Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16635 and IAI46_16640 are separated by 474 nucleotides IAI46_16640 and IAI46_16645 are separated by 236 nucleotides IAI46_16645 and IAI46_16650 are separated by 279 nucleotides
IAI46_16635: IAI46_16635 - thymidylate kinase, at 3,484,252 to 3,484,869
_16635
IAI46_16640: IAI46_16640 - hypothetical protein, at 3,485,344 to 3,485,655
_16640
IAI46_16645: IAI46_16645 - DUF2251 domain-containing protein, at 3,485,892 to 3,486,296
_16645
IAI46_16650: IAI46_16650 - LacI family DNA-binding transcriptional regulator, at 3,486,576 to 3,487,616
_16650
Position (kb)
3485
3486 Strain fitness (log2 ratio)
-1
0
1 at 3484.398 kb on + strand, within IAI46_16635 at 3484.398 kb on + strand, within IAI46_16635 at 3484.410 kb on + strand, within IAI46_16635 at 3484.410 kb on + strand, within IAI46_16635 at 3484.467 kb on + strand, within IAI46_16635 at 3484.468 kb on - strand, within IAI46_16635 at 3484.468 kb on - strand, within IAI46_16635 at 3484.591 kb on - strand, within IAI46_16635 at 3484.786 kb on + strand, within IAI46_16635 at 3484.786 kb on + strand, within IAI46_16635 at 3484.787 kb on - strand, within IAI46_16635 at 3484.888 kb on + strand at 3484.890 kb on + strand at 3484.928 kb on + strand at 3484.928 kb on + strand at 3484.940 kb on - strand at 3484.945 kb on + strand at 3484.945 kb on + strand at 3484.945 kb on + strand at 3484.946 kb on - strand at 3484.946 kb on - strand at 3485.093 kb on + strand at 3485.094 kb on - strand at 3485.094 kb on - strand at 3485.100 kb on + strand at 3485.121 kb on + strand at 3485.127 kb on - strand at 3485.175 kb on + strand at 3485.268 kb on + strand at 3485.282 kb on + strand at 3485.283 kb on - strand at 3485.295 kb on - strand at 3485.307 kb on + strand at 3485.307 kb on + strand at 3485.308 kb on - strand at 3485.322 kb on - strand at 3485.342 kb on + strand at 3485.352 kb on - strand at 3485.352 kb on - strand at 3485.423 kb on + strand, within IAI46_16640 at 3485.441 kb on + strand, within IAI46_16640 at 3485.512 kb on + strand, within IAI46_16640 at 3485.512 kb on + strand, within IAI46_16640 at 3485.512 kb on + strand, within IAI46_16640 at 3485.513 kb on - strand, within IAI46_16640 at 3485.600 kb on + strand, within IAI46_16640 at 3485.615 kb on - strand, within IAI46_16640 at 3485.706 kb on + strand at 3485.789 kb on + strand at 3485.789 kb on + strand at 3485.790 kb on - strand at 3485.793 kb on + strand at 3485.793 kb on + strand at 3485.793 kb on + strand at 3485.794 kb on - strand at 3485.799 kb on - strand at 3485.858 kb on - strand at 3485.861 kb on + strand at 3485.861 kb on + strand at 3485.861 kb on + strand at 3485.862 kb on - strand at 3485.865 kb on - strand at 3485.865 kb on - strand at 3485.889 kb on - strand at 3485.946 kb on + strand, within IAI46_16645 at 3485.946 kb on + strand, within IAI46_16645 at 3485.946 kb on + strand, within IAI46_16645 at 3485.946 kb on + strand, within IAI46_16645 at 3485.947 kb on - strand, within IAI46_16645 at 3485.947 kb on - strand, within IAI46_16645 at 3486.032 kb on + strand, within IAI46_16645 at 3486.075 kb on - strand, within IAI46_16645 at 3486.118 kb on + strand, within IAI46_16645 at 3486.119 kb on - strand, within IAI46_16645 at 3486.119 kb on - strand, within IAI46_16645 at 3486.119 kb on - strand, within IAI46_16645 at 3486.122 kb on + strand, within IAI46_16645 at 3486.122 kb on + strand, within IAI46_16645 at 3486.123 kb on - strand, within IAI46_16645 at 3486.124 kb on + strand, within IAI46_16645 at 3486.124 kb on + strand, within IAI46_16645 at 3486.124 kb on + strand, within IAI46_16645 at 3486.124 kb on + strand, within IAI46_16645 at 3486.124 kb on + strand, within IAI46_16645 at 3486.124 kb on + strand, within IAI46_16645 at 3486.125 kb on - strand, within IAI46_16645 at 3486.125 kb on - strand, within IAI46_16645 at 3486.125 kb on - strand, within IAI46_16645 at 3486.125 kb on - strand, within IAI46_16645 at 3486.125 kb on - strand, within IAI46_16645 at 3486.173 kb on - strand, within IAI46_16645 at 3486.178 kb on + strand, within IAI46_16645 at 3486.219 kb on - strand, within IAI46_16645 at 3486.362 kb on + strand at 3486.363 kb on - strand at 3486.381 kb on + strand at 3486.382 kb on - strand at 3486.473 kb on + strand at 3486.502 kb on - strand at 3486.502 kb on - strand at 3486.502 kb on - strand at 3486.530 kb on + strand at 3486.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,484,398 + IAI46_16635 0.24 -0.4 3,484,398 + IAI46_16635 0.24 +1.1 3,484,410 + IAI46_16635 0.26 -0.9 3,484,410 + IAI46_16635 0.26 +0.2 3,484,467 + IAI46_16635 0.35 +0.1 3,484,468 - IAI46_16635 0.35 +0.2 3,484,468 - IAI46_16635 0.35 -0.9 3,484,591 - IAI46_16635 0.55 +0.4 3,484,786 + IAI46_16635 0.86 +0.5 3,484,786 + IAI46_16635 0.86 +0.8 3,484,787 - IAI46_16635 0.87 -1.0 3,484,888 + +0.1 3,484,890 + +0.6 3,484,928 + -0.5 3,484,928 + +0.7 3,484,940 - +0.3 3,484,945 + +0.7 3,484,945 + +0.2 3,484,945 + +0.3 3,484,946 - -0.2 3,484,946 - +0.1 3,485,093 + +1.4 3,485,094 - +0.5 3,485,094 - -0.2 3,485,100 + +0.5 3,485,121 + -0.5 3,485,127 - -0.4 3,485,175 + +0.3 3,485,268 + +1.1 3,485,282 + +0.2 3,485,283 - +0.3 3,485,295 - -1.3 3,485,307 + +0.4 3,485,307 + +1.0 3,485,308 - +0.0 3,485,322 - +0.3 3,485,342 + +0.1 3,485,352 - +0.1 3,485,352 - -0.3 3,485,423 + IAI46_16640 0.25 +0.1 3,485,441 + IAI46_16640 0.31 +0.0 3,485,512 + IAI46_16640 0.54 -0.5 3,485,512 + IAI46_16640 0.54 -0.5 3,485,512 + IAI46_16640 0.54 +0.7 3,485,513 - IAI46_16640 0.54 +0.5 3,485,600 + IAI46_16640 0.82 -1.1 3,485,615 - IAI46_16640 0.87 +0.8 3,485,706 + +0.6 3,485,789 + -0.5 3,485,789 + +0.0 3,485,790 - +0.4 3,485,793 + -0.5 3,485,793 + +0.5 3,485,793 + -0.6 3,485,794 - +0.8 3,485,799 - +0.1 3,485,858 - +1.3 3,485,861 + -0.2 3,485,861 + +1.5 3,485,861 + +0.2 3,485,862 - +0.6 3,485,865 - -0.2 3,485,865 - -0.4 3,485,889 - -0.1 3,485,946 + IAI46_16645 0.13 -0.2 3,485,946 + IAI46_16645 0.13 +0.7 3,485,946 + IAI46_16645 0.13 -1.2 3,485,946 + IAI46_16645 0.13 +0.5 3,485,947 - IAI46_16645 0.14 -0.8 3,485,947 - IAI46_16645 0.14 +0.4 3,486,032 + IAI46_16645 0.35 +0.1 3,486,075 - IAI46_16645 0.45 -0.3 3,486,118 + IAI46_16645 0.56 -0.7 3,486,119 - IAI46_16645 0.56 +0.2 3,486,119 - IAI46_16645 0.56 +0.5 3,486,119 - IAI46_16645 0.56 -0.3 3,486,122 + IAI46_16645 0.57 +0.1 3,486,122 + IAI46_16645 0.57 -0.4 3,486,123 - IAI46_16645 0.57 +0.1 3,486,124 + IAI46_16645 0.57 +0.4 3,486,124 + IAI46_16645 0.57 +0.4 3,486,124 + IAI46_16645 0.57 -0.7 3,486,124 + IAI46_16645 0.57 -1.3 3,486,124 + IAI46_16645 0.57 -0.2 3,486,124 + IAI46_16645 0.57 -0.9 3,486,125 - IAI46_16645 0.58 -0.7 3,486,125 - IAI46_16645 0.58 +0.5 3,486,125 - IAI46_16645 0.58 +0.1 3,486,125 - IAI46_16645 0.58 -0.7 3,486,125 - IAI46_16645 0.58 +0.2 3,486,173 - IAI46_16645 0.69 -0.3 3,486,178 + IAI46_16645 0.71 +0.5 3,486,219 - IAI46_16645 0.81 +0.3 3,486,362 + +0.5 3,486,363 - +1.1 3,486,381 + +0.9 3,486,382 - -0.1 3,486,473 + -0.1 3,486,502 - -0.2 3,486,502 - +0.3 3,486,502 - -1.0 3,486,530 + +1.1 3,486,531 - -0.3
Or see this region's nucleotide sequence