Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14440 and IAI46_14445 are separated by 62 nucleotides IAI46_14445 and IAI46_14450 are separated by 109 nucleotides IAI46_14450 and IAI46_14455 are separated by 3 nucleotides
IAI46_14440: IAI46_14440 - ABC transporter permease subunit, at 3,062,402 to 3,064,120
_14440
IAI46_14445: IAI46_14445 - 3'-5' exoribonuclease, at 3,064,183 to 3,064,743
_14445
IAI46_14450: IAI46_14450 - multidrug effflux MFS transporter, at 3,064,853 to 3,066,046
_14450
IAI46_14455: IAI46_14455 - catabolic alanine racemase DadX, at 3,066,050 to 3,067,123
_14455
Position (kb)
3064
3065
3066
3067 Strain fitness (log2 ratio)
-1
0
1 at 3063.860 kb on + strand, within IAI46_14440 at 3064.144 kb on - strand at 3064.147 kb on - strand at 3064.158 kb on + strand at 3064.220 kb on + strand at 3064.512 kb on + strand, within IAI46_14445 at 3064.690 kb on + strand at 3064.928 kb on - strand at 3065.045 kb on + strand, within IAI46_14450 at 3065.085 kb on - strand, within IAI46_14450 at 3065.343 kb on + strand, within IAI46_14450 at 3065.344 kb on - strand, within IAI46_14450 at 3065.344 kb on - strand, within IAI46_14450 at 3065.344 kb on - strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.349 kb on - strand, within IAI46_14450 at 3065.379 kb on + strand, within IAI46_14450 at 3065.520 kb on - strand, within IAI46_14450 at 3065.706 kb on + strand, within IAI46_14450 at 3065.706 kb on + strand, within IAI46_14450 at 3065.707 kb on - strand, within IAI46_14450 at 3065.766 kb on - strand, within IAI46_14450 at 3065.767 kb on + strand, within IAI46_14450 at 3065.768 kb on - strand, within IAI46_14450 at 3065.768 kb on - strand, within IAI46_14450 at 3065.973 kb on + strand at 3066.321 kb on - strand, within IAI46_14455 at 3066.430 kb on + strand, within IAI46_14455 at 3066.486 kb on + strand, within IAI46_14455 at 3066.486 kb on + strand, within IAI46_14455 at 3066.494 kb on + strand, within IAI46_14455 at 3066.495 kb on - strand, within IAI46_14455 at 3066.495 kb on - strand, within IAI46_14455 at 3066.495 kb on - strand, within IAI46_14455 at 3066.574 kb on + strand, within IAI46_14455 at 3066.575 kb on - strand, within IAI46_14455 at 3066.656 kb on + strand, within IAI46_14455 at 3066.673 kb on + strand, within IAI46_14455 at 3066.680 kb on + strand, within IAI46_14455 at 3066.681 kb on - strand, within IAI46_14455 at 3066.681 kb on - strand, within IAI46_14455 at 3066.928 kb on + strand, within IAI46_14455 at 3066.929 kb on - strand, within IAI46_14455 at 3066.995 kb on - strand, within IAI46_14455 at 3067.009 kb on - strand, within IAI46_14455
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,063,860 + IAI46_14440 0.85 -0.2 3,064,144 - +0.6 3,064,147 - +0.8 3,064,158 + +1.3 3,064,220 + +1.0 3,064,512 + IAI46_14445 0.59 -0.3 3,064,690 + +1.3 3,064,928 - +0.0 3,065,045 + IAI46_14450 0.16 +0.6 3,065,085 - IAI46_14450 0.19 -0.2 3,065,343 + IAI46_14450 0.41 -0.4 3,065,344 - IAI46_14450 0.41 +0.3 3,065,344 - IAI46_14450 0.41 +0.1 3,065,344 - IAI46_14450 0.41 -0.6 3,065,348 + IAI46_14450 0.41 +0.3 3,065,348 + IAI46_14450 0.41 +0.4 3,065,348 + IAI46_14450 0.41 -0.8 3,065,348 + IAI46_14450 0.41 -0.2 3,065,349 - IAI46_14450 0.42 +0.7 3,065,379 + IAI46_14450 0.44 +0.8 3,065,520 - IAI46_14450 0.56 +1.5 3,065,706 + IAI46_14450 0.71 +0.1 3,065,706 + IAI46_14450 0.71 +0.8 3,065,707 - IAI46_14450 0.72 -0.8 3,065,766 - IAI46_14450 0.76 +0.3 3,065,767 + IAI46_14450 0.77 +0.3 3,065,768 - IAI46_14450 0.77 -0.1 3,065,768 - IAI46_14450 0.77 -0.2 3,065,973 + +0.5 3,066,321 - IAI46_14455 0.25 +0.3 3,066,430 + IAI46_14455 0.35 +0.9 3,066,486 + IAI46_14455 0.41 +0.0 3,066,486 + IAI46_14455 0.41 -0.3 3,066,494 + IAI46_14455 0.41 +1.6 3,066,495 - IAI46_14455 0.41 -0.2 3,066,495 - IAI46_14455 0.41 -0.3 3,066,495 - IAI46_14455 0.41 +0.1 3,066,574 + IAI46_14455 0.49 -0.1 3,066,575 - IAI46_14455 0.49 -0.0 3,066,656 + IAI46_14455 0.56 -0.2 3,066,673 + IAI46_14455 0.58 -0.8 3,066,680 + IAI46_14455 0.59 -0.4 3,066,681 - IAI46_14455 0.59 +0.5 3,066,681 - IAI46_14455 0.59 -0.4 3,066,928 + IAI46_14455 0.82 -0.4 3,066,929 - IAI46_14455 0.82 +0.1 3,066,995 - IAI46_14455 0.88 +0.0 3,067,009 - IAI46_14455 0.89 +0.3
Or see this region's nucleotide sequence