Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02089

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,236,988	-		CCNA_02087	0.53	+0.4
2,237,018	-		CCNA_02087	0.56	+0.2
2,237,021	+		CCNA_02087	0.56	-0.7
2,237,029	-		CCNA_02087	0.57	+0.4
2,237,039	-		CCNA_02087	0.58	-1.4
2,237,083	+		CCNA_02087	0.61	-0.6
2,237,083	+		CCNA_02087	0.61	-1.4
2,237,083	+		CCNA_02087	0.61	-0.8
2,237,092	-		CCNA_02087	0.62	+1.1
2,237,096	-		CCNA_02087	0.62	-1.0
2,237,097	-		CCNA_02087	0.62	+1.1
2,237,097	-		CCNA_02087	0.62	-0.1
2,237,111	-		CCNA_02087	0.64	-0.1
2,237,116	-		CCNA_02087	0.64	+0.8
2,237,116	-		CCNA_02087	0.64	+0.0
2,237,118	+		CCNA_02087	0.64	-0.6
2,237,121	-		CCNA_02087	0.64	-0.0
2,237,137	-		CCNA_02087	0.66	+0.3
2,237,143	+		CCNA_02087	0.66	-0.1
2,237,144	+		CCNA_02087	0.66	-0.3
2,237,227	+		CCNA_02087	0.73	-0.4
2,237,227	+		CCNA_02087	0.73	-0.7
2,237,227	+		CCNA_02087	0.73	-0.8
2,237,228	-		CCNA_02087	0.74	+0.5
2,237,235	-		CCNA_02087	0.74	-0.3
2,237,235	-		CCNA_02087	0.74	+0.5
2,237,252	+		CCNA_02087	0.76	+0.0
2,237,259	-		CCNA_02087	0.76	-0.2
2,237,259	-		CCNA_02087	0.76	+0.2
2,237,283	-		CCNA_02087	0.78	-0.2
2,237,283	-		CCNA_02087	0.78	+0.1
2,237,283	-		CCNA_02087	0.78	+0.2
2,237,294	-		CCNA_02087	0.79	-0.1
2,237,319	+		CCNA_02087	0.81	-0.9
2,237,319	+		CCNA_02087	0.81	+1.0
2,237,327	-		CCNA_02087	0.82	-0.4
2,237,334	-		CCNA_02087	0.82	-1.9
2,237,334	-		CCNA_02087	0.82	-0.4
2,237,368	+		CCNA_02087	0.85	-0.6
2,237,371	-		CCNA_02087	0.86	+0.4
2,237,376	-		CCNA_02087	0.86	-0.2
2,237,413	-		CCNA_02087	0.89	-0.6
2,237,439	+				+0.9
2,237,439	+				-0.9
2,237,439	+				-1.2
2,237,439	+				-0.4
2,237,447	-				-0.4
2,237,447	-				+0.3
2,237,452	+				+1.2
2,237,463	+				-0.1
2,237,471	-				-0.3
2,237,529	+				+1.3
2,237,529	-				-0.8
2,237,539	-				-0.7
2,237,566	+				+0.1
2,237,573	-				+0.1
2,237,593	-				-0.1
2,237,599	+				+0.2
2,237,603	-				-0.7
2,237,607	-				-0.2
2,237,635	-				-0.7
2,237,635	-				-0.2
2,237,651	-				+0.5
2,237,682	-		CCNA_02088	0.16	+0.1
2,237,693	+		CCNA_02088	0.19	+0.4
2,237,706	+		CCNA_02088	0.23	+0.2
2,237,707	-		CCNA_02088	0.23	+0.8
2,237,714	-		CCNA_02088	0.25	+0.1
2,237,714	-		CCNA_02088	0.25	+0.4
2,237,714	-		CCNA_02088	0.25	-0.2
2,237,714	-		CCNA_02088	0.25	-0.1
2,237,736	-		CCNA_02088	0.32	-1.0
2,237,778	+		CCNA_02088	0.44	-0.0
2,237,794	+		CCNA_02088	0.49	+0.1
2,237,949	+				+0.3
2,237,978	-				+0.1
2,237,982	+				-1.0
2,238,007	+		CCNA_02089	0.11	+0.5
2,238,007	+		CCNA_02089	0.11	+0.4
2,238,007	+		CCNA_02089	0.11	+0.6
2,238,015	-		CCNA_02089	0.13	+0.7
2,238,018	+		CCNA_02089	0.14	+0.2
2,238,034	+		CCNA_02089	0.18	-0.1
2,238,042	-		CCNA_02089	0.20	-0.1
2,238,063	-		CCNA_02089	0.26	+0.0
2,238,103	+		CCNA_02089	0.36	+0.2
2,238,103	+		CCNA_02089	0.36	+0.3
2,238,103	+		CCNA_02089	0.36	-0.1
2,238,103	+		CCNA_02089	0.36	+0.1
2,238,103	+		CCNA_02089	0.36	-0.0
2,238,103	+		CCNA_02089	0.36	-0.4
2,238,103	+		CCNA_02089	0.36	-1.7
2,238,103	+		CCNA_02089	0.36	-0.2
2,238,103	+		CCNA_02089	0.36	+0.5
2,238,103	+		CCNA_02089	0.36	-0.8
2,238,103	+		CCNA_02089	0.36	+1.8
2,238,103	+		CCNA_02089	0.36	+1.0
2,238,103	+		CCNA_02089	0.36	+0.5
2,238,103	+		CCNA_02089	0.36	-1.0
2,238,103	+		CCNA_02089	0.36	+0.6
2,238,103	+		CCNA_02089	0.36	+0.9
2,238,111	-		CCNA_02089	0.38	-0.7
2,238,111	-		CCNA_02089	0.38	+0.8
2,238,111	-		CCNA_02089	0.38	-0.7
2,238,111	-		CCNA_02089	0.38	-1.7
2,238,111	-		CCNA_02089	0.38	+0.2
2,238,111	-		CCNA_02089	0.38	-0.0
2,238,146	+		CCNA_02089	0.48	-1.1
2,238,154	-		CCNA_02089	0.50	-0.1
2,238,174	+		CCNA_02089	0.55	+1.3
2,238,182	-		CCNA_02089	0.57	-1.1
2,238,182	-		CCNA_02089	0.57	-0.7
2,238,192	+		CCNA_02089	0.60	-0.5
2,238,200	-		CCNA_02089	0.62	+0.3
2,238,205	-		CCNA_02089	0.63	-0.0
2,238,252	+		CCNA_02089	0.76	-0.0
2,238,276	+		CCNA_02089	0.82	+0.4
2,238,306	-				+0.9
2,238,335	-				+0.2
2,239,159	+				+0.4
2,239,159	+				-2.3
2,239,159	+				+1.4
2,239,159	+				-0.1
2,239,159	+				+0.2
2,239,159	+				+0.3
2,239,159	+				+0.1
2,239,159	+				-0.1
2,239,159	+				-2.1
2,239,159	+				+0.4
2,239,159	+				-1.0
2,239,159	+				+0.1
2,239,159	+				-1.2
2,239,159	+				+0.6
2,239,159	+				-0.2
2,239,159	+				+0.5
2,239,159	+				+0.8
2,239,159	+				+0.6
2,239,164	+				-0.3
2,239,167	-				+0.8
2,239,167	-				+0.7
2,239,167	-				-0.8
2,239,167	-				-0.6
2,239,167	-				-0.9
2,239,167	-				-0.9
2,239,167	-				-0.7
2,239,167	-				-1.2
2,239,167	-				-1.1
2,239,167	-				+0.7
2,239,167	-				-0.2
2,239,167	-				+0.5
2,239,174	-				-1.0
2,239,176	+				+0.3
2,239,234	-				-3.0
2,239,243	-				+0.5
2,239,243	-				-0.1
2,239,245	-				-0.0
2,239,273	-		CCNA_02091	0.10	-0.1
2,239,292	+		CCNA_02091	0.12	+0.4
2,239,301	+		CCNA_02091	0.13	+0.0
2,239,301	+		CCNA_02091	0.13	+0.5
2,239,309	-		CCNA_02091	0.14	-0.6
2,239,309	-		CCNA_02091	0.14	+1.3
2,239,311	-		CCNA_02091	0.14	-1.9