Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11680 and IAI46_11685 are separated by 159 nucleotides IAI46_11685 and IAI46_11690 are separated by 152 nucleotides IAI46_11690 and IAI46_11695 overlap by 4 nucleotides
IAI46_11680: IAI46_11680 - LysR family transcriptional regulator, at 2,465,059 to 2,465,949
_11680
IAI46_11685: IAI46_11685 - ROK family transcriptional regulator, at 2,466,109 to 2,467,326
_11685
IAI46_11690: IAI46_11690 - ATP-dependent dethiobiotin synthetase BioD, at 2,467,479 to 2,468,150
_11690
IAI46_11695: IAI46_11695 - voltage-gated ClC-type chloride channel ClcB, at 2,468,147 to 2,469,427
_11695
Position (kb)
2466
2467
2468 Strain fitness (log2 ratio)
-2
-1
0
1 at 2465.373 kb on + strand, within IAI46_11680 at 2465.725 kb on + strand, within IAI46_11680 at 2465.725 kb on + strand, within IAI46_11680 at 2465.726 kb on - strand, within IAI46_11680 at 2465.726 kb on - strand, within IAI46_11680 at 2465.795 kb on + strand, within IAI46_11680 at 2466.435 kb on - strand, within IAI46_11685 at 2466.435 kb on - strand, within IAI46_11685 at 2466.616 kb on + strand, within IAI46_11685 at 2466.630 kb on + strand, within IAI46_11685 at 2466.630 kb on + strand, within IAI46_11685 at 2466.630 kb on + strand, within IAI46_11685 at 2466.719 kb on + strand, within IAI46_11685 at 2467.044 kb on + strand, within IAI46_11685 at 2467.044 kb on + strand, within IAI46_11685 at 2467.215 kb on + strand at 2467.289 kb on - strand at 2467.289 kb on - strand at 2467.302 kb on - strand at 2467.341 kb on - strand at 2467.345 kb on - strand at 2467.460 kb on - strand at 2467.460 kb on - strand at 2467.460 kb on - strand at 2467.474 kb on - strand at 2467.474 kb on - strand at 2467.637 kb on + strand, within IAI46_11690 at 2467.638 kb on - strand, within IAI46_11690 at 2467.752 kb on + strand, within IAI46_11690 at 2467.752 kb on + strand, within IAI46_11690 at 2467.753 kb on - strand, within IAI46_11690 at 2467.910 kb on + strand, within IAI46_11690 at 2467.911 kb on - strand, within IAI46_11690 at 2468.020 kb on - strand, within IAI46_11690 at 2468.118 kb on + strand at 2468.239 kb on - strand at 2468.314 kb on + strand, within IAI46_11695
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,465,373 + IAI46_11680 0.35 +1.1 2,465,725 + IAI46_11680 0.75 +0.5 2,465,725 + IAI46_11680 0.75 +0.8 2,465,726 - IAI46_11680 0.75 +0.1 2,465,726 - IAI46_11680 0.75 -1.6 2,465,795 + IAI46_11680 0.83 -0.2 2,466,435 - IAI46_11685 0.27 +0.2 2,466,435 - IAI46_11685 0.27 +0.6 2,466,616 + IAI46_11685 0.42 +0.5 2,466,630 + IAI46_11685 0.43 +0.4 2,466,630 + IAI46_11685 0.43 +0.3 2,466,630 + IAI46_11685 0.43 +0.7 2,466,719 + IAI46_11685 0.50 -0.1 2,467,044 + IAI46_11685 0.77 -0.1 2,467,044 + IAI46_11685 0.77 +0.5 2,467,215 + -0.2 2,467,289 - -1.1 2,467,289 - -1.2 2,467,302 - -0.4 2,467,341 - +0.6 2,467,345 - +0.1 2,467,460 - +0.2 2,467,460 - -0.3 2,467,460 - +0.7 2,467,474 - +1.6 2,467,474 - +0.5 2,467,637 + IAI46_11690 0.24 -1.1 2,467,638 - IAI46_11690 0.24 -1.3 2,467,752 + IAI46_11690 0.41 +0.9 2,467,752 + IAI46_11690 0.41 +0.6 2,467,753 - IAI46_11690 0.41 +0.2 2,467,910 + IAI46_11690 0.64 +0.4 2,467,911 - IAI46_11690 0.64 -2.0 2,468,020 - IAI46_11690 0.81 -0.7 2,468,118 + -0.8 2,468,239 - -0.3 2,468,314 + IAI46_11695 0.13 +0.9
Or see this region's nucleotide sequence