Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02953

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,111,242	+		CCNA_02951	0.13	+0.3
3,111,297	+		CCNA_02951	0.21	+1.0
3,111,329	-		CCNA_02951	0.25	-1.2
3,111,329	-		CCNA_02951	0.25	-0.7
3,111,354	+		CCNA_02951	0.29	-0.5
3,111,375	-		CCNA_02951	0.32	+1.4
3,111,375	-		CCNA_02951	0.32	-0.7
3,111,377	+		CCNA_02951	0.32	+0.4
3,111,405	-		CCNA_02951	0.36	+1.0
3,111,480	-		CCNA_02951	0.47	+1.5
3,111,511	-		CCNA_02951	0.51	-0.4
3,111,518	+		CCNA_02951	0.52	-0.1
3,111,539	-		CCNA_02951	0.55	+0.7
3,111,539	-		CCNA_02951	0.55	-0.3
3,111,549	-		CCNA_02951	0.56	-0.8
3,111,598	-		CCNA_02951	0.63	-0.8
3,111,644	+		CCNA_02951	0.70	+1.4
3,111,655	+		CCNA_02951	0.71	+0.7
3,111,658	-		CCNA_02951	0.72	+0.2
3,111,663	-		CCNA_02951	0.73	+0.7
3,111,663	-		CCNA_02951	0.73	+0.4
3,111,692	+		CCNA_02951	0.77	+0.2
3,111,692	+		CCNA_02951	0.77	+0.3
3,111,692	+		CCNA_02951	0.77	+0.5
3,111,700	-		CCNA_02951	0.78	-0.2
3,111,733	+		CCNA_02951	0.82	-0.1
3,111,741	-		CCNA_02951	0.84	-0.1
3,111,768	+		CCNA_02951	0.87	+0.4
3,111,768	+		CCNA_02951	0.87	+0.3
3,111,776	-		CCNA_02951	0.89	+1.5
3,111,785	+		CCNA_02951	0.90	-0.4
3,111,796	-				-0.1
3,111,797	-				+0.4
3,111,886	+				+0.2
3,111,886	+				+1.1
3,111,901	-				+0.4
3,111,983	+				-1.6
3,111,989	-				+0.3
3,111,994	+				-0.2
3,112,002	-				-0.9
3,112,057	-				+0.0
3,112,152	+		CCNA_02952	0.31	-0.3
3,112,152	+		CCNA_02952	0.31	+0.3
3,112,152	+		CCNA_02952	0.31	-0.5
3,112,152	-		CCNA_02952	0.31	+0.1
3,112,160	-		CCNA_02952	0.37	+0.3
3,112,196	-		CCNA_02952	0.66	-0.8
3,112,232	+				+0.4
3,112,235	-				-1.0
3,112,277	-				+0.2
3,112,336	+		CCNA_02953	0.10	-1.0
3,112,336	+		CCNA_02953	0.10	-0.6
3,112,336	+		CCNA_02953	0.10	+1.5
3,112,336	+		CCNA_02953	0.10	+0.5
3,112,344	-		CCNA_02953	0.11	-0.1
3,112,349	-		CCNA_02953	0.12	+0.2
3,112,351	+		CCNA_02953	0.12	+0.2
3,112,363	+		CCNA_02953	0.13	-0.6
3,112,363	+		CCNA_02953	0.13	-0.4
3,112,371	-		CCNA_02953	0.14	-0.1
3,112,392	+		CCNA_02953	0.16	+0.0
3,112,449	-		CCNA_02953	0.22	+0.0
3,112,478	+		CCNA_02953	0.25	+1.2
3,112,486	-		CCNA_02953	0.26	-1.6
3,112,496	+		CCNA_02953	0.27	+0.1
3,112,509	+		CCNA_02953	0.28	-2.1
3,112,509	+		CCNA_02953	0.28	-0.1
3,112,509	+		CCNA_02953	0.28	-0.1
3,112,517	-		CCNA_02953	0.29	-0.5
3,112,524	+		CCNA_02953	0.30	-1.5
3,112,539	+		CCNA_02953	0.31	+0.3
3,112,570	-		CCNA_02953	0.35	+0.3
3,112,595	+		CCNA_02953	0.37	+0.0
3,112,595	+		CCNA_02953	0.37	-0.4
3,112,603	-		CCNA_02953	0.38	-1.9
3,112,603	-		CCNA_02953	0.38	-1.0
3,112,619	-		CCNA_02953	0.40	-1.1
3,112,704	-		CCNA_02953	0.48	+1.0
3,112,712	-		CCNA_02953	0.49	-0.7
3,112,731	-		CCNA_02953	0.51	+0.3
3,112,808	+		CCNA_02953	0.59	+0.4
3,112,818	-		CCNA_02953	0.60	+0.2
3,112,856	-		CCNA_02953	0.64	-1.3
3,112,870	+		CCNA_02953	0.66	+0.5
3,112,870	+		CCNA_02953	0.66	+0.3
3,112,870	+		CCNA_02953	0.66	-0.3
3,112,878	-		CCNA_02953	0.66	-0.2
3,112,878	-		CCNA_02953	0.66	-1.4
3,112,878	-		CCNA_02953	0.66	+0.1
3,112,915	+		CCNA_02953	0.70	-0.7
3,112,923	-		CCNA_02953	0.71	-1.5
3,112,936	+		CCNA_02953	0.72	+0.1
3,113,042	+		CCNA_02953	0.83	+1.0
3,113,098	-		CCNA_02953	0.89	+0.5
3,113,148	-				+1.3
3,113,171	-				-0.7
3,113,197	+				+0.2
3,113,197	+				-0.3
3,113,197	+				-0.7
3,113,197	+				+0.2
3,113,197	+				+0.1
3,113,205	-				+0.8
3,113,205	-				-0.2
3,113,205	-				-1.6
3,113,205	-				+2.1
3,113,217	-				+0.2
3,113,228	-				-1.1
3,113,262	-				+0.5
3,113,300	+				-0.2
3,113,300	-				-0.1
3,113,317	+				+0.7
3,113,317	+				-0.4
3,113,317	+				+0.2
3,113,325	+				+0.3
3,113,325	-				-0.3
3,113,391	+				+1.2
3,113,392	-				+0.2
3,113,428	+				+0.2
3,113,451	+				+0.1
3,113,451	+				+0.1
3,113,451	+				-0.1
3,113,493	+				+0.3
3,113,521	-				-0.1
3,113,683	-		CCNA_02954	0.16	+1.2
3,113,683	-		CCNA_02954	0.16	+0.0
3,113,695	-		CCNA_02954	0.17	+0.8
3,113,698	+		CCNA_02954	0.18	-0.2
3,113,698	+		CCNA_02954	0.18	+0.3
3,113,706	+		CCNA_02954	0.19	+1.0
3,113,789	+		CCNA_02954	0.28	+0.3
3,113,863	-		CCNA_02954	0.37	+0.4
3,113,867	+		CCNA_02954	0.38	-0.4
3,113,889	+		CCNA_02954	0.40	-0.1
3,113,901	+		CCNA_02954	0.42	-0.0
3,113,909	-		CCNA_02954	0.42	+0.1
3,113,944	+		CCNA_02954	0.47	+0.3
3,114,017	-		CCNA_02954	0.55	-0.7
3,114,077	-		CCNA_02954	0.62	+1.1
3,114,104	-		CCNA_02954	0.65	-0.0
3,114,139	-		CCNA_02954	0.69	-0.0
3,114,182	-		CCNA_02954	0.75	-2.3