Strain Fitness in Serratia liquefaciens MT49 around IAI46_01900

Experiment: dichromate 20 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_01895 and IAI46_01900 are separated by 92 nucleotidesIAI46_01900 and IAI46_01905 are separated by 7 nucleotides IAI46_01895: IAI46_01895 - ATP-dependent zinc metalloprotease FtsH, at 406,521 to 408,452 _01895 IAI46_01900: IAI46_01900 - dihydropteroate synthase, at 408,545 to 409,378 _01900 IAI46_01905: IAI46_01905 - phosphoglucosamine mutase, at 409,386 to 410,723 _01905 Position (kb) 408 409 410Strain fitness (log2 ratio) -1 0 1at 408.425 kb on + strandat 408.425 kb on + strandat 408.425 kb on + strandat 408.450 kb on + strandat 408.450 kb on + strandat 408.450 kb on + strandat 408.450 kb on + strandat 408.451 kb on - strandat 408.464 kb on + strandat 408.464 kb on + strandat 408.464 kb on + strandat 408.465 kb on - strandat 408.467 kb on + strandat 408.467 kb on + strandat 408.467 kb on + strandat 408.468 kb on - strandat 408.468 kb on - strandat 408.530 kb on + strandat 408.530 kb on + strandat 408.540 kb on + strandat 408.540 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic
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408,425 + -0.8
408,425 + +0.1
408,425 + -1.0
408,450 + +0.2
408,450 + -0.7
408,450 + -0.2
408,450 + +1.3
408,451 - -1.1
408,464 + -0.1
408,464 + +0.9
408,464 + -0.4
408,465 - -0.5
408,467 + +1.3
408,467 + +0.1
408,467 + +0.1
408,468 - -1.0
408,468 - -0.6
408,530 + +0.5
408,530 + +0.8
408,540 + -0.7
408,540 + -0.8

Or see this region's nucleotide sequence