Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09985 and IAI46_09990 are separated by 172 nucleotides IAI46_09990 and IAI46_09995 are separated by 30 nucleotides IAI46_09995 and IAI46_10000 are separated by 372 nucleotides
IAI46_09985: IAI46_09985 - RNA polymerase-binding protein DksA, at 2,111,724 to 2,112,149
_09985
IAI46_09990: IAI46_09990 - prolyl aminopeptidase, at 2,112,322 to 2,113,275
_09990
IAI46_09995: IAI46_09995 - DNA polymerase III subunit theta, at 2,113,306 to 2,113,536
_09995
IAI46_10000: IAI46_10000 - non-heme ferritin, at 2,113,909 to 2,114,427
_10000
Position (kb)
2112
2113
2114 Strain fitness (log2 ratio)
-2
-1
0
1 at 2111.398 kb on - strand at 2111.398 kb on - strand at 2111.404 kb on - strand at 2111.410 kb on - strand at 2111.421 kb on + strand at 2111.524 kb on + strand at 2111.545 kb on + strand at 2111.585 kb on - strand at 2111.624 kb on + strand at 2111.782 kb on - strand, within IAI46_09985 at 2112.006 kb on + strand, within IAI46_09985 at 2112.007 kb on - strand, within IAI46_09985 at 2112.018 kb on + strand, within IAI46_09985 at 2112.048 kb on - strand, within IAI46_09985 at 2112.048 kb on - strand, within IAI46_09985 at 2112.198 kb on + strand at 2112.223 kb on - strand at 2112.239 kb on + strand at 2112.240 kb on - strand at 2112.333 kb on - strand at 2112.353 kb on + strand at 2112.361 kb on + strand at 2112.361 kb on + strand at 2112.361 kb on + strand at 2112.361 kb on + strand at 2112.362 kb on - strand at 2112.362 kb on - strand at 2112.403 kb on + strand at 2112.518 kb on + strand, within IAI46_09990 at 2112.519 kb on - strand, within IAI46_09990 at 2112.738 kb on + strand, within IAI46_09990 at 2112.769 kb on + strand, within IAI46_09990 at 2112.769 kb on + strand, within IAI46_09990 at 2112.769 kb on + strand, within IAI46_09990 at 2112.770 kb on - strand, within IAI46_09990 at 2113.030 kb on - strand, within IAI46_09990 at 2113.092 kb on + strand, within IAI46_09990 at 2113.120 kb on + strand, within IAI46_09990 at 2113.188 kb on + strand at 2113.188 kb on + strand at 2113.188 kb on + strand at 2113.189 kb on - strand at 2113.241 kb on + strand at 2113.341 kb on - strand, within IAI46_09995 at 2113.445 kb on + strand, within IAI46_09995 at 2113.529 kb on + strand at 2113.530 kb on - strand at 2113.539 kb on + strand at 2113.548 kb on + strand at 2113.580 kb on - strand at 2113.664 kb on - strand at 2113.864 kb on - strand at 2113.964 kb on - strand, within IAI46_10000 at 2113.979 kb on - strand, within IAI46_10000 at 2114.179 kb on + strand, within IAI46_10000 at 2114.211 kb on + strand, within IAI46_10000 at 2114.212 kb on - strand, within IAI46_10000 at 2114.248 kb on + strand, within IAI46_10000 at 2114.248 kb on + strand, within IAI46_10000 at 2114.249 kb on - strand, within IAI46_10000
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,111,398 - -0.3 2,111,398 - +0.1 2,111,404 - +0.6 2,111,410 - +1.1 2,111,421 + +0.2 2,111,524 + +0.5 2,111,545 + +1.4 2,111,585 - +0.2 2,111,624 + -0.4 2,111,782 - IAI46_09985 0.14 -1.7 2,112,006 + IAI46_09985 0.66 +0.7 2,112,007 - IAI46_09985 0.66 +0.2 2,112,018 + IAI46_09985 0.69 -0.4 2,112,048 - IAI46_09985 0.76 -0.6 2,112,048 - IAI46_09985 0.76 +1.2 2,112,198 + +0.5 2,112,223 - +1.0 2,112,239 + +1.5 2,112,240 - +0.1 2,112,333 - -0.3 2,112,353 + +0.5 2,112,361 + -0.8 2,112,361 + -0.8 2,112,361 + -0.1 2,112,361 + -0.6 2,112,362 - +1.5 2,112,362 - -1.0 2,112,403 + -0.4 2,112,518 + IAI46_09990 0.21 -1.9 2,112,519 - IAI46_09990 0.21 -0.3 2,112,738 + IAI46_09990 0.44 +0.5 2,112,769 + IAI46_09990 0.47 +1.4 2,112,769 + IAI46_09990 0.47 +0.4 2,112,769 + IAI46_09990 0.47 -0.4 2,112,770 - IAI46_09990 0.47 +1.0 2,113,030 - IAI46_09990 0.74 -0.8 2,113,092 + IAI46_09990 0.81 -0.2 2,113,120 + IAI46_09990 0.84 -0.5 2,113,188 + +0.0 2,113,188 + +0.7 2,113,188 + -0.8 2,113,189 - +0.3 2,113,241 + -1.2 2,113,341 - IAI46_09995 0.15 -0.1 2,113,445 + IAI46_09995 0.60 +0.9 2,113,529 + -0.4 2,113,530 - +0.9 2,113,539 + -1.9 2,113,548 + -0.7 2,113,580 - -0.6 2,113,664 - -0.2 2,113,864 - -0.3 2,113,964 - IAI46_10000 0.11 -0.1 2,113,979 - IAI46_10000 0.13 -2.3 2,114,179 + IAI46_10000 0.52 +0.0 2,114,211 + IAI46_10000 0.58 +0.7 2,114,212 - IAI46_10000 0.58 +0.4 2,114,248 + IAI46_10000 0.65 +0.2 2,114,248 + IAI46_10000 0.65 +1.0 2,114,249 - IAI46_10000 0.66 +0.9
Or see this region's nucleotide sequence