Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13090 and IAI46_13095 overlap by 4 nucleotides IAI46_13095 and IAI46_13100 overlap by 8 nucleotides IAI46_13100 and IAI46_13105 are separated by 34 nucleotides
IAI46_13090: IAI46_13090 - ABC transporter ATP-binding protein, at 2,793,891 to 2,795,003
_13090
IAI46_13095: IAI46_13095 - ABC transporter ATP-binding protein, at 2,795,000 to 2,795,770
_13095
IAI46_13100: IAI46_13100 - ABC transporter ATP-binding protein, at 2,795,763 to 2,796,476
_13100
IAI46_13105: IAI46_13105 - branched-chain amino acid ABC transporter substrate-binding protein, at 2,796,511 to 2,797,671
_13105
Position (kb)
2794
2795
2796 Strain fitness (log2 ratio)
-1
0
1 at 2794.007 kb on + strand, within IAI46_13090 at 2794.008 kb on - strand, within IAI46_13090 at 2794.012 kb on - strand, within IAI46_13090 at 2794.044 kb on + strand, within IAI46_13090 at 2794.134 kb on + strand, within IAI46_13090 at 2794.220 kb on + strand, within IAI46_13090 at 2794.309 kb on - strand, within IAI46_13090 at 2794.309 kb on - strand, within IAI46_13090 at 2794.488 kb on + strand, within IAI46_13090 at 2794.497 kb on + strand, within IAI46_13090 at 2794.500 kb on + strand, within IAI46_13090 at 2794.500 kb on + strand, within IAI46_13090 at 2794.501 kb on - strand, within IAI46_13090 at 2794.535 kb on + strand, within IAI46_13090 at 2794.536 kb on - strand, within IAI46_13090 at 2794.999 kb on + strand at 2795.097 kb on - strand, within IAI46_13095 at 2795.414 kb on + strand, within IAI46_13095 at 2795.463 kb on - strand, within IAI46_13095 at 2795.715 kb on + strand at 2796.258 kb on - strand, within IAI46_13100 at 2796.385 kb on - strand, within IAI46_13100 at 2796.385 kb on - strand, within IAI46_13100 at 2796.521 kb on + strand at 2796.521 kb on + strand at 2796.522 kb on - strand at 2796.522 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,794,007 + IAI46_13090 0.10 +0.4 2,794,008 - IAI46_13090 0.11 +0.6 2,794,012 - IAI46_13090 0.11 -0.3 2,794,044 + IAI46_13090 0.14 -0.4 2,794,134 + IAI46_13090 0.22 -0.4 2,794,220 + IAI46_13090 0.30 -0.7 2,794,309 - IAI46_13090 0.38 +0.8 2,794,309 - IAI46_13090 0.38 +0.9 2,794,488 + IAI46_13090 0.54 +0.4 2,794,497 + IAI46_13090 0.54 +0.2 2,794,500 + IAI46_13090 0.55 +1.6 2,794,500 + IAI46_13090 0.55 +0.6 2,794,501 - IAI46_13090 0.55 +0.4 2,794,535 + IAI46_13090 0.58 -0.9 2,794,536 - IAI46_13090 0.58 +0.3 2,794,999 + +0.4 2,795,097 - IAI46_13095 0.13 -0.3 2,795,414 + IAI46_13095 0.54 -0.0 2,795,463 - IAI46_13095 0.60 -0.3 2,795,715 + -1.4 2,796,258 - IAI46_13100 0.69 +1.0 2,796,385 - IAI46_13100 0.87 +0.2 2,796,385 - IAI46_13100 0.87 +0.5 2,796,521 + +0.3 2,796,521 + -0.2 2,796,522 - +0.2 2,796,522 - +1.3
Or see this region's nucleotide sequence