Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03180 and IAI46_03185 are separated by 433 nucleotides IAI46_03185 and IAI46_03190 are separated by 470 nucleotides
IAI46_03180: IAI46_03180 - FadR family transcriptional regulator, at 681,408 to 682,139
_03180
IAI46_03185: IAI46_03185 - 4-hydroxy-tetrahydrodipicolinate reductase, at 682,573 to 683,394
_03185
IAI46_03190: IAI46_03190 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 683,865 to 685,013
_03190
Position (kb) 682
683
684 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 681.573 kb on - strand, within IAI46_03180 at 681.889 kb on - strand, within IAI46_03180 at 681.889 kb on - strand, within IAI46_03180 at 681.997 kb on - strand, within IAI46_03180 at 682.155 kb on - strand at 682.155 kb on - strand at 682.159 kb on - strand at 682.159 kb on - strand at 682.177 kb on + strand at 682.179 kb on + strand at 682.179 kb on + strand at 682.179 kb on + strand at 682.179 kb on + strand at 682.179 kb on + strand at 682.180 kb on - strand at 682.182 kb on + strand at 682.182 kb on + strand at 682.182 kb on + strand at 682.182 kb on + strand at 682.183 kb on - strand at 682.183 kb on - strand at 682.183 kb on - strand at 682.183 kb on - strand at 682.187 kb on + strand at 682.187 kb on + strand at 682.188 kb on - strand at 682.276 kb on + strand at 682.276 kb on + strand at 682.276 kb on + strand at 682.277 kb on - strand at 682.280 kb on + strand at 682.332 kb on + strand at 682.395 kb on - strand at 682.423 kb on + strand at 682.423 kb on + strand at 682.432 kb on + strand at 682.444 kb on + strand at 682.480 kb on + strand at 682.488 kb on + strand at 682.488 kb on + strand at 683.427 kb on + strand at 683.547 kb on + strand at 683.548 kb on - strand at 683.558 kb on + strand at 683.559 kb on - strand at 683.559 kb on - strand at 683.559 kb on - strand at 683.573 kb on - strand at 683.636 kb on + strand at 683.669 kb on - strand at 683.680 kb on + strand at 683.681 kb on - strand at 683.804 kb on + strand at 683.805 kb on - strand at 683.937 kb on - strand at 683.963 kb on + strand at 683.963 kb on + strand at 683.964 kb on - strand at 683.980 kb on - strand, within IAI46_03190 at 684.029 kb on + strand, within IAI46_03190 at 684.029 kb on + strand, within IAI46_03190 at 684.030 kb on - strand, within IAI46_03190 at 684.030 kb on - strand, within IAI46_03190 at 684.030 kb on - strand, within IAI46_03190 at 684.034 kb on - strand, within IAI46_03190 at 684.034 kb on - strand, within IAI46_03190 at 684.034 kb on - strand, within IAI46_03190 at 684.042 kb on - strand, within IAI46_03190 at 684.089 kb on - strand, within IAI46_03190 at 684.089 kb on - strand, within IAI46_03190 at 684.351 kb on - strand, within IAI46_03190 at 684.366 kb on + strand, within IAI46_03190 at 684.366 kb on + strand, within IAI46_03190 at 684.366 kb on + strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190 at 684.367 kb on - strand, within IAI46_03190
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 681,573 - IAI46_03180 0.23 +0.4 681,889 - IAI46_03180 0.66 +0.0 681,889 - IAI46_03180 0.66 +0.3 681,997 - IAI46_03180 0.80 -0.3 682,155 - +1.1 682,155 - +0.8 682,159 - +0.2 682,159 - -0.2 682,177 + -0.0 682,179 + -0.1 682,179 + +0.0 682,179 + +0.6 682,179 + -0.1 682,179 + -1.2 682,180 - +0.5 682,182 + +0.5 682,182 + +0.3 682,182 + +0.9 682,182 + +0.8 682,183 - -0.3 682,183 - -0.7 682,183 - +0.2 682,183 - -0.9 682,187 + -0.8 682,187 + +0.3 682,188 - +0.0 682,276 + +0.2 682,276 + +1.0 682,276 + +0.3 682,277 - +0.5 682,280 + -1.9 682,332 + +0.0 682,395 - -0.5 682,423 + -0.6 682,423 + +1.1 682,432 + +0.7 682,444 + -0.5 682,480 + +0.2 682,488 + +1.9 682,488 + -0.4 683,427 + +0.0 683,547 + +0.2 683,548 - -0.5 683,558 + -0.0 683,559 - +1.2 683,559 - -0.5 683,559 - +0.3 683,573 - +1.3 683,636 + -0.6 683,669 - +1.0 683,680 + -0.5 683,681 - +0.2 683,804 + -0.1 683,805 - -2.7 683,937 - -0.3 683,963 + -2.4 683,963 + -2.5 683,964 - -1.5 683,980 - IAI46_03190 0.10 -1.4 684,029 + IAI46_03190 0.14 -2.7 684,029 + IAI46_03190 0.14 -1.8 684,030 - IAI46_03190 0.14 -1.2 684,030 - IAI46_03190 0.14 -2.6 684,030 - IAI46_03190 0.14 -2.7 684,034 - IAI46_03190 0.15 -1.7 684,034 - IAI46_03190 0.15 -2.1 684,034 - IAI46_03190 0.15 -2.0 684,042 - IAI46_03190 0.15 -1.1 684,089 - IAI46_03190 0.19 -2.5 684,089 - IAI46_03190 0.19 -0.1 684,351 - IAI46_03190 0.42 -3.1 684,366 + IAI46_03190 0.44 -2.5 684,366 + IAI46_03190 0.44 -2.2 684,366 + IAI46_03190 0.44 -2.1 684,367 - IAI46_03190 0.44 -1.3 684,367 - IAI46_03190 0.44 -1.2 684,367 - IAI46_03190 0.44 -1.1 684,367 - IAI46_03190 0.44 -1.9
Or see this region's nucleotide sequence