Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12445 and IAI46_12450 are separated by 169 nucleotides IAI46_12450 and IAI46_12455 are separated by 24 nucleotides IAI46_12455 and IAI46_12460 overlap by 4 nucleotides IAI46_12460 and IAI46_12465 are separated by 42 nucleotides
IAI46_12445: IAI46_12445 - GMC family oxidoreductase N-terminal domain-containing protein, at 2,644,189 to 2,645,811
_12445
IAI46_12450: IAI46_12450 - SDR family oxidoreductase, at 2,645,981 to 2,646,760
_12450
IAI46_12455: IAI46_12455 - FCD domain-containing protein, at 2,646,785 to 2,647,525
_12455
IAI46_12460: IAI46_12460 - fumarylacetoacetate hydrolase family protein, at 2,647,522 to 2,648,367
_12460
IAI46_12465: IAI46_12465 - aldehyde dehydrogenase family protein, at 2,648,410 to 2,649,897
_12465
Position (kb)
2646
2647
2648 Strain fitness (log2 ratio)
-1
0
1 at 2645.787 kb on - strand at 2645.925 kb on + strand at 2645.925 kb on + strand at 2646.016 kb on - strand at 2646.177 kb on + strand, within IAI46_12450 at 2646.177 kb on + strand, within IAI46_12450 at 2646.242 kb on - strand, within IAI46_12450 at 2646.245 kb on - strand, within IAI46_12450 at 2646.706 kb on + strand at 2646.756 kb on + strand at 2647.060 kb on + strand, within IAI46_12455 at 2647.095 kb on + strand, within IAI46_12455 at 2647.443 kb on - strand, within IAI46_12455 at 2647.488 kb on + strand at 2647.654 kb on - strand, within IAI46_12460 at 2647.891 kb on + strand, within IAI46_12460 at 2647.982 kb on - strand, within IAI46_12460
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,645,787 - +0.2 2,645,925 + +1.3 2,645,925 + -1.7 2,646,016 - -0.1 2,646,177 + IAI46_12450 0.25 -0.2 2,646,177 + IAI46_12450 0.25 +0.7 2,646,242 - IAI46_12450 0.33 +0.2 2,646,245 - IAI46_12450 0.34 +0.3 2,646,706 + +0.5 2,646,756 + -1.4 2,647,060 + IAI46_12455 0.37 +0.4 2,647,095 + IAI46_12455 0.42 -0.2 2,647,443 - IAI46_12455 0.89 -0.8 2,647,488 + +0.6 2,647,654 - IAI46_12460 0.16 -0.1 2,647,891 + IAI46_12460 0.44 +0.3 2,647,982 - IAI46_12460 0.54 +0.8
Or see this region's nucleotide sequence