Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01868

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,004,232	+		CCNA_03894	0.34	-1.3
2,004,232	+		CCNA_03894	0.34	-0.8
2,004,259	+		CCNA_03894	0.36	-1.3
2,004,262	-		CCNA_03894	0.36	+0.0
2,004,264	+		CCNA_03894	0.36	-0.3
2,004,264	+		CCNA_03894	0.36	-0.9
2,004,267	-		CCNA_03894	0.37	-0.1
2,004,272	-		CCNA_03894	0.37	+0.4
2,004,320	+		CCNA_03894	0.41	-0.2
2,004,328	-		CCNA_03894	0.42	-1.3
2,004,337	-		CCNA_03894	0.42	-0.1
2,004,338	+		CCNA_03894	0.42	-1.5
2,004,380	+		CCNA_03894	0.46	+1.3
2,004,380	+		CCNA_03894	0.46	-0.8
2,004,382	-		CCNA_03894	0.46	+0.8
2,004,449	-		CCNA_03894	0.51	+0.5
2,004,507	+		CCNA_03894	0.56	-0.3
2,004,521	-		CCNA_03894	0.57	-2.0
2,004,545	+		CCNA_03894	0.59	+0.4
2,004,579	-		CCNA_03894	0.62	+0.4
2,004,676	-		CCNA_03894	0.70	+0.3
2,004,678	+		CCNA_03894	0.70	+0.2
2,004,685	+		CCNA_03894	0.70	-0.1
2,004,695	+		CCNA_03894	0.71	+0.7
2,004,742	+		CCNA_03894	0.75	-0.4
2,004,771	+		CCNA_03894	0.77	+0.7
2,004,868	+		CCNA_03894	0.85	-1.7
2,004,881	-		CCNA_03894	0.86	-0.7
2,004,923	-		CCNA_03894	0.90	+1.0
2,004,956	-				-1.2
2,005,006	+				-3.7
2,005,014	-				+1.2
2,005,014	-				+0.7
2,005,018	+				+0.3
2,005,101	+				-1.4
2,005,113	-				-0.1
2,005,183	-				-0.6
2,005,189	+				+0.5
2,005,235	-				-1.0
2,005,252	-				-1.8
2,005,291	+		CCNA_01868	0.12	-0.1
2,005,309	-		CCNA_01868	0.15	-1.2
2,005,316	+		CCNA_01868	0.15	+0.1
2,005,347	-		CCNA_01868	0.19	-2.7
2,005,423	-		CCNA_01868	0.29	-2.0
2,005,446	+		CCNA_01868	0.32	+1.3
2,005,446	+		CCNA_01868	0.32	+0.4
2,005,529	-		CCNA_01868	0.42	-1.9
2,005,546	+		CCNA_01868	0.44	+1.3
2,005,554	-		CCNA_01868	0.45	-1.1
2,005,566	+		CCNA_01868	0.47	+0.7
2,005,566	+		CCNA_01868	0.47	-1.4
2,005,589	-		CCNA_01868	0.50	+1.7
2,005,613	+		CCNA_01868	0.53	-0.3
2,005,613	+		CCNA_01868	0.53	-1.4
2,005,752	+		CCNA_01868	0.70	-0.7
2,005,752	+		CCNA_01868	0.70	-1.9
2,005,752	-		CCNA_01868	0.70	+0.2
2,005,760	-		CCNA_01868	0.71	-0.8
2,005,760	-		CCNA_01868	0.71	-1.2
2,005,782	-		CCNA_01868	0.74	+0.7
2,005,782	-		CCNA_01868	0.74	-1.9
2,005,782	-		CCNA_01868	0.74	-1.2
2,005,782	-		CCNA_01868	0.74	-1.3
2,005,792	+		CCNA_01868	0.75	-1.0
2,005,795	-		CCNA_01868	0.76	+0.2
2,005,820	-		CCNA_01868	0.79	-0.8
2,005,838	-		CCNA_01868	0.81	+0.3
2,005,886	-		CCNA_01868	0.87	+1.7
2,005,894	-		CCNA_01868	0.88	-0.7
2,005,894	-		CCNA_01868	0.88	+0.3
2,005,894	-		CCNA_01868	0.88	-0.5
2,005,894	-		CCNA_01868	0.88	-0.5
2,005,894	-		CCNA_01868	0.88	-2.7
2,005,894	-		CCNA_01868	0.88	-1.9
2,005,988	+				-1.7
2,005,996	-				+0.3
2,006,021	+				+0.1
2,006,021	+				+1.7
2,006,021	+				+0.3
2,006,024	-				-0.1
2,006,029	-				+0.2
2,006,029	-				-2.5
2,006,054	+				-0.8
2,006,077	+				-0.4
2,006,105	-				+1.1
2,006,105	-				-3.0
2,006,120	+				+0.1
2,006,120	+				-1.1
2,006,120	+				-1.4
2,006,128	-				-0.7
2,006,128	-				-0.7
2,006,128	-				-0.2
2,006,129	-				+1.5
2,006,144	-				-0.4
2,006,146	-				-0.1
2,006,209	+				-0.2
2,006,243	-				-0.3
2,006,248	-				-1.2
2,006,257	+				-1.5
2,006,257	+				+0.3
2,006,257	+				-0.8
2,006,260	-		CCNA_01869	0.10	+0.4
2,006,265	-		CCNA_01869	0.10	-0.8
2,006,265	-		CCNA_01869	0.10	+0.2
2,006,265	-		CCNA_01869	0.10	-0.4
2,006,312	+		CCNA_01869	0.12	-0.5
2,006,318	+		CCNA_01869	0.12	-0.8
2,006,326	-		CCNA_01869	0.13	-1.4
2,006,331	+		CCNA_01869	0.13	-2.3
2,006,337	-		CCNA_01869	0.13	+0.2
2,006,337	-		CCNA_01869	0.13	+0.4
2,006,341	+		CCNA_01869	0.13	-0.5
2,006,349	-		CCNA_01869	0.13	-0.1
2,006,360	+		CCNA_01869	0.14	-1.5
2,006,410	-		CCNA_01869	0.16	-1.2
2,006,410	-		CCNA_01869	0.16	-0.1
2,006,455	-		CCNA_01869	0.17	+0.3
2,006,501	+		CCNA_01869	0.19	-0.4
2,006,515	+		CCNA_01869	0.20	-0.4
2,006,530	+		CCNA_01869	0.20	-0.6
2,006,533	-		CCNA_01869	0.20	-0.8
2,006,533	-		CCNA_01869	0.20	+0.7
2,006,562	-		CCNA_01869	0.21	-0.2
2,006,610	-		CCNA_01869	0.23	+1.5
2,006,627	+		CCNA_01869	0.24	-0.3
2,006,629	-		CCNA_01869	0.24	+1.3
2,006,637	+		CCNA_01869	0.24	+0.5
2,006,637	+		CCNA_01869	0.24	+0.1
2,006,652	+		CCNA_01869	0.25	+0.1
2,006,661	+		CCNA_01869	0.25	-0.9
2,006,715	-		CCNA_01869	0.27	-0.3
2,006,716	+		CCNA_01869	0.27	+0.8
2,006,736	+		CCNA_01869	0.28	+1.8
2,006,736	+		CCNA_01869	0.28	-1.4
2,006,737	-		CCNA_01869	0.28	-0.4
2,006,745	-		CCNA_01869	0.28	-1.0
2,006,745	-		CCNA_01869	0.28	-0.9
2,006,757	+		CCNA_01869	0.29	-0.5
2,006,772	+		CCNA_01869	0.29	-0.1
2,006,772	+		CCNA_01869	0.29	-0.5
2,006,780	-		CCNA_01869	0.29	-1.2
2,006,780	-		CCNA_01869	0.29	+0.4
2,006,780	-		CCNA_01869	0.29	+1.1
2,006,794	+		CCNA_01869	0.30	+0.3
2,006,794	+		CCNA_01869	0.30	-0.9
2,006,794	+		CCNA_01869	0.30	-0.3
2,006,802	-		CCNA_01869	0.30	-1.7
2,006,802	-		CCNA_01869	0.30	-0.7
2,006,850	+		CCNA_01869	0.32	-1.7
2,006,879	+		CCNA_01869	0.33	+0.2
2,006,892	-		CCNA_01869	0.34	-0.3
2,006,918	-		CCNA_01869	0.35	+0.8
2,006,943	-		CCNA_01869	0.36	-0.3
2,006,951	-		CCNA_01869	0.36	-1.6
2,006,962	-		CCNA_01869	0.36	-0.2
2,006,968	+		CCNA_01869	0.36	+0.7
2,006,968	+		CCNA_01869	0.36	-1.2
2,006,968	+		CCNA_01869	0.36	+0.1
2,006,968	+		CCNA_01869	0.36	-1.3
2,006,976	-		CCNA_01869	0.37	+0.0
2,006,976	-		CCNA_01869	0.37	-0.3
2,006,976	-		CCNA_01869	0.37	+2.3
2,006,976	-		CCNA_01869	0.37	-0.9
2,006,976	-		CCNA_01869	0.37	+1.4