Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08155 and IAI46_08160 are separated by 137 nucleotides IAI46_08160 and IAI46_08165 are separated by 203 nucleotides
IAI46_08155: IAI46_08155 - polysaccharide pyruvyl transferase family protein, at 1,734,526 to 1,735,716
_08155
IAI46_08160: IAI46_08160 - NADP-dependent phosphogluconate dehydrogenase, at 1,735,854 to 1,737,260
_08160
IAI46_08165: IAI46_08165 - glycosyltransferase, at 1,737,464 to 1,739,353
_08165
Position (kb)
1735
1736
1737
1738 Strain fitness (log2 ratio)
-2
-1
0
1 at 1734.873 kb on + strand, within IAI46_08155 at 1734.888 kb on + strand, within IAI46_08155 at 1734.910 kb on + strand, within IAI46_08155 at 1734.911 kb on - strand, within IAI46_08155 at 1734.947 kb on + strand, within IAI46_08155 at 1734.991 kb on + strand, within IAI46_08155 at 1735.096 kb on + strand, within IAI46_08155 at 1735.096 kb on + strand, within IAI46_08155 at 1735.098 kb on + strand, within IAI46_08155 at 1735.103 kb on + strand, within IAI46_08155 at 1735.219 kb on - strand, within IAI46_08155 at 1735.245 kb on + strand, within IAI46_08155 at 1735.250 kb on + strand, within IAI46_08155 at 1735.537 kb on + strand, within IAI46_08155 at 1735.559 kb on + strand, within IAI46_08155 at 1735.559 kb on + strand, within IAI46_08155 at 1735.560 kb on - strand, within IAI46_08155 at 1735.560 kb on - strand, within IAI46_08155 at 1735.635 kb on - strand at 1735.637 kb on + strand at 1735.722 kb on + strand at 1735.734 kb on + strand at 1735.735 kb on - strand at 1735.781 kb on - strand at 1735.932 kb on + strand at 1736.451 kb on + strand, within IAI46_08160 at 1737.192 kb on + strand at 1737.235 kb on + strand at 1737.329 kb on + strand at 1737.329 kb on + strand at 1737.348 kb on + strand at 1737.355 kb on - strand at 1737.371 kb on + strand at 1737.550 kb on - strand at 1737.756 kb on + strand, within IAI46_08165 at 1737.982 kb on + strand, within IAI46_08165 at 1738.148 kb on - strand, within IAI46_08165 at 1738.161 kb on - strand, within IAI46_08165 at 1738.211 kb on - strand, within IAI46_08165
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 1,734,873 + IAI46_08155 0.29 -2.3 1,734,888 + IAI46_08155 0.30 +0.4 1,734,910 + IAI46_08155 0.32 +0.5 1,734,911 - IAI46_08155 0.32 +0.9 1,734,947 + IAI46_08155 0.35 +1.1 1,734,991 + IAI46_08155 0.39 +0.6 1,735,096 + IAI46_08155 0.48 +0.4 1,735,096 + IAI46_08155 0.48 -1.4 1,735,098 + IAI46_08155 0.48 +0.3 1,735,103 + IAI46_08155 0.48 +0.3 1,735,219 - IAI46_08155 0.58 +0.6 1,735,245 + IAI46_08155 0.60 +1.5 1,735,250 + IAI46_08155 0.61 -1.5 1,735,537 + IAI46_08155 0.85 +0.3 1,735,559 + IAI46_08155 0.87 -0.4 1,735,559 + IAI46_08155 0.87 +0.4 1,735,560 - IAI46_08155 0.87 +0.5 1,735,560 - IAI46_08155 0.87 -0.1 1,735,635 - +0.6 1,735,637 + +0.1 1,735,722 + +0.1 1,735,734 + +1.4 1,735,735 - -0.2 1,735,781 - -0.2 1,735,932 + +0.6 1,736,451 + IAI46_08160 0.42 -0.7 1,737,192 + +0.6 1,737,235 + +1.2 1,737,329 + -0.6 1,737,329 + +1.1 1,737,348 + +0.5 1,737,355 - -0.3 1,737,371 + -0.4 1,737,550 - -0.2 1,737,756 + IAI46_08165 0.15 +1.0 1,737,982 + IAI46_08165 0.27 +0.6 1,738,148 - IAI46_08165 0.36 +0.4 1,738,161 - IAI46_08165 0.37 -0.4 1,738,211 - IAI46_08165 0.40 +0.4
Or see this region's nucleotide sequence