Experiment: M9 with casaminos and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0381 and EX28DRAFT_0382 are separated by 1 nucleotides EX28DRAFT_0382 and EX28DRAFT_0383 overlap by 1 nucleotides
EX28DRAFT_0381: EX28DRAFT_0381 - ABC-type uncharacterized transport system, duplicated ATPase component, at 352,496 to 354,085
_0381
EX28DRAFT_0382: EX28DRAFT_0382 - ABC-type uncharacterized transport system, permease component, at 354,087 to 355,112
_0382
EX28DRAFT_0383: EX28DRAFT_0383 - ABC-type uncharacterized transport system, permease component, at 355,112 to 356,206
_0383
Position (kb) 354
355
356 Strain fitness (log2 ratio) -2
-1
0
1 at 353.329 kb on + strand, within EX28DRAFT_0381 at 353.330 kb on - strand, within EX28DRAFT_0381 at 353.450 kb on - strand, within EX28DRAFT_0381 at 353.501 kb on + strand, within EX28DRAFT_0381 at 353.658 kb on - strand, within EX28DRAFT_0381 at 353.658 kb on - strand, within EX28DRAFT_0381 at 354.065 kb on - strand at 354.089 kb on - strand at 354.412 kb on + strand, within EX28DRAFT_0382 at 354.611 kb on - strand, within EX28DRAFT_0382 at 354.611 kb on - strand, within EX28DRAFT_0382 at 354.797 kb on + strand, within EX28DRAFT_0382 at 354.798 kb on - strand, within EX28DRAFT_0382 at 354.798 kb on - strand, within EX28DRAFT_0382 at 355.150 kb on + strand at 355.152 kb on + strand at 355.153 kb on - strand at 355.201 kb on + strand at 355.203 kb on + strand at 355.204 kb on - strand at 355.244 kb on - strand, within EX28DRAFT_0383 at 355.244 kb on - strand, within EX28DRAFT_0383 at 355.251 kb on + strand, within EX28DRAFT_0383 at 355.432 kb on - strand, within EX28DRAFT_0383 at 355.536 kb on + strand, within EX28DRAFT_0383 at 355.725 kb on + strand, within EX28DRAFT_0383 at 355.726 kb on - strand, within EX28DRAFT_0383 at 355.754 kb on - strand, within EX28DRAFT_0383 at 355.764 kb on + strand, within EX28DRAFT_0383 at 355.764 kb on + strand, within EX28DRAFT_0383 at 355.878 kb on + strand, within EX28DRAFT_0383
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with casaminos and trichloroethylene 76.3 uM remove 353,329 + EX28DRAFT_0381 0.52 -1.1 353,330 - EX28DRAFT_0381 0.52 -1.1 353,450 - EX28DRAFT_0381 0.60 +0.4 353,501 + EX28DRAFT_0381 0.63 +1.5 353,658 - EX28DRAFT_0381 0.73 +1.4 353,658 - EX28DRAFT_0381 0.73 -0.6 354,065 - -0.1 354,089 - +0.4 354,412 + EX28DRAFT_0382 0.32 -0.5 354,611 - EX28DRAFT_0382 0.51 +0.2 354,611 - EX28DRAFT_0382 0.51 -1.8 354,797 + EX28DRAFT_0382 0.69 +0.2 354,798 - EX28DRAFT_0382 0.69 +1.2 354,798 - EX28DRAFT_0382 0.69 -1.7 355,150 + +0.0 355,152 + +0.1 355,153 - -0.9 355,201 + +1.3 355,203 + +0.0 355,204 - +0.6 355,244 - EX28DRAFT_0383 0.12 +0.7 355,244 - EX28DRAFT_0383 0.12 +0.2 355,251 + EX28DRAFT_0383 0.13 -0.2 355,432 - EX28DRAFT_0383 0.29 -1.8 355,536 + EX28DRAFT_0383 0.39 -0.7 355,725 + EX28DRAFT_0383 0.56 -0.6 355,726 - EX28DRAFT_0383 0.56 +0.2 355,754 - EX28DRAFT_0383 0.59 -0.5 355,764 + EX28DRAFT_0383 0.60 -0.7 355,764 + EX28DRAFT_0383 0.60 +0.4 355,878 + EX28DRAFT_0383 0.70 +0.1
Or see this region's nucleotide sequence