Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03804

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,968,958	-		CCNA_03803	0.18	+1.0
3,969,002	-		CCNA_03803	0.22	-1.4
3,969,010	+		CCNA_03803	0.23	+0.6
3,969,028	-		CCNA_03803	0.25	+0.1
3,969,033	-		CCNA_03803	0.25	+0.0
3,969,038	-		CCNA_03803	0.26	-0.6
3,969,050	+		CCNA_03803	0.27	+0.1
3,969,060	+		CCNA_03803	0.28	+0.3
3,969,122	+		CCNA_03803	0.34	+0.2
3,969,161	+		CCNA_03803	0.37	-0.2
3,969,185	+		CCNA_03803	0.39	-0.1
3,969,255	+		CCNA_03803	0.46	+0.1
3,969,263	-		CCNA_03803	0.47	-1.0
3,969,263	-		CCNA_03803	0.47	-0.9
3,969,355	+		CCNA_03803	0.55	+0.4
3,969,378	+		CCNA_03803	0.57	+0.1
3,969,378	+		CCNA_03803	0.57	+0.4
3,969,378	+		CCNA_03803	0.57	+1.0
3,969,378	+		CCNA_03803	0.57	-0.1
3,969,378	+		CCNA_03803	0.57	-0.2
3,969,378	+		CCNA_03803	0.57	+0.4
3,969,378	+		CCNA_03803	0.57	-0.1
3,969,386	-		CCNA_03803	0.58	+0.0
3,969,386	-		CCNA_03803	0.58	-0.4
3,969,386	-		CCNA_03803	0.58	+0.4
3,969,386	-		CCNA_03803	0.58	-2.3
3,969,386	-		CCNA_03803	0.58	-0.7
3,969,386	-		CCNA_03803	0.58	-1.6
3,969,450	+		CCNA_03803	0.64	-0.1
3,969,450	+		CCNA_03803	0.64	-0.5
3,969,450	+		CCNA_03803	0.64	-0.8
3,969,451	+		CCNA_03803	0.64	-0.0
3,969,458	+		CCNA_03803	0.64	+0.8
3,969,458	+		CCNA_03803	0.64	+0.9
3,969,458	-		CCNA_03803	0.64	-0.3
3,969,458	-		CCNA_03803	0.64	-0.1
3,969,462	+		CCNA_03803	0.65	+0.8
3,969,466	-		CCNA_03803	0.65	-0.5
3,969,466	-		CCNA_03803	0.65	-0.5
3,969,485	-		CCNA_03803	0.67	+0.6
3,969,492	+		CCNA_03803	0.68	+1.6
3,969,498	+		CCNA_03803	0.68	+0.4
3,969,499	-		CCNA_03803	0.68	-0.1
3,969,508	-		CCNA_03803	0.69	-1.0
3,969,517	+		CCNA_03803	0.70	-0.1
3,969,525	-		CCNA_03803	0.71	-1.2
3,969,525	-		CCNA_03803	0.71	-0.0
3,969,525	-		CCNA_03803	0.71	-0.4
3,969,569	+		CCNA_03803	0.75	-0.2
3,969,587	-		CCNA_03803	0.76	+0.6
3,969,589	+		CCNA_03803	0.77	+0.5
3,969,648	-		CCNA_03803	0.82	-0.5
3,969,666	+		CCNA_03803	0.84	+0.2
3,969,666	+		CCNA_03803	0.84	+0.5
3,969,688	+		CCNA_03803	0.86	+0.7
3,969,688	+		CCNA_03803	0.86	-0.1
3,969,688	+		CCNA_03803	0.86	+0.2
3,969,696	-		CCNA_03803	0.86	+0.8
3,969,747	+				-0.5
3,969,767	-				+1.0
3,969,823	-				-0.1
3,969,837	+				-0.1
3,969,845	-				-0.0
3,969,845	-				+0.1
3,970,009	+		CCNA_03804	0.16	-0.9
3,970,017	-		CCNA_03804	0.19	-0.6
3,970,017	-		CCNA_03804	0.19	+0.2
3,970,017	-		CCNA_03804	0.19	+0.3
3,970,017	-		CCNA_03804	0.19	+0.6
3,970,077	+		CCNA_03804	0.37	-0.1
3,970,077	+		CCNA_03804	0.37	-0.4
3,970,077	+		CCNA_03804	0.37	-0.3
3,970,077	+		CCNA_03804	0.37	+0.3
3,970,085	-		CCNA_03804	0.39	-1.4
3,970,113	+		CCNA_03804	0.47	+0.1
3,970,141	+		CCNA_03804	0.56	-1.0
3,970,172	+		CCNA_03804	0.65	+0.2
3,970,172	+		CCNA_03804	0.65	-0.2
3,970,172	+		CCNA_03804	0.65	-0.5
3,970,172	+		CCNA_03804	0.65	-0.7
3,970,191	+		CCNA_03804	0.71	+0.1
3,970,263	+				-0.6
3,970,263	+				+1.0
3,970,284	-				-0.3
3,970,367	-		CCNA_03805	0.19	-0.1
3,970,367	-		CCNA_03805	0.19	-0.4
3,970,417	-		CCNA_03805	0.28	-0.4
3,970,537	-		CCNA_03805	0.49	-1.4
3,970,544	-		CCNA_03805	0.50	+0.2
3,970,544	-		CCNA_03805	0.50	-0.3
3,970,544	-		CCNA_03805	0.50	-0.5
3,970,606	-		CCNA_03805	0.60	+0.7
3,970,631	-		CCNA_03805	0.65	-0.6
3,970,641	-		CCNA_03805	0.66	+0.2
3,970,705	-		CCNA_03805	0.78	-0.0
3,970,745	-		CCNA_03805	0.84	+0.1
3,970,745	-		CCNA_03805	0.84	+0.1
3,970,786	-				+0.8
3,970,989	-				-0.5
3,970,991	+				-0.1
3,970,997	-				-0.6
3,970,997	-				+0.5
3,971,017	+				-0.3
3,971,045	-				-0.3
3,971,055	-				-1.2
3,971,104	+				-0.4
3,971,113	-				-0.8
3,971,137	+				+0.1
3,971,166	-				-0.2
3,971,168	-				-0.6
3,971,203	+				-0.1
3,971,203	+				+0.6
3,971,272	+		CCNA_03806	0.16	-0.0
3,971,278	+		CCNA_03806	0.16	+2.2
3,971,283	+		CCNA_03806	0.17	-0.2