Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01694

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,820,736	-				-1.7
1,820,803	+				+0.1
1,820,903	-				+1.7
1,820,972	-		CCNA_01693	0.18	-0.8
1,821,159	+		CCNA_01693	0.38	+0.4
1,821,283	+		CCNA_01693	0.52	-0.5
1,821,283	+		CCNA_01693	0.52	+1.5
1,821,291	-		CCNA_01693	0.53	-0.3
1,821,304	+		CCNA_01693	0.55	+0.9
1,821,319	+		CCNA_01693	0.56	-0.5
1,821,322	-		CCNA_01693	0.57	+0.4
1,821,389	-		CCNA_01693	0.64	-0.9
1,821,398	+		CCNA_01693	0.65	+0.4
1,821,421	+		CCNA_01693	0.68	-0.8
1,821,429	-		CCNA_01693	0.69	-0.2
1,821,436	+		CCNA_01693	0.69	+0.2
1,821,436	+		CCNA_01693	0.69	-4.1
1,821,501	+		CCNA_01693	0.77	-1.3
1,821,514	-		CCNA_01693	0.78	+0.3
1,821,543	-		CCNA_01693	0.81	+0.4
1,821,543	-		CCNA_01693	0.81	+1.0
1,821,556	+		CCNA_01693	0.83	+0.5
1,821,556	+		CCNA_01693	0.83	-0.4
1,821,564	-		CCNA_01693	0.84	-0.8
1,821,564	-		CCNA_01693	0.84	-0.1
1,821,566	+		CCNA_01693	0.84	+0.8
1,821,574	-		CCNA_01693	0.85	+0.9
1,821,616	+		CCNA_01693	0.89	-1.3
1,821,621	+				+0.6
1,821,621	+				-0.0
1,821,629	-				-0.7
1,821,629	-				-0.1
1,821,629	-				-0.9
1,821,665	+				-1.8
1,821,666	-				-0.5
1,821,682	+				-0.4
1,821,682	-				-0.0
1,821,683	+				+0.0
1,821,704	+				-0.4
1,821,816	-				-1.4
1,821,825	+				+2.7
1,821,893	+				-0.4
1,821,941	-		CCNA_01694	0.11	+0.5
1,822,026	-		CCNA_01694	0.16	-3.3
1,822,026	-		CCNA_01694	0.16	+0.4
1,822,026	-		CCNA_01694	0.16	+0.1
1,822,071	+		CCNA_01694	0.18	-0.7
1,822,089	+		CCNA_01694	0.19	-0.4
1,822,098	+		CCNA_01694	0.19	-0.7
1,822,098	+		CCNA_01694	0.19	-0.3
1,822,205	+		CCNA_01694	0.25	-0.7
1,822,222	+		CCNA_01694	0.26	+0.0
1,822,237	-		CCNA_01694	0.27	+0.3
1,822,238	+		CCNA_01694	0.27	-0.1
1,822,238	+		CCNA_01694	0.27	+0.3
1,822,248	+		CCNA_01694	0.27	+0.3
1,822,248	+		CCNA_01694	0.27	+0.4
1,822,256	+		CCNA_01694	0.27	+0.5
1,822,256	-		CCNA_01694	0.27	-0.4
1,822,256	-		CCNA_01694	0.27	-0.1
1,822,256	-		CCNA_01694	0.27	-1.4
1,822,256	-		CCNA_01694	0.27	+0.4
1,822,256	-		CCNA_01694	0.27	-2.4
1,822,264	-		CCNA_01694	0.28	-0.2
1,822,308	+		CCNA_01694	0.30	+0.5
1,822,311	-		CCNA_01694	0.30	+0.4
1,822,315	+		CCNA_01694	0.31	-0.7
1,822,316	-		CCNA_01694	0.31	-0.7
1,822,378	-		CCNA_01694	0.34	+0.5
1,822,378	-		CCNA_01694	0.34	+0.8
1,822,488	+		CCNA_01694	0.39	+0.1
1,822,548	+		CCNA_01694	0.43	+0.5
1,822,553	+		CCNA_01694	0.43	+0.3
1,822,553	+		CCNA_01694	0.43	+1.4
1,822,553	+		CCNA_01694	0.43	-0.8
1,822,553	+		CCNA_01694	0.43	-1.6
1,822,561	-		CCNA_01694	0.43	+0.5
1,822,561	-		CCNA_01694	0.43	+0.3
1,822,561	-		CCNA_01694	0.43	+0.1
1,822,592	+		CCNA_01694	0.45	-0.1
1,822,600	-		CCNA_01694	0.45	-1.1
1,822,600	-		CCNA_01694	0.45	+0.8
1,822,618	-		CCNA_01694	0.46	+0.9
1,822,626	+		CCNA_01694	0.47	-2.0
1,822,664	-		CCNA_01694	0.49	-0.4
1,822,687	-		CCNA_01694	0.50	-1.7
1,822,714	+		CCNA_01694	0.51	-0.7
1,822,728	+		CCNA_01694	0.52	-0.2
1,822,749	-		CCNA_01694	0.53	+0.0
1,822,835	-		CCNA_01694	0.57	+0.5
1,822,845	-		CCNA_01694	0.58	-0.7
1,822,845	-		CCNA_01694	0.58	+0.2
1,822,852	-		CCNA_01694	0.58	+0.3
1,822,915	+		CCNA_01694	0.62	+0.7
1,822,917	+		CCNA_01694	0.62	-0.3
1,822,917	+		CCNA_01694	0.62	-0.5
1,822,942	-		CCNA_01694	0.63	+0.7
1,822,948	+		CCNA_01694	0.63	-0.3
1,822,958	+		CCNA_01694	0.64	-0.4
1,823,015	+		CCNA_01694	0.67	-0.0
1,823,015	+		CCNA_01694	0.67	-1.7
1,823,025	+		CCNA_01694	0.67	+0.4
1,823,025	+		CCNA_01694	0.67	-1.8
1,823,089	-		CCNA_01694	0.71	+1.8
1,823,096	+		CCNA_01694	0.71	-0.7
1,823,172	+		CCNA_01694	0.75	-0.4
1,823,180	+		CCNA_01694	0.75	+0.0
1,823,188	-		CCNA_01694	0.76	+0.2
1,823,188	-		CCNA_01694	0.76	-0.3
1,823,191	+		CCNA_01694	0.76	+1.3
1,823,198	-		CCNA_01694	0.76	+0.2
1,823,210	-		CCNA_01694	0.77	-0.1
1,823,216	+		CCNA_01694	0.77	-1.3
1,823,327	-		CCNA_01694	0.83	-0.8
1,823,334	-		CCNA_01694	0.83	-0.7
1,823,334	-		CCNA_01694	0.83	-0.4
1,823,398	+		CCNA_01694	0.87	-0.4
1,823,428	+		CCNA_01694	0.88	+0.6
1,823,428	+		CCNA_01694	0.88	+0.0
1,823,440	+		CCNA_01694	0.89	-0.4
1,823,450	-		CCNA_01694	0.89	-2.7
1,823,478	+				+0.1
1,823,538	+				+1.0
1,823,556	+				+0.1
1,823,613	+				+0.3
1,823,620	+				-0.3
1,823,620	+				+1.2
1,823,620	+				+0.3
1,823,620	+				-0.8
1,823,626	-				+0.1
1,823,628	-				-1.0
1,823,673	-				+0.1
1,823,675	+				-0.4
1,823,678	-				-0.1
1,823,683	-				+0.2
1,823,683	-				-0.3
1,823,683	-				+0.9
1,823,698	+				+1.9
1,823,698	+				+0.2
1,823,706	-				+0.9
1,823,710	-				-0.2
1,823,729	+				+0.9
1,823,729	+				-0.3
1,823,736	+				+1.5
1,823,754	-				+1.3
1,823,766	-				-0.5
1,823,772	-				+0.1
1,823,796	-				-0.1
1,823,799	+				-0.1
1,823,818	+				-1.2
1,823,825	+				+0.7
1,823,880	-				+1.3
1,823,962	+				+0.4
1,823,976	+		CCNA_01695	0.10	-0.1
1,823,995	+		CCNA_01695	0.11	+0.4
1,824,012	-		CCNA_01695	0.12	+0.0
1,824,026	+		CCNA_01695	0.12	+0.8
1,824,087	+		CCNA_01695	0.14	-0.7
1,824,090	-		CCNA_01695	0.14	-0.0
1,824,131	-		CCNA_01695	0.16	-0.5
1,824,138	-		CCNA_01695	0.16	-1.3
1,824,162	-		CCNA_01695	0.17	-0.3
1,824,175	-		CCNA_01695	0.17	-2.2
1,824,184	+		CCNA_01695	0.17	-1.5
1,824,202	-		CCNA_01695	0.18	+0.8
1,824,220	+		CCNA_01695	0.19	+0.5
1,824,269	+		CCNA_01695	0.20	+1.9
1,824,276	+		CCNA_01695	0.21	-0.8
1,824,276	+		CCNA_01695	0.21	+0.3
1,824,342	-		CCNA_01695	0.23	-0.2
1,824,357	-		CCNA_01695	0.23	+0.9
1,824,357	-		CCNA_01695	0.23	+0.7
1,824,380	-		CCNA_01695	0.24	-0.5
1,824,420	+		CCNA_01695	0.26	-0.2
1,824,428	-		CCNA_01695	0.26	-0.7
1,824,435	+		CCNA_01695	0.26	-0.4
1,824,438	-		CCNA_01695	0.26	+0.3
1,824,448	+		CCNA_01695	0.26	-1.6
1,824,456	-		CCNA_01695	0.27	-0.6
1,824,462	+		CCNA_01695	0.27	+0.3
1,824,470	-		CCNA_01695	0.27	-1.3
1,824,475	-		CCNA_01695	0.27	-1.5
1,824,475	-		CCNA_01695	0.27	-0.7
1,824,513	+		CCNA_01695	0.29	-0.9
1,824,514	+		CCNA_01695	0.29	-0.1
1,824,517	+		CCNA_01695	0.29	+0.6
1,824,521	-		CCNA_01695	0.29	-1.5
1,824,578	+		CCNA_01695	0.31	-0.7
1,824,586	-		CCNA_01695	0.31	-0.1
1,824,586	-		CCNA_01695	0.31	-1.2