Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02648

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,801,258	-		CCNA_02647	0.50	-0.6
2,801,258	-		CCNA_02647	0.50	+0.4
2,801,268	-		CCNA_02647	0.51	+0.2
2,801,275	-		CCNA_02647	0.51	-0.2
2,801,301	+		CCNA_02647	0.54	-0.2
2,801,332	+		CCNA_02647	0.58	+0.5
2,801,387	+		CCNA_02647	0.64	-1.6
2,801,437	+		CCNA_02647	0.69	-0.1
2,801,437	+		CCNA_02647	0.69	-1.1
2,801,445	-		CCNA_02647	0.70	+0.3
2,801,449	-		CCNA_02647	0.70	+0.2
2,801,465	-		CCNA_02647	0.72	+0.4
2,801,495	+		CCNA_02647	0.75	-1.2
2,801,503	-		CCNA_02647	0.76	-0.8
2,801,504	-		CCNA_02647	0.76	-0.7
2,801,514	-		CCNA_02647	0.77	+0.3
2,801,533	+		CCNA_02647	0.79	-0.8
2,801,547	+		CCNA_02647	0.81	-2.6
2,801,564	+		CCNA_02647	0.83	-0.1
2,801,580	+		CCNA_02647	0.84	-0.3
2,801,588	-		CCNA_02647	0.85	+0.4
2,801,595	+		CCNA_02647	0.86	-2.6
2,801,602	+		CCNA_02647	0.87	-0.5
2,801,602	+		CCNA_02647	0.87	-1.4
2,801,608	-		CCNA_02647	0.88	+0.1
2,801,623	+		CCNA_02647	0.89	+0.0
2,801,767	+				-1.3
2,801,775	-				+1.5
2,801,815	-				+0.5
2,801,853	+				+1.0
2,801,894	+				-1.3
2,801,902	-				+1.0
2,801,902	-				-1.7
2,801,925	-				-0.3
2,801,925	-				+0.1
2,801,949	-				-1.1
2,801,949	-				-0.3
2,801,989	+				-1.1
2,801,989	+				+0.6
2,801,989	+				+2.5
2,801,989	+				-0.9
2,801,989	+				-0.8
2,801,992	-				-0.2
2,801,997	-				+0.1
2,801,997	-				+0.1
2,802,016	-				-0.6
2,802,045	+				-0.2
2,802,064	+				-0.3
2,802,072	-				+0.4
2,802,072	-				+1.1
2,802,088	+				+0.3
2,802,102	-				-0.6
2,802,127	-				+0.5
2,802,134	+				+0.0
2,802,142	-				-2.2
2,802,179	+				+1.5
2,802,184	+				-2.1
2,802,187	-				-0.5
2,802,187	-				-1.3
2,802,189	+				-0.3
2,802,197	-				-0.4
2,802,197	-				+0.2
2,802,212	-				-0.4
2,802,289	-				-1.9
2,802,304	+				+0.4
2,802,304	+				-2.1
2,802,304	+				+0.2
2,802,343	-		CCNA_02648	0.12	-1.1
2,802,364	+		CCNA_02648	0.14	-2.0
2,802,369	-		CCNA_02648	0.15	-0.5
2,802,391	+		CCNA_02648	0.17	-0.2
2,802,391	+		CCNA_02648	0.17	-1.4
2,802,428	+		CCNA_02648	0.21	-0.2
2,802,485	+		CCNA_02648	0.27	-0.0
2,802,485	+		CCNA_02648	0.27	-2.0
2,802,485	+		CCNA_02648	0.27	-2.1
2,802,493	-		CCNA_02648	0.28	-0.7
2,802,568	+		CCNA_02648	0.36	-1.1
2,802,578	+		CCNA_02648	0.38	+0.1
2,802,620	-		CCNA_02648	0.42	-0.5
2,802,637	+		CCNA_02648	0.44	-1.4
2,802,725	-		CCNA_02648	0.54	-0.8
2,802,725	-		CCNA_02648	0.54	-1.1
2,802,768	-		CCNA_02648	0.58	-0.9
2,802,838	+		CCNA_02648	0.66	+0.5
2,802,875	+		CCNA_02648	0.70	+0.8
2,802,885	-		CCNA_02648	0.71	-1.3
2,802,887	+		CCNA_02648	0.71	-0.9
2,802,900	-		CCNA_02648	0.73	-1.3
2,802,908	+		CCNA_02648	0.73	-0.5
2,802,911	-		CCNA_02648	0.74	+0.6
2,802,918	+		CCNA_02648	0.74	+0.2
2,802,918	+		CCNA_02648	0.74	-0.3
2,802,926	-		CCNA_02648	0.75	+0.1
2,802,955	+		CCNA_02648	0.79	-0.0
2,802,967	+		CCNA_02648	0.80	-1.0
2,802,983	+		CCNA_02648	0.82	+0.5
2,802,996	-		CCNA_02648	0.83	-0.1
2,803,064	+				+0.5
2,803,135	+				+0.1
2,803,135	+				-0.3
2,803,143	-				-0.3
2,803,173	+				+0.1
2,803,184	-				+0.1
2,803,191	-				+1.6
2,803,202	+				-0.9
2,803,234	-				+0.8
2,803,287	+		CCNA_02649	0.18	-0.1
2,803,307	+		CCNA_02649	0.21	-1.7
2,803,344	-		CCNA_02649	0.27	-0.7
2,803,369	+		CCNA_02649	0.31	-0.0
2,803,403	-		CCNA_02649	0.37	+1.1
2,803,422	+		CCNA_02649	0.40	-0.8
2,803,430	-		CCNA_02649	0.41	+0.1
2,803,497	-		CCNA_02649	0.52	-0.2
2,803,499	+		CCNA_02649	0.52	+0.1
2,803,500	+		CCNA_02649	0.53	-0.7
2,803,536	-		CCNA_02649	0.58	+0.5
2,803,581	-		CCNA_02649	0.66	+1.2
2,803,629	-		CCNA_02649	0.74	-0.2
2,803,688	-		CCNA_02649	0.83	-0.6
2,803,730	-				-1.0
2,803,738	+				-1.2
2,803,810	-				-0.2
2,803,814	+				+0.1
2,803,861	+				-1.6
2,803,869	-		CCNA_02650	0.11	-0.8
2,803,944	-		CCNA_02650	0.21	+1.3
2,803,944	-		CCNA_02650	0.21	-1.5
2,803,959	-		CCNA_02650	0.23	+1.1
2,804,018	-		CCNA_02650	0.31	-1.1
2,804,027	+		CCNA_02650	0.33	-0.5
2,804,048	-		CCNA_02650	0.36	-0.7
2,804,048	-		CCNA_02650	0.36	-0.8
2,804,137	-		CCNA_02650	0.48	+0.1