Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17100 and IAI46_17105 are separated by 139 nucleotides IAI46_17105 and IAI46_17110 are separated by 35 nucleotides IAI46_17110 and IAI46_17115 are separated by 69 nucleotides
IAI46_17100: IAI46_17100 - LysR family transcriptional regulator, at 3,586,532 to 3,587,485
_17100
IAI46_17105: IAI46_17105 - amidohydrolase, at 3,587,625 to 3,588,794
_17105
IAI46_17110: IAI46_17110 - ABC transporter substrate-binding protein, at 3,588,830 to 3,589,618
_17110
IAI46_17115: IAI46_17115 - DUF496 family protein, at 3,589,688 to 3,590,005
_17115
Position (kb)
3587
3588
3589 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3586.673 kb on - strand, within IAI46_17100 at 3586.768 kb on + strand, within IAI46_17100 at 3586.769 kb on - strand, within IAI46_17100 at 3586.769 kb on - strand, within IAI46_17100 at 3586.787 kb on + strand, within IAI46_17100 at 3586.788 kb on - strand, within IAI46_17100 at 3586.903 kb on - strand, within IAI46_17100 at 3586.993 kb on - strand, within IAI46_17100 at 3587.194 kb on + strand, within IAI46_17100 at 3587.194 kb on + strand, within IAI46_17100 at 3587.194 kb on + strand, within IAI46_17100 at 3587.195 kb on - strand, within IAI46_17100 at 3587.195 kb on - strand, within IAI46_17100 at 3587.251 kb on + strand, within IAI46_17100 at 3587.251 kb on + strand, within IAI46_17100 at 3587.389 kb on + strand, within IAI46_17100 at 3587.468 kb on + strand at 3587.469 kb on - strand at 3587.519 kb on - strand at 3587.557 kb on - strand at 3587.568 kb on + strand at 3587.606 kb on - strand at 3587.645 kb on - strand at 3587.653 kb on + strand at 3587.663 kb on + strand at 3587.664 kb on - strand at 3587.694 kb on - strand at 3587.780 kb on + strand, within IAI46_17105 at 3587.898 kb on + strand, within IAI46_17105 at 3587.954 kb on + strand, within IAI46_17105 at 3587.954 kb on + strand, within IAI46_17105 at 3587.955 kb on - strand, within IAI46_17105 at 3587.977 kb on - strand, within IAI46_17105 at 3588.192 kb on - strand, within IAI46_17105 at 3588.195 kb on - strand, within IAI46_17105 at 3588.195 kb on - strand, within IAI46_17105 at 3588.267 kb on - strand, within IAI46_17105 at 3588.400 kb on + strand, within IAI46_17105 at 3588.501 kb on + strand, within IAI46_17105 at 3588.638 kb on + strand, within IAI46_17105 at 3588.639 kb on - strand, within IAI46_17105 at 3588.663 kb on + strand, within IAI46_17105 at 3588.664 kb on - strand, within IAI46_17105 at 3588.664 kb on - strand, within IAI46_17105 at 3588.664 kb on - strand, within IAI46_17105 at 3588.664 kb on - strand, within IAI46_17105 at 3588.666 kb on - strand, within IAI46_17105 at 3588.666 kb on - strand, within IAI46_17105 at 3588.689 kb on + strand at 3588.689 kb on + strand at 3588.759 kb on + strand at 3588.813 kb on - strand at 3588.826 kb on + strand at 3588.826 kb on + strand at 3588.826 kb on + strand at 3588.938 kb on + strand, within IAI46_17110 at 3588.938 kb on + strand, within IAI46_17110 at 3588.939 kb on - strand, within IAI46_17110 at 3588.994 kb on + strand, within IAI46_17110 at 3589.117 kb on + strand, within IAI46_17110 at 3589.496 kb on - strand, within IAI46_17110 at 3589.558 kb on + strand at 3589.562 kb on + strand at 3589.562 kb on + strand at 3589.562 kb on + strand at 3589.563 kb on - strand at 3589.580 kb on - strand at 3589.583 kb on + strand at 3589.651 kb on - strand at 3589.689 kb on + strand at 3589.767 kb on + strand, within IAI46_17115 at 3589.768 kb on - strand, within IAI46_17115 at 3589.768 kb on - strand, within IAI46_17115 at 3589.789 kb on - strand, within IAI46_17115
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,586,673 - IAI46_17100 0.15 -1.2 3,586,768 + IAI46_17100 0.25 -0.3 3,586,769 - IAI46_17100 0.25 +0.6 3,586,769 - IAI46_17100 0.25 -1.2 3,586,787 + IAI46_17100 0.27 +1.0 3,586,788 - IAI46_17100 0.27 -1.2 3,586,903 - IAI46_17100 0.39 -0.4 3,586,993 - IAI46_17100 0.48 +0.7 3,587,194 + IAI46_17100 0.69 +0.7 3,587,194 + IAI46_17100 0.69 +0.3 3,587,194 + IAI46_17100 0.69 +0.4 3,587,195 - IAI46_17100 0.69 +0.1 3,587,195 - IAI46_17100 0.69 +0.1 3,587,251 + IAI46_17100 0.75 +0.4 3,587,251 + IAI46_17100 0.75 -0.0 3,587,389 + IAI46_17100 0.90 +0.5 3,587,468 + -1.1 3,587,469 - +0.8 3,587,519 - +0.5 3,587,557 - +1.2 3,587,568 + +0.9 3,587,606 - +0.0 3,587,645 - +0.6 3,587,653 + +0.3 3,587,663 + -0.0 3,587,664 - -0.2 3,587,694 - +0.2 3,587,780 + IAI46_17105 0.13 +0.3 3,587,898 + IAI46_17105 0.23 +0.4 3,587,954 + IAI46_17105 0.28 +1.4 3,587,954 + IAI46_17105 0.28 -1.6 3,587,955 - IAI46_17105 0.28 +0.4 3,587,977 - IAI46_17105 0.30 -0.2 3,588,192 - IAI46_17105 0.48 +0.9 3,588,195 - IAI46_17105 0.49 -0.7 3,588,195 - IAI46_17105 0.49 +0.6 3,588,267 - IAI46_17105 0.55 -0.6 3,588,400 + IAI46_17105 0.66 +0.3 3,588,501 + IAI46_17105 0.75 +0.9 3,588,638 + IAI46_17105 0.87 +0.5 3,588,639 - IAI46_17105 0.87 +1.1 3,588,663 + IAI46_17105 0.89 -0.7 3,588,664 - IAI46_17105 0.89 -0.0 3,588,664 - IAI46_17105 0.89 -0.7 3,588,664 - IAI46_17105 0.89 -1.0 3,588,664 - IAI46_17105 0.89 +1.0 3,588,666 - IAI46_17105 0.89 -0.0 3,588,666 - IAI46_17105 0.89 +0.9 3,588,689 + -0.3 3,588,689 + +0.9 3,588,759 + -0.3 3,588,813 - +1.0 3,588,826 + -1.0 3,588,826 + +1.4 3,588,826 + -0.6 3,588,938 + IAI46_17110 0.14 +0.4 3,588,938 + IAI46_17110 0.14 -0.5 3,588,939 - IAI46_17110 0.14 +0.3 3,588,994 + IAI46_17110 0.21 -1.3 3,589,117 + IAI46_17110 0.36 +2.6 3,589,496 - IAI46_17110 0.84 -2.4 3,589,558 + -0.0 3,589,562 + +0.4 3,589,562 + +0.7 3,589,562 + -0.5 3,589,563 - +0.1 3,589,580 - -0.6 3,589,583 + +0.5 3,589,651 - +0.4 3,589,689 + +0.1 3,589,767 + IAI46_17115 0.25 +1.6 3,589,768 - IAI46_17115 0.25 -0.0 3,589,768 - IAI46_17115 0.25 -0.5 3,589,789 - IAI46_17115 0.32 +0.3
Or see this region's nucleotide sequence