Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09930 and IAI46_09935 are separated by 296 nucleotides IAI46_09935 and IAI46_09940 are separated by 158 nucleotides IAI46_09940 and IAI46_09945 are separated by 392 nucleotides
IAI46_09930: IAI46_09930 - efflux RND transporter periplasmic adaptor subunit, at 2,100,633 to 2,101,820
_09930
IAI46_09935: IAI46_09935 - helix-turn-helix domain-containing protein, at 2,102,117 to 2,102,473
_09935
IAI46_09940: IAI46_09940 - tRNA-Ser, at 2,102,632 to 2,102,721
_09940
IAI46_09945: IAI46_09945 - tRNA-Ser, at 2,103,114 to 2,103,203
_09945
Position (kb)
2102
2103 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.144 kb on + strand, within IAI46_09930 at 2101.145 kb on - strand, within IAI46_09930 at 2101.145 kb on - strand, within IAI46_09930 at 2101.145 kb on - strand, within IAI46_09930 at 2101.279 kb on - strand, within IAI46_09930 at 2101.360 kb on - strand, within IAI46_09930 at 2101.487 kb on + strand, within IAI46_09930 at 2101.488 kb on - strand, within IAI46_09930 at 2101.498 kb on - strand, within IAI46_09930 at 2101.502 kb on + strand, within IAI46_09930 at 2101.502 kb on + strand, within IAI46_09930 at 2101.543 kb on + strand, within IAI46_09930 at 2101.544 kb on - strand, within IAI46_09930 at 2101.562 kb on - strand, within IAI46_09930 at 2101.617 kb on - strand, within IAI46_09930 at 2101.967 kb on - strand at 2101.972 kb on - strand at 2101.985 kb on - strand at 2102.002 kb on + strand at 2102.003 kb on - strand at 2102.068 kb on - strand at 2102.090 kb on - strand at 2102.123 kb on - strand at 2102.123 kb on - strand at 2102.135 kb on - strand at 2102.135 kb on - strand at 2102.236 kb on + strand, within IAI46_09935 at 2102.237 kb on - strand, within IAI46_09935 at 2102.273 kb on + strand, within IAI46_09935 at 2102.274 kb on - strand, within IAI46_09935 at 2102.275 kb on + strand, within IAI46_09935 at 2102.529 kb on + strand at 2102.762 kb on - strand at 2102.762 kb on - strand at 2102.762 kb on - strand at 2102.764 kb on + strand at 2102.765 kb on - strand at 2102.765 kb on - strand at 2102.765 kb on - strand at 2102.765 kb on - strand at 2102.767 kb on - strand at 2102.767 kb on - strand at 2103.045 kb on - strand at 2103.064 kb on + strand at 2103.246 kb on - strand at 2103.251 kb on - strand at 2103.288 kb on + strand at 2103.289 kb on - strand at 2103.307 kb on - strand at 2103.433 kb on + strand at 2103.434 kb on - strand at 2103.435 kb on + strand at 2103.436 kb on - strand at 2103.455 kb on - strand at 2103.455 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,101,144 + IAI46_09930 0.43 -0.0 2,101,144 + IAI46_09930 0.43 +0.7 2,101,144 + IAI46_09930 0.43 -0.2 2,101,144 + IAI46_09930 0.43 -0.8 2,101,144 + IAI46_09930 0.43 +0.9 2,101,144 + IAI46_09930 0.43 +0.2 2,101,144 + IAI46_09930 0.43 +0.5 2,101,144 + IAI46_09930 0.43 -3.2 2,101,144 + IAI46_09930 0.43 +0.4 2,101,145 - IAI46_09930 0.43 +0.2 2,101,145 - IAI46_09930 0.43 -0.3 2,101,145 - IAI46_09930 0.43 -0.2 2,101,279 - IAI46_09930 0.54 -0.2 2,101,360 - IAI46_09930 0.61 +1.4 2,101,487 + IAI46_09930 0.72 +0.0 2,101,488 - IAI46_09930 0.72 +0.5 2,101,498 - IAI46_09930 0.73 +0.9 2,101,502 + IAI46_09930 0.73 +0.3 2,101,502 + IAI46_09930 0.73 -0.5 2,101,543 + IAI46_09930 0.77 +0.0 2,101,544 - IAI46_09930 0.77 +0.7 2,101,562 - IAI46_09930 0.78 -0.3 2,101,617 - IAI46_09930 0.83 +0.2 2,101,967 - -0.5 2,101,972 - +1.1 2,101,985 - -2.1 2,102,002 + -1.7 2,102,003 - -0.9 2,102,068 - -0.2 2,102,090 - -1.3 2,102,123 - -0.1 2,102,123 - -0.3 2,102,135 - +0.6 2,102,135 - +0.2 2,102,236 + IAI46_09935 0.33 -1.0 2,102,237 - IAI46_09935 0.34 +0.3 2,102,273 + IAI46_09935 0.44 -0.4 2,102,274 - IAI46_09935 0.44 +0.3 2,102,275 + IAI46_09935 0.44 +0.9 2,102,529 + +0.3 2,102,762 - -0.4 2,102,762 - +0.0 2,102,762 - +1.0 2,102,764 + -0.5 2,102,765 - -0.8 2,102,765 - -1.7 2,102,765 - -0.2 2,102,765 - +0.3 2,102,767 - +1.0 2,102,767 - -0.6 2,103,045 - -0.1 2,103,064 + -0.7 2,103,246 - -0.5 2,103,251 - -0.1 2,103,288 + -0.3 2,103,289 - +0.5 2,103,307 - +0.7 2,103,433 + +0.1 2,103,434 - -0.6 2,103,435 + -0.2 2,103,436 - -0.7 2,103,455 - +0.3 2,103,455 - -0.2
Or see this region's nucleotide sequence