI46_24970 - oxygen-independent coproporphyrinogen III oxidase, at 5,328,915 to 5,330,288
_24970
IAI46_24975: IAI46_24975 - Der GTPase-activating protein YihI, at 5,330,471 to 5,331,019
_24975
Position (kb)
5328
5329
5330
5331 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5328.055 kb on + strand, within IAI46_24960 at 5328.056 kb on - strand, within IAI46_24960 at 5328.056 kb on - strand, within IAI46_24960 at 5328.186 kb on - strand, within IAI46_24960 at 5328.204 kb on + strand, within IAI46_24960 at 5328.204 kb on + strand, within IAI46_24960 at 5328.204 kb on + strand, within IAI46_24960 at 5328.300 kb on - strand, within IAI46_24960 at 5328.300 kb on - strand, within IAI46_24960 at 5328.335 kb on - strand, within IAI46_24960 at 5328.362 kb on - strand, within IAI46_24960 at 5328.376 kb on + strand, within IAI46_24960 at 5328.376 kb on + strand, within IAI46_24960 at 5328.376 kb on + strand, within IAI46_24960 at 5328.376 kb on + strand, within IAI46_24960 at 5328.377 kb on - strand, within IAI46_24960 at 5328.422 kb on + strand, within IAI46_24960 at 5328.554 kb on + strand at 5328.566 kb on + strand at 5328.567 kb on - strand at 5328.605 kb on + strand at 5328.606 kb on - strand at 5328.642 kb on + strand at 5328.642 kb on + strand at 5328.643 kb on - strand at 5328.643 kb on - strand at 5328.661 kb on + strand at 5328.662 kb on - strand at 5328.662 kb on - strand at 5328.695 kb on - strand at 5328.706 kb on + strand at 5328.726 kb on + strand at 5328.726 kb on + strand at 5328.726 kb on + strand at 5328.726 kb on + strand at 5328.726 kb on + strand at 5328.865 kb on - strand, within IAI46_24965 at 5328.865 kb on - strand, within IAI46_24965 at 5328.865 kb on - strand, within IAI46_24965 at 5328.909 kb on + strand at 5328.909 kb on + strand at 5328.921 kb on - strand at 5328.961 kb on + strand at 5328.961 kb on + strand at 5328.961 kb on + strand at 5328.961 kb on + strand at 5328.961 kb on + strand at 5328.962 kb on - strand at 5328.962 kb on - strand at 5328.966 kb on - strand at 5328.966 kb on - strand at 5328.966 kb on - strand at 5328.984 kb on - strand at 5328.984 kb on - strand at 5328.997 kb on - strand at 5329.094 kb on - strand, within IAI46_24970 at 5329.094 kb on - strand, within IAI46_24970 at 5329.125 kb on + strand, within IAI46_24970 at 5329.125 kb on + strand, within IAI46_24970 at 5329.125 kb on + strand, within IAI46_24970 at 5329.126 kb on - strand, within IAI46_24970 at 5329.126 kb on - strand, within IAI46_24970 at 5329.126 kb on - strand, within IAI46_24970 at 5329.126 kb on - strand, within IAI46_24970 at 5329.135 kb on + strand, within IAI46_24970 at 5329.136 kb on - strand, within IAI46_24970 at 5329.136 kb on - strand, within IAI46_24970 at 5329.136 kb on - strand, within IAI46_24970 at 5329.252 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.282 kb on + strand, within IAI46_24970 at 5329.283 kb on - strand, within IAI46_24970 at 5329.283 kb on - strand, within IAI46_24970 at 5329.283 kb on - strand, within IAI46_24970 at 5329.283 kb on - strand, within IAI46_24970 at 5329.283 kb on - strand, within IAI46_24970 at 5329.349 kb on + strand, within IAI46_24970 at 5329.350 kb on - strand, within IAI46_24970 at 5329.350 kb on - strand, within IAI46_24970 at 5329.351 kb on + strand, within IAI46_24970 at 5329.351 kb on + strand, within IAI46_24970 at 5329.351 kb on + strand, within IAI46_24970 at 5329.351 kb on + strand, within IAI46_24970 at 5329.352 kb on - strand, within IAI46_24970 at 5329.437 kb on - strand, within IAI46_24970 at 5329.557 kb on - strand, within IAI46_24970 at 5329.564 kb on + strand, within IAI46_24970 at 5329.564 kb on + strand, within IAI46_24970 at 5329.565 kb on - strand, within IAI46_24970 at 5329.565 kb on - strand, within IAI46_24970 at 5329.565 kb on - strand, within IAI46_24970 at 5329.565 kb on - strand, within IAI46_24970 at 5329.568 kb on + strand, within IAI46_24970 at 5329.568 kb on + strand, within IAI46_24970 at 5329.568 kb on + strand, within IAI46_24970 at 5329.569 kb on - strand, within IAI46_24970 at 5329.569 kb on - strand, within IAI46_24970 at 5329.572 kb on + strand, within IAI46_24970 at 5329.593 kb on + strand, within IAI46_24970 at 5329.593 kb on + strand, within IAI46_24970 at 5329.593 kb on + strand, within IAI46_24970 at 5329.593 kb on + strand, within IAI46_24970 at 5329.594 kb on - strand, within IAI46_24970 at 5329.594 kb on - strand, within IAI46_24970 at 5329.618 kb on + strand, within IAI46_24970 at 5329.618 kb on + strand, within IAI46_24970 at 5329.618 kb on + strand, within IAI46_24970 at 5329.619 kb on - strand, within IAI46_24970 at 5329.654 kb on + strand, within IAI46_24970 at 5329.659 kb on + strand, within IAI46_24970 at 5329.659 kb on + strand, within IAI46_24970 at 5329.659 kb on + strand, within IAI46_24970 at 5329.659 kb on + strand, within IAI46_24970 at 5329.659 kb on + strand, within IAI46_24970 at 5329.660 kb on - strand, within IAI46_24970 at 5329.666 kb on - strand, within IAI46_24970 at 5329.667 kb on + strand, within IAI46_24970 at 5329.680 kb on - strand, within IAI46_24970 at 5329.718 kb on + strand, within IAI46_24970 at 5329.719 kb on - strand, within IAI46_24970 at 5329.719 kb on - strand, within IAI46_24970 at 5329.719 kb on - strand, within IAI46_24970 at 5329.763 kb on + strand, within IAI46_24970 at 5329.796 kb on + strand, within IAI46_24970 at 5329.808 kb on + strand, within IAI46_24970 at 5329.939 kb on + strand, within IAI46_24970 at 5329.940 kb on - strand, within IAI46_24970 at 5329.940 kb on - strand, within IAI46_24970 at 5329.940 kb on - strand, within IAI46_24970 at 5329.979 kb on + strand, within IAI46_24970 at 5329.979 kb on + strand, within IAI46_24970 at 5330.035 kb on + strand, within IAI46_24970 at 5330.035 kb on + strand, within IAI46_24970 at 5330.036 kb on - strand, within IAI46_24970 at 5330.036 kb on - strand, within IAI46_24970 at 5330.089 kb on + strand, within IAI46_24970 at 5330.090 kb on - strand, within IAI46_24970 at 5330.114 kb on + strand, within IAI46_24970 at 5330.115 kb on - strand, within IAI46_24970 at 5330.122 kb on + strand, within IAI46_24970 at 5330.122 kb on + strand, within IAI46_24970 at 5330.122 kb on + strand, within IAI46_24970 at 5330.123 kb on - strand, within IAI46_24970 at 5330.183 kb on - strand at 5330.221 kb on + strand at 5330.222 kb on - strand at 5330.236 kb on + strand at 5330.236 kb on + strand at 5330.237 kb on - strand at 5330.237 kb on - strand at 5330.237 kb on - strand at 5330.237 kb on - strand at 5330.237 kb on - strand at 5330.237 kb on - strand at 5330.240 kb on + strand at 5330.242 kb on + strand at 5330.243 kb on - strand at 5330.243 kb on - strand at 5330.341 kb on + strand at 5330.341 kb on + strand at 5330.342 kb on - strand at 5330.399 kb on + strand at 5330.399 kb on + strand at 5330.399 kb on + strand at 5330.399 kb on + strand at 5330.400 kb on - strand at 5330.424 kb on + strand at 5330.425 kb on - strand at 5330.425 kb on - strand at 5330.425 kb on - strand at 5330.439 kb on - strand at 5330.444 kb on + strand at 5330.445 kb on - strand at 5330.445 kb on - strand at 5330.478 kb on - strand at 5330.516 kb on - strand at 5330.516 kb on - strand at 5330.616 kb on + strand, within IAI46_24975 at 5330.617 kb on - strand, within IAI46_24975 at 5330.656 kb on + strand, within IAI46_24975 at 5330.657 kb on - strand, within IAI46_24975 at 5330.660 kb on + strand, within IAI46_24975 at 5331.020 kb on - strand at 5331.020 kb on - strand at 5331.024 kb on + strand at 5331.024 kb on + strand at 5331.024 kb on + strand at 5331.024 kb on + strand at 5331.024 kb on + strand at 5331.024 kb on + strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.025 kb on - strand at 5331.032 kb on + strand at 5331.032 kb on + strand at 5331.032 kb on + strand at 5331.033 kb on - strand at 5331.033 kb on - strand at 5331.033 kb on - strand at 5331.033 kb on - strand at 5331.033 kb on - strand at 5331.033 kb on - strand at 5331.036 kb on + strand at 5331.036 kb on + strand at 5331.036 kb on + strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.037 kb on - strand at 5331.040 kb on + strand at 5331.040 kb on + strand at 5331.041 kb on - strand at 5331.041 kb on - strand at 5331.041 kb on - strand at 5331.041 kb on - strand at 5331.051 kb on + strand at 5331.051 kb on + strand at 5331.051 kb on + strand at 5331.051 kb on + strand at 5331.052 kb on - strand at 5331.057 kb on + strand at 5331.057 kb on + strand at 5331.057 kb on + strand at 5331.057 kb on + strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.058 kb on - strand at 5331.064 kb on + strand at 5331.064 kb on + strand at 5331.064 kb on + strand at 5331.065 kb on - strand at 5331.084 kb on + strand at 5331.155 kb on + strand at 5331.164 kb on + strand at 5331.164 kb on + strand at 5331.165 kb on - strand at 5331.209 kb on + strand at 5331.210 kb on - strand at 5331.211 kb on + strand at 5331.212 kb on - strand at 5331.212 kb on - strand at 5331.232 kb on + strand at 5331.232 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 5,328,055 + IAI46_24960 0.58 -1.5 5,328,056 - IAI46_24960 0.58 -2.1 5,328,056 - IAI46_24960 0.58 +0.5 5,328,186 - IAI46_24960 0.68 +0.3 5,328,204 + IAI46_24960 0.69 -1.0 5,328,204 + IAI46_24960 0.69 +1.1 5,328,204 + IAI46_24960 0.69 -0.4 5,328,300 - IAI46_24960 0.76 -0.7 5,328,300 - IAI46_24960 0.76 -0.5 5,328,335 - IAI46_24960 0.78 -0.8 5,328,362 - IAI46_24960 0.80 -0.2 5,328,376 + IAI46_24960 0.81 +1.0 5,328,376 + IAI46_24960 0.81 -1.3 5,328,376 + IAI46_24960 0.81 -0.5 5,328,376 + IAI46_24960 0.81 -0.6 5,328,377 - IAI46_24960 0.81 -0.6 5,328,422 + IAI46_24960 0.84 +1.2 5,328,554 + -0.5 5,328,566 + +0.4 5,328,567 - -1.4 5,328,605 + -0.7 5,328,606 - +0.8 5,328,642 + +0.1 5,328,642 + -0.6 5,328,643 - +0.2 5,328,643 - +0.0 5,328,661 + -0.2 5,328,662 - +0.5 5,328,662 - +0.2 5,328,695 - -1.3 5,328,706 + -0.6 5,328,726 + +0.5 5,328,726 + -1.2 5,328,726 + -0.1 5,328,726 + +0.8 5,328,726 + +0.2 5,328,865 - IAI46_24965 0.88 +0.1 5,328,865 - IAI46_24965 0.88 -0.6 5,328,865 - IAI46_24965 0.88 +0.3 5,328,909 + -0.3 5,328,909 + -1.9 5,328,921 - +0.0 5,328,961 + +0.1 5,328,961 + -0.5 5,328,961 + -0.2 5,328,961 + -1.0 5,328,961 + +0.1 5,328,962 - +1.1 5,328,962 - -0.7 5,328,966 - +0.5 5,328,966 - -0.0 5,328,966 - -1.4 5,328,984 - -1.1 5,328,984 - +0.8 5,328,997 - +0.9 5,329,094 - IAI46_24970 0.13 +0.5 5,329,094 - IAI46_24970 0.13 -0.2 5,329,125 + IAI46_24970 0.15 +0.9 5,329,125 + IAI46_24970 0.15 +1.0 5,329,125 + IAI46_24970 0.15 -1.6 5,329,126 - IAI46_24970 0.15 +0.5 5,329,126 - IAI46_24970 0.15 +0.1 5,329,126 - IAI46_24970 0.15 -0.0 5,329,126 - IAI46_24970 0.15 +0.1 5,329,135 + IAI46_24970 0.16 +0.2 5,329,136 - IAI46_24970 0.16 -0.1 5,329,136 - IAI46_24970 0.16 -0.6 5,329,136 - IAI46_24970 0.16 +0.4 5,329,252 + IAI46_24970 0.25 +0.4 5,329,282 + IAI46_24970 0.27 -0.6 5,329,282 + IAI46_24970 0.27 +1.9 5,329,282 + IAI46_24970 0.27 +0.0 5,329,282 + IAI46_24970 0.27 -0.1 5,329,282 + IAI46_24970 0.27 +0.0 5,329,282 + IAI46_24970 0.27 +0.4 5,329,282 + IAI46_24970 0.27 -0.3 5,329,283 - IAI46_24970 0.27 -0.3 5,329,283 - IAI46_24970 0.27 +0.4 5,329,283 - IAI46_24970 0.27 +0.7 5,329,283 - IAI46_24970 0.27 +0.1 5,329,283 - IAI46_24970 0.27 -0.8 5,329,349 + IAI46_24970 0.32 -0.7 5,329,350 - IAI46_24970 0.32 -0.6 5,329,350 - IAI46_24970 0.32 +0.1 5,329,351 + IAI46_24970 0.32 +0.0 5,329,351 + IAI46_24970 0.32 +0.2 5,329,351 + IAI46_24970 0.32 +1.2 5,329,351 + IAI46_24970 0.32 +0.7 5,329,352 - IAI46_24970 0.32 -0.7 5,329,437 - IAI46_24970 0.38 +0.2 5,329,557 - IAI46_24970 0.47 -0.5 5,329,564 + IAI46_24970 0.47 +0.3 5,329,564 + IAI46_24970 0.47 +0.5 5,329,565 - IAI46_24970 0.47 -1.1 5,329,565 - IAI46_24970 0.47 -0.6 5,329,565 - IAI46_24970 0.47 -0.2 5,329,565 - IAI46_24970 0.47 -0.0 5,329,568 + IAI46_24970 0.48 +0.3 5,329,568 + IAI46_24970 0.48 +0.4 5,329,568 + IAI46_24970 0.48 -0.6 5,329,569 - IAI46_24970 0.48 +1.3 5,329,569 - IAI46_24970 0.48 +0.3 5,329,572 + IAI46_24970 0.48 -1.3 5,329,593 + IAI46_24970 0.49 -0.1 5,329,593 + IAI46_24970 0.49 +1.3 5,329,593 + IAI46_24970 0.49 +1.2 5,329,593 + IAI46_24970 0.49 +0.6 5,329,594 - IAI46_24970 0.49 -0.0 5,329,594 - IAI46_24970 0.49 +1.5 5,329,618 + IAI46_24970 0.51 -0.6 5,329,618 + IAI46_24970 0.51 +0.1 5,329,618 + IAI46_24970 0.51 -3.3 5,329,619 - IAI46_24970 0.51 +0.6 5,329,654 + IAI46_24970 0.54 +0.3 5,329,659 + IAI46_24970 0.54 -0.3 5,329,659 + IAI46_24970 0.54 -0.5 5,329,659 + IAI46_24970 0.54 -0.2 5,329,659 + IAI46_24970 0.54 -0.5 5,329,659 + IAI46_24970 0.54 -0.4 5,329,660 - IAI46_24970 0.54 +0.6 5,329,666 - IAI46_24970 0.55 +0.2 5,329,667 + IAI46_24970 0.55 +0.3 5,329,680 - IAI46_24970 0.56 -0.6 5,329,718 + IAI46_24970 0.58 -0.4 5,329,719 - IAI46_24970 0.59 -0.1 5,329,719 - IAI46_24970 0.59 -0.6 5,329,719 - IAI46_24970 0.59 +0.3 5,329,763 + IAI46_24970 0.62 -0.4 5,329,796 + IAI46_24970 0.64 -0.1 5,329,808 + IAI46_24970 0.65 -0.2 5,329,939 + IAI46_24970 0.75 +0.3 5,329,940 - IAI46_24970 0.75 +0.3 5,329,940 - IAI46_24970 0.75 -0.2 5,329,940 - IAI46_24970 0.75 -0.7 5,329,979 + IAI46_24970 0.77 -0.3 5,329,979 + IAI46_24970 0.77 -0.8 5,330,035 + IAI46_24970 0.82 +0.0 5,330,035 + IAI46_24970 0.82 +1.5 5,330,036 - IAI46_24970 0.82 -0.9 5,330,036 - IAI46_24970 0.82 +0.4 5,330,089 + IAI46_24970 0.85 +0.3 5,330,090 - IAI46_24970 0.86 +1.2 5,330,114 + IAI46_24970 0.87 +0.1 5,330,115 - IAI46_24970 0.87 +0.1 5,330,122 + IAI46_24970 0.88 -1.1 5,330,122 + IAI46_24970 0.88 -0.1 5,330,122 + IAI46_24970 0.88 -0.2 5,330,123 - IAI46_24970 0.88 +0.9 5,330,183 - +0.5 5,330,221 + +0.0 5,330,222 - +0.7 5,330,236 + -0.2 5,330,236 + +0.5 5,330,237 - +1.0 5,330,237 - +1.3 5,330,237 - -1.0 5,330,237 - -0.1 5,330,237 - +0.1 5,330,237 - +0.3 5,330,240 + +0.1 5,330,242 + +0.7 5,330,243 - -0.8 5,330,243 - -0.0 5,330,341 + +0.1 5,330,341 + -1.1 5,330,342 - +0.3 5,330,399 + -0.9 5,330,399 + +0.5 5,330,399 + +0.5 5,330,399 + +0.3 5,330,400 - +0.6 5,330,424 + -0.6 5,330,425 - +0.3 5,330,425 - +0.1 5,330,425 - +0.3 5,330,439 - +0.3 5,330,444 + -0.0 5,330,445 - +0.2 5,330,445 - +0.5 5,330,478 - -0.1 5,330,516 - +0.0 5,330,516 - -0.4 5,330,616 + IAI46_24975 0.26 +0.0 5,330,617 - IAI46_24975 0.27 +0.3 5,330,656 + IAI46_24975 0.34 -0.5 5,330,657 - IAI46_24975 0.34 +0.1 5,330,660 + IAI46_24975 0.34 +0.4 5,331,020 - +0.1 5,331,020 - +0.1 5,331,024 + -0.5 5,331,024 + +0.8 5,331,024 + +0.5 5,331,024 + -0.2 5,331,024 + +0.5 5,331,024 + +1.2 5,331,025 - -0.0 5,331,025 - +0.3 5,331,025 - +0.1 5,331,025 - +0.2 5,331,025 - +0.0 5,331,025 - +0.4 5,331,025 - +0.2 5,331,025 - +0.5 5,331,032 + -0.1 5,331,032 + +1.1 5,331,032 + -0.2 5,331,033 - +0.4 5,331,033 - +0.7 5,331,033 - -0.3 5,331,033 - +0.4 5,331,033 - +0.6 5,331,033 - +0.9 5,331,036 + +0.8 5,331,036 + +0.3 5,331,036 + -0.1 5,331,037 - -0.1 5,331,037 - +0.7 5,331,037 - +0.6 5,331,037 - +0.2 5,331,037 - +0.4 5,331,037 - +1.2 5,331,037 - +0.3 5,331,037 - +0.8 5,331,037 - +0.5 5,331,040 + -0.0 5,331,040 + -0.6 5,331,041 - +0.2 5,331,041 - -0.4 5,331,041 - -0.1 5,331,041 - +0.5 5,331,051 + +0.1 5,331,051 + -0.6 5,331,051 + -0.1 5,331,051 + -0.3 5,331,052 - -0.5 5,331,057 + -0.5 5,331,057 + -1.4 5,331,057 + +0.2 5,331,057 + +0.1 5,331,058 - +0.4 5,331,058 - +0.4 5,331,058 - -1.9 5,331,058 - -0.4 5,331,058 - +0.4 5,331,058 - -0.2 5,331,058 - +0.2 5,331,058 - -0.0 5,331,058 - -0.5 5,331,064 + +0.5 5,331,064 + +0.4 5,331,064 + -0.0 5,331,065 - -0.8 5,331,084 + +0.3 5,331,155 + +0.2 5,331,164 + +0.4 5,331,164 + -0.1 5,331,165 - +0.1 5,331,209 + +0.2 5,331,210 - +0.4 5,331,211 + -0.0 5,331,212 - -2.0 5,331,212 - -0.1 5,331,232 + -0.3 5,331,232 + +0.1
Or see this region's nucleotide sequence