Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3707 and EX28DRAFT_3708 are separated by 536 nucleotides EX28DRAFT_3708 and EX28DRAFT_3709 are separated by 7 nucleotides EX28DRAFT_3709 and EX28DRAFT_3710 are separated by 3 nucleotides
EX28DRAFT_3707: EX28DRAFT_3707 - Gamma-aminobutyrate permease and related permeases, at 377,452 to 378,822
_3707
EX28DRAFT_3708: EX28DRAFT_3708 - Transcriptional regulators, at 379,359 to 380,123
_3708
EX28DRAFT_3709: EX28DRAFT_3709 - RNA, at 380,131 to 380,243
_3709
EX28DRAFT_3710: EX28DRAFT_3710 - pyruvate dehydrogenase E1 component, homodimeric type, at 380,247 to 382,910
_3710
Position (kb) 379
380
381 Strain fitness (log2 ratio) -2
-1
0
1 at 378.414 kb on + strand, within EX28DRAFT_3707 at 378.414 kb on + strand, within EX28DRAFT_3707 at 378.477 kb on - strand, within EX28DRAFT_3707 at 378.477 kb on - strand, within EX28DRAFT_3707 at 378.518 kb on + strand, within EX28DRAFT_3707 at 378.531 kb on - strand, within EX28DRAFT_3707 at 378.569 kb on + strand, within EX28DRAFT_3707 at 378.570 kb on - strand, within EX28DRAFT_3707 at 378.576 kb on - strand, within EX28DRAFT_3707 at 378.655 kb on - strand, within EX28DRAFT_3707 at 378.766 kb on + strand at 378.766 kb on + strand at 378.766 kb on + strand at 378.766 kb on + strand at 378.766 kb on + strand at 378.767 kb on - strand at 378.767 kb on - strand at 378.767 kb on - strand at 378.767 kb on - strand at 378.767 kb on - strand at 378.767 kb on - strand at 378.767 kb on - strand at 378.768 kb on + strand at 378.768 kb on + strand at 378.768 kb on + strand at 378.769 kb on - strand at 378.769 kb on - strand at 378.836 kb on + strand at 378.845 kb on + strand at 378.846 kb on - strand at 378.846 kb on - strand at 378.866 kb on + strand at 378.867 kb on - strand at 378.888 kb on + strand at 378.888 kb on + strand at 378.889 kb on - strand at 378.889 kb on - strand at 378.940 kb on - strand at 379.024 kb on + strand at 379.059 kb on + strand at 379.060 kb on - strand at 379.077 kb on + strand at 379.163 kb on - strand at 379.169 kb on + strand at 379.216 kb on + strand at 379.288 kb on + strand at 379.390 kb on + strand at 379.923 kb on + strand, within EX28DRAFT_3708 at 380.138 kb on + strand at 380.424 kb on + strand at 380.424 kb on + strand at 380.856 kb on + strand, within EX28DRAFT_3710
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 378,414 + EX28DRAFT_3707 0.70 -0.4 378,414 + EX28DRAFT_3707 0.70 -0.2 378,477 - EX28DRAFT_3707 0.75 -0.5 378,477 - EX28DRAFT_3707 0.75 +0.4 378,518 + EX28DRAFT_3707 0.78 -0.2 378,531 - EX28DRAFT_3707 0.79 +0.3 378,569 + EX28DRAFT_3707 0.81 +0.7 378,570 - EX28DRAFT_3707 0.82 -0.1 378,576 - EX28DRAFT_3707 0.82 +0.5 378,655 - EX28DRAFT_3707 0.88 -0.5 378,766 + +1.2 378,766 + -0.2 378,766 + -0.1 378,766 + +0.2 378,766 + +0.5 378,767 - +0.0 378,767 - +0.9 378,767 - -0.4 378,767 - +0.3 378,767 - -0.1 378,767 - +0.3 378,767 - -0.7 378,768 + +0.4 378,768 + +0.3 378,768 + +0.3 378,769 - +1.0 378,769 - -0.9 378,836 + -0.5 378,845 + -0.2 378,846 - -0.3 378,846 - -0.5 378,866 + -2.1 378,867 - -0.7 378,888 + -0.5 378,888 + -1.5 378,889 - +0.4 378,889 - -0.1 378,940 - +0.4 379,024 + +0.0 379,059 + -0.1 379,060 - -0.7 379,077 + +0.8 379,163 - -0.4 379,169 + -0.2 379,216 + -0.8 379,288 + -1.4 379,390 + +0.0 379,923 + EX28DRAFT_3708 0.74 -0.6 380,138 + +0.7 380,424 + -2.7 380,424 + +1.1 380,856 + EX28DRAFT_3710 0.23 -1.4
Or see this region's nucleotide sequence