Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11970 and IAI46_11975 are separated by 277 nucleotides IAI46_11975 and IAI46_11980 are separated by 177 nucleotides
IAI46_11970: IAI46_11970 - cytochrome c, at 2,534,783 to 2,536,018
_11970
IAI46_11975: IAI46_11975 - DMT family transporter, at 2,536,296 to 2,537,201
_11975
IAI46_11980: IAI46_11980 - helix-turn-helix transcriptional regulator, at 2,537,379 to 2,538,248
_11980
Position (kb)
2536
2537
2538 Strain fitness (log2 ratio)
-2
-1
0
1 at 2535.313 kb on - strand, within IAI46_11970 at 2535.347 kb on - strand, within IAI46_11970 at 2535.374 kb on - strand, within IAI46_11970 at 2535.374 kb on - strand, within IAI46_11970 at 2535.543 kb on + strand, within IAI46_11970 at 2535.575 kb on - strand, within IAI46_11970 at 2535.675 kb on + strand, within IAI46_11970 at 2535.675 kb on + strand, within IAI46_11970 at 2535.675 kb on + strand, within IAI46_11970 at 2535.676 kb on - strand, within IAI46_11970 at 2535.712 kb on - strand, within IAI46_11970 at 2536.052 kb on - strand at 2536.120 kb on - strand at 2536.291 kb on + strand at 2536.292 kb on - strand at 2536.292 kb on - strand at 2536.417 kb on + strand, within IAI46_11975 at 2536.507 kb on + strand, within IAI46_11975 at 2536.636 kb on + strand, within IAI46_11975 at 2536.648 kb on + strand, within IAI46_11975 at 2536.648 kb on + strand, within IAI46_11975 at 2536.648 kb on + strand, within IAI46_11975 at 2536.649 kb on - strand, within IAI46_11975 at 2536.653 kb on - strand, within IAI46_11975 at 2536.653 kb on - strand, within IAI46_11975 at 2536.724 kb on - strand, within IAI46_11975 at 2536.875 kb on - strand, within IAI46_11975 at 2536.943 kb on - strand, within IAI46_11975 at 2536.943 kb on - strand, within IAI46_11975 at 2536.958 kb on - strand, within IAI46_11975 at 2537.031 kb on - strand, within IAI46_11975 at 2537.073 kb on + strand, within IAI46_11975 at 2537.186 kb on - strand at 2537.186 kb on - strand at 2537.186 kb on - strand at 2537.202 kb on - strand at 2537.326 kb on - strand at 2537.389 kb on - strand at 2537.389 kb on - strand at 2537.417 kb on + strand at 2537.417 kb on + strand at 2537.493 kb on - strand, within IAI46_11980 at 2537.519 kb on + strand, within IAI46_11980 at 2537.520 kb on - strand, within IAI46_11980 at 2537.556 kb on + strand, within IAI46_11980 at 2537.674 kb on - strand, within IAI46_11980 at 2537.678 kb on + strand, within IAI46_11980 at 2537.679 kb on - strand, within IAI46_11980 at 2537.993 kb on - strand, within IAI46_11980
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,535,313 - IAI46_11970 0.43 +0.2 2,535,347 - IAI46_11970 0.46 +1.4 2,535,374 - IAI46_11970 0.48 +0.4 2,535,374 - IAI46_11970 0.48 +0.3 2,535,543 + IAI46_11970 0.61 +0.3 2,535,575 - IAI46_11970 0.64 -0.5 2,535,675 + IAI46_11970 0.72 +0.8 2,535,675 + IAI46_11970 0.72 +0.5 2,535,675 + IAI46_11970 0.72 +0.3 2,535,676 - IAI46_11970 0.72 +0.5 2,535,712 - IAI46_11970 0.75 -1.1 2,536,052 - -0.3 2,536,120 - -0.1 2,536,291 + +0.6 2,536,292 - +0.2 2,536,292 - +0.6 2,536,417 + IAI46_11975 0.13 +0.8 2,536,507 + IAI46_11975 0.23 -0.1 2,536,636 + IAI46_11975 0.38 -0.6 2,536,648 + IAI46_11975 0.39 +1.7 2,536,648 + IAI46_11975 0.39 -0.1 2,536,648 + IAI46_11975 0.39 -0.4 2,536,649 - IAI46_11975 0.39 +0.9 2,536,653 - IAI46_11975 0.39 -0.1 2,536,653 - IAI46_11975 0.39 -2.4 2,536,724 - IAI46_11975 0.47 +0.2 2,536,875 - IAI46_11975 0.64 +0.6 2,536,943 - IAI46_11975 0.71 -0.3 2,536,943 - IAI46_11975 0.71 +0.0 2,536,958 - IAI46_11975 0.73 -0.8 2,537,031 - IAI46_11975 0.81 +0.2 2,537,073 + IAI46_11975 0.86 +0.3 2,537,186 - +0.4 2,537,186 - +0.8 2,537,186 - +0.6 2,537,202 - +0.7 2,537,326 - +1.2 2,537,389 - +0.4 2,537,389 - -1.2 2,537,417 + +0.2 2,537,417 + +0.4 2,537,493 - IAI46_11980 0.13 -0.1 2,537,519 + IAI46_11980 0.16 +0.2 2,537,520 - IAI46_11980 0.16 -0.3 2,537,556 + IAI46_11980 0.20 +0.6 2,537,674 - IAI46_11980 0.34 +0.2 2,537,678 + IAI46_11980 0.34 +0.8 2,537,679 - IAI46_11980 0.34 -1.4 2,537,993 - IAI46_11980 0.71 +0.2
Or see this region's nucleotide sequence