Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0622 and EX28DRAFT_0623 are separated by 400 nucleotides EX28DRAFT_0623 and EX28DRAFT_0624 are separated by 62 nucleotides
EX28DRAFT_0622: EX28DRAFT_0622 - Flagellar capping protein, at 618,911 to 620,335
_0622
EX28DRAFT_0623: EX28DRAFT_0623 - Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region, at 620,736 to 621,560
_0623
EX28DRAFT_0624: EX28DRAFT_0624 - hypothetical protein, at 621,623 to 622,828
_0624
Position (kb) 620
621
622 Strain fitness (log2 ratio) -1
0
1
2 at 619.955 kb on - strand, within EX28DRAFT_0622 at 619.964 kb on - strand, within EX28DRAFT_0622 at 619.964 kb on - strand, within EX28DRAFT_0622 at 619.973 kb on - strand, within EX28DRAFT_0622 at 620.092 kb on + strand, within EX28DRAFT_0622 at 620.208 kb on - strand at 620.221 kb on - strand at 620.283 kb on + strand at 620.284 kb on - strand at 620.284 kb on - strand at 620.284 kb on - strand at 620.285 kb on + strand at 620.286 kb on - strand at 620.429 kb on + strand at 620.449 kb on - strand at 620.469 kb on - strand at 620.546 kb on - strand at 620.750 kb on + strand at 620.750 kb on + strand at 620.754 kb on - strand at 620.810 kb on + strand at 621.162 kb on - strand, within EX28DRAFT_0623 at 621.193 kb on + strand, within EX28DRAFT_0623 at 621.597 kb on + strand at 621.854 kb on - strand, within EX28DRAFT_0624 at 621.893 kb on - strand, within EX28DRAFT_0624 at 621.893 kb on - strand, within EX28DRAFT_0624 at 621.893 kb on - strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.040 kb on - strand, within EX28DRAFT_0624 at 622.175 kb on + strand, within EX28DRAFT_0624 at 622.253 kb on + strand, within EX28DRAFT_0624 at 622.322 kb on + strand, within EX28DRAFT_0624 at 622.515 kb on - strand, within EX28DRAFT_0624 at 622.556 kb on + strand, within EX28DRAFT_0624 at 622.557 kb on - strand, within EX28DRAFT_0624
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 619,955 - EX28DRAFT_0622 0.73 -0.9 619,964 - EX28DRAFT_0622 0.74 +0.5 619,964 - EX28DRAFT_0622 0.74 -1.0 619,973 - EX28DRAFT_0622 0.75 +0.2 620,092 + EX28DRAFT_0622 0.83 -0.3 620,208 - +0.6 620,221 - -0.2 620,283 + -0.6 620,284 - +0.3 620,284 - +2.2 620,284 - -0.3 620,285 + +0.5 620,286 - +0.7 620,429 + +0.5 620,449 - -0.3 620,469 - -0.9 620,546 - -0.2 620,750 + +0.1 620,750 + -1.0 620,754 - -1.4 620,810 + +0.1 621,162 - EX28DRAFT_0623 0.52 -0.3 621,193 + EX28DRAFT_0623 0.55 -0.7 621,597 + +0.2 621,854 - EX28DRAFT_0624 0.19 -0.4 621,893 - EX28DRAFT_0624 0.22 -0.2 621,893 - EX28DRAFT_0624 0.22 -0.3 621,893 - EX28DRAFT_0624 0.22 +0.7 622,039 + EX28DRAFT_0624 0.34 +0.9 622,039 + EX28DRAFT_0624 0.34 +0.3 622,039 + EX28DRAFT_0624 0.34 -0.9 622,039 + EX28DRAFT_0624 0.34 +0.6 622,040 - EX28DRAFT_0624 0.35 +0.2 622,175 + EX28DRAFT_0624 0.46 +0.6 622,253 + EX28DRAFT_0624 0.52 -0.4 622,322 + EX28DRAFT_0624 0.58 +0.5 622,515 - EX28DRAFT_0624 0.74 -0.9 622,556 + EX28DRAFT_0624 0.77 +0.0 622,557 - EX28DRAFT_0624 0.77 -0.7
Or see this region's nucleotide sequence