Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01816

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,941,224	+				+0.6
1,941,294	+				+0.5
1,941,311	+				+0.1
1,941,322	-				-1.7
1,941,324	-				-0.9
1,941,396	+				+0.6
1,941,461	+				+0.3
1,941,480	+				+0.3
1,941,502	+				+0.1
1,941,596	+		CCNA_01816	0.13	+1.3
1,941,596	+		CCNA_01816	0.13	-0.1
1,941,604	-		CCNA_01816	0.13	+0.4
1,941,604	-		CCNA_01816	0.13	-1.7
1,941,631	+		CCNA_01816	0.14	-0.2
1,941,634	-		CCNA_01816	0.14	-1.0
1,941,639	-		CCNA_01816	0.15	-0.5
1,941,683	+		CCNA_01816	0.17	+0.7
1,941,683	+		CCNA_01816	0.17	+1.0
1,941,683	+		CCNA_01816	0.17	+0.7
1,941,691	-		CCNA_01816	0.17	+0.3
1,941,691	-		CCNA_01816	0.17	-1.7
1,941,734	+		CCNA_01816	0.19	+0.6
1,941,742	-		CCNA_01816	0.19	+0.6
1,941,742	-		CCNA_01816	0.19	-0.4
1,941,742	-		CCNA_01816	0.19	+0.6
1,941,742	-		CCNA_01816	0.19	-1.0
1,941,742	-		CCNA_01816	0.19	-1.0
1,941,742	-		CCNA_01816	0.19	-0.7
1,941,831	+		CCNA_01816	0.23	-0.1
1,941,840	-		CCNA_01816	0.24	-0.5
1,941,847	+		CCNA_01816	0.24	+0.8
1,941,863	+		CCNA_01816	0.25	+0.5
1,941,884	+		CCNA_01816	0.25	+0.3
1,941,900	+		CCNA_01816	0.26	-1.5
1,941,905	+		CCNA_01816	0.26	+1.0
1,941,905	+		CCNA_01816	0.26	+0.7
1,941,905	+		CCNA_01816	0.26	+2.0
1,942,057	+		CCNA_01816	0.33	+0.5
1,942,062	+		CCNA_01816	0.33	+1.2
1,942,062	+		CCNA_01816	0.33	+0.6
1,942,075	-		CCNA_01816	0.34	-1.9
1,942,085	+		CCNA_01816	0.34	+1.1
1,942,085	+		CCNA_01816	0.34	+0.5
1,942,245	-		CCNA_01816	0.42	-0.7
1,942,245	-		CCNA_01816	0.42	-0.8
1,942,253	+		CCNA_01816	0.42	+0.8
1,942,306	-		CCNA_01816	0.44	-0.3
1,942,370	+		CCNA_01816	0.47	+0.8
1,942,392	+		CCNA_01816	0.48	+0.8
1,942,409	+		CCNA_01816	0.49	+0.9
1,942,409	+		CCNA_01816	0.49	+0.6
1,942,446	-		CCNA_01816	0.51	-1.5
1,942,514	+		CCNA_01816	0.54	+1.0
1,942,593	+		CCNA_01816	0.57	+0.6
1,942,601	-		CCNA_01816	0.57	-1.3
1,942,703	+		CCNA_01816	0.62	+0.7
1,942,731	+		CCNA_01816	0.63	+0.9
1,942,776	+		CCNA_01816	0.65	+1.4
1,942,844	-		CCNA_01816	0.68	+2.0
1,942,947	-		CCNA_01816	0.73	-2.5
1,943,012	+		CCNA_01816	0.76	+0.9
1,943,054	+		CCNA_01816	0.78	+1.1
1,943,085	+		CCNA_01816	0.79	+0.6
1,943,182	+		CCNA_01816	0.83	+0.9
1,943,182	+		CCNA_01816	0.83	+0.7
1,943,200	-		CCNA_01816	0.84	-1.7
1,943,207	-		CCNA_01816	0.84	-1.0
1,943,269	-		CCNA_01816	0.87	-0.8
1,943,274	+		CCNA_01816	0.87	+1.1
1,943,274	+		CCNA_01816	0.87	+0.4
1,943,308	-		CCNA_01816	0.89	+0.2
1,943,323	-		CCNA_01816	0.90	-0.4
1,943,394	+				+0.5
1,943,395	+				+0.6
1,943,395	+				+1.2
1,943,395	-				-0.2
1,943,408	-				+0.5
1,943,408	-				+1.0
1,943,408	-				+0.8
1,943,451	-				-0.3
1,943,455	-				+0.3
1,943,487	+				+1.1
1,943,511	+				+0.4
1,943,526	+				+1.8
1,943,526	+				-0.6
1,943,534	-				+1.1
1,943,660	-				-0.4
1,943,738	-		CCNA_01817	0.13	-1.6
1,943,739	+		CCNA_01817	0.13	-1.1
1,943,739	+		CCNA_01817	0.13	-0.4
1,943,739	+		CCNA_01817	0.13	-0.7
1,943,758	+		CCNA_01817	0.15	-0.4
1,943,759	+		CCNA_01817	0.15	-0.6
1,943,766	-		CCNA_01817	0.15	+0.7
1,943,814	-		CCNA_01817	0.19	+1.7
1,943,966	-		CCNA_01817	0.30	-1.1
1,944,003	-		CCNA_01817	0.32	-1.6
1,944,100	-		CCNA_01817	0.39	-1.1
1,944,130	-		CCNA_01817	0.42	-1.9
1,944,290	+		CCNA_01817	0.53	-1.8
1,944,298	-		CCNA_01817	0.54	-0.9
1,944,327	-		CCNA_01817	0.56	-0.3
1,944,455	-		CCNA_01817	0.65	-1.3
1,944,548	+		CCNA_01817	0.72	-0.4